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ON809756.1__WDS50859.1__Salfasec13b_009__00009

Bact-Vir

ON809756.1__WDS50859.1__Salfasec13b_009__00009

Identity

Accession:
ON809756 ↗
Kingdom:
phage

Quality

94.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lederbergvirus› Salmonella_phage_Salfasec13b

TaxID: 2880992

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-135
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4zkpA01 1.20.5.340 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.95 72.0 8.19e-01 78.8% 100.0%
4linD01 1.20.5.340 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.92 83.0 8.06e-01 96.2% 85.4%
1qu7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.70 65.0 5.33e-01 99.2% 72.2%
2q12A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.65 47.0 3.77e-01 73.5% 85.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3782602 4177.1.1.27 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_4 0.58 48.0 3.69e-01 90.2% 47.5%
D2 high residues 141-208
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pohA02 6.10.140.940 Special › Helix non-globular › Helix Hairpins › 0.95 91.0 8.66e-01 100.0% 88.3%
6nyyE01 1.20.58.760 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 0.64 51.0 3.70e-01 83.8% 78.6%
2gumA02 1.20.5.1890 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 44.0 3.85e-01 86.8% 67.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3237522 2003.1.5.36 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Gcd10p 0.70 53.0 3.60e-01 80.9% 62.4%
3404158 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.68 48.0 4.10e-01 75.0% 100.0%
4215479 7574.1.1.4 ↗ a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › POR_N 0.55 48.0 3.26e-01 98.5% 94.9%