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ON814135.1__UVT34812.1__X__00064
Bact-VirON814135.1__UVT34812.1__X__00064
Identity
- Accession:
- ON814135 ↗
- Kingdom:
- phage
Quality
83.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Silviavirus›
Staphylococcus_phage_vB_SauM-V1SA20
TaxID: 2972386
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-60
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09643.16 best | YopX | 25.3 | 1.80e-05 | 100.0% | 50.0% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vq8T00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 53.0 | 4.24e-01 | 82.1% | 49.6% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 53.0 | 4.72e-01 | 82.1% | 90.0% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 46.0 | 4.55e-01 | 78.6% | 80.6% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 47.0 | 4.21e-01 | 82.1% | 67.4% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 48.0 | 5.08e-01 | 98.2% | 100.0% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 44.0 | 4.04e-01 | 75.0% | 85.5% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 52.0 | 5.08e-01 | 94.6% | 91.9% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 46.0 | 4.12e-01 | 82.1% | 71.1% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 48.0 | 4.56e-01 | 100.0% | 72.7% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 45.0 | 3.65e-01 | 85.7% | 44.8% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 48.0 | 4.73e-01 | 100.0% | 80.6% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 45.0 | 3.54e-01 | 83.9% | 42.0% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.59 | 46.0 | 4.72e-01 | 94.6% | 94.4% |
| 7oiyA01 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 45.0 | 3.11e-01 | 89.3% | 30.7% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.57 | 40.0 | 3.86e-01 | 76.8% | 72.7% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 41.0 | 3.69e-01 | 100.0% | 52.9% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 43.0 | 3.70e-01 | 82.1% | 97.8% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 41.0 | 3.66e-01 | 83.9% | 59.8% |
| 4l8hB00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.55 | 32.0 | 2.48e-01 | 100.0% | 25.2% |
| 1zc1A01 | 2.40.40.50 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain | 0.54 | 44.0 | 3.63e-01 | 96.4% | 49.5% |
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 36.0 | 3.29e-01 | 75.0% | 85.2% |
| 2v3aA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 3.16e-01 | 98.2% | 80.8% |
| 2j5uA03 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.51 | 40.0 | 3.68e-01 | 100.0% | 63.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032123 | 4112.1.1.1 ↗ | beta duplicates or obligate multimers › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX | 0.82 | 70.0 | 6.87e-01 | 100.0% | 88.3% |
| 4668201 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 52.0 | 5.49e-01 | 73.2% | 84.0% |
| 4169657 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.75 | 53.0 | 5.58e-01 | 75.0% | 86.0% |
| 3675341 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.73 | 53.0 | 5.39e-01 | 78.6% | 83.6% |
| 4252943 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.72 | 51.0 | 5.35e-01 | 75.0% | 86.0% |
| 3436022 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.72 | 52.0 | 5.33e-01 | 78.6% | 83.6% |
| 4534931 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.72 | 52.0 | 4.77e-01 | 100.0% | 58.7% |
| 4585317 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.71 | 52.0 | 5.27e-01 | 100.0% | 80.0% |
| 4957888 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.71 | 53.0 | 5.19e-01 | 100.0% | 75.0% |
| 4583465 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.71 | 50.0 | 5.22e-01 | 75.0% | 86.0% |
| 5017637 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.71 | 50.0 | 5.06e-01 | 75.0% | 76.4% |
| 4304846 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.69 | 55.0 | 4.55e-01 | 87.5% | 68.0% |
| 5023831 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 51.0 | 4.78e-01 | 80.4% | 92.9% |
| 3590784 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.69 | 50.0 | 4.83e-01 | 78.6% | 67.7% |
| 4147290 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.67 | 48.0 | 4.67e-01 | 82.1% | 67.7% |
| 3315510 | 4.1.1.246 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin | 0.65 | 48.0 | 3.96e-01 | 82.1% | 80.9% |
| 4059465 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 46.0 | 4.42e-01 | 78.6% | 73.5% |
| 4516378 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.65 | 49.0 | 4.62e-01 | 83.9% | 71.4% |
| 2426920 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.63 | 44.0 | 4.48e-01 | 75.0% | 91.1% |
| 3938261 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.63 | 53.0 | 3.90e-01 | 94.6% | 36.0% |
| 2550473 | 3820.1.1.0 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain | 0.61 | 50.0 | 4.59e-01 | 100.0% | 84.8% |
| 3388074 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 45.0 | 3.93e-01 | 82.1% | 58.9% |
| 4420340 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.96e-01 | 100.0% | 88.3% |
| 4998113 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.60 | 41.0 | 4.33e-01 | 71.4% | 100.0% |
| 5078464 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 39.0 | 4.07e-01 | 71.4% | 93.3% |
| 3210897 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 48.0 | 4.30e-01 | 98.2% | 76.5% |
| 3181766 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.57 | 47.0 | 4.38e-01 | 100.0% | 72.0% |
| 3948255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 3.75e-01 | 100.0% | 47.7% |
| 3700770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 4.69e-01 | 98.2% | 95.0% |
| 3743614 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.55 | 43.0 | 4.29e-01 | 92.9% | 96.7% |
| 4048663 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.55 | 40.0 | 4.33e-01 | 100.0% | 100.0% |
| 3328404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 4.12e-01 | 80.4% | 84.9% |
| 3170404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 44.0 | 3.84e-01 | 100.0% | 69.0% |
| 4955320 | 375.1.1.329 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TackOD1 | 0.54 | 39.0 | 4.28e-01 | 78.6% | 100.0% |
| 3607772 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.53 | 38.0 | 3.45e-01 | 78.6% | 91.3% |
| 3937771 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.52 | 39.0 | 2.67e-01 | 82.1% | 22.4% |
| 4024054 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 37.0 | 3.92e-01 | 82.1% | 90.0% |