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ON854455.1__UUG68577.1__YPHTV1_00015__00015
Bact-VirON854455.1__UUG68577.1__YPHTV1_00015__00015
Identity
- Accession:
- ON854455 ↗
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-69
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ragA02 | 1.10.10.430 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphatase 2C, C-terminal domain suprefamily | 0.71 | 54.0 | 5.44e-01 | 97.0% | 79.4% |
| 1m12A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.67 | 58.0 | 5.37e-01 | 97.0% | 90.5% |
| 2pejA00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.65 | 47.0 | 3.95e-01 | 95.5% | 45.9% |
| 2gxaE01 | 1.10.10.510 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain | 0.64 | 48.0 | 4.71e-01 | 90.9% | 74.0% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 45.0 | 4.38e-01 | 98.5% | 70.8% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.61 | 43.0 | 3.96e-01 | 97.0% | 56.2% |
| 1l9lA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.59 | 49.0 | 4.82e-01 | 97.0% | 93.2% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.59 | 38.0 | 3.96e-01 | 77.3% | 70.5% |
| 1nklA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.58 | 48.0 | 4.61e-01 | 95.5% | 87.2% |
| 3i9v104 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.57 | 48.0 | 4.21e-01 | 98.5% | 95.1% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 4.18e-01 | 97.0% | 98.0% |
| 2of7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 46.0 | 3.69e-01 | 93.9% | 70.0% |
| 3itfA00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 44.0 | 3.72e-01 | 87.9% | 79.3% |
| 1y0uA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 35.0 | 3.18e-01 | 83.3% | 47.2% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 46.0 | 4.39e-01 | 98.5% | 79.5% |
| 1q2lA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 42.0 | 3.10e-01 | 98.5% | 59.6% |
| 2e6oA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.53 | 40.0 | 3.67e-01 | 83.3% | 62.1% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 41.0 | 3.63e-01 | 92.4% | 78.4% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.50 | 41.0 | 3.38e-01 | 95.5% | 97.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3261605 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.66 | 59.0 | 5.50e-01 | 97.0% | 96.2% |
| 1566530 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.66 | 58.0 | 5.42e-01 | 97.0% | 95.1% |
| 3269593 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.66 | 59.0 | 5.54e-01 | 98.5% | 96.2% |
| 3628499 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 47.0 | 4.13e-01 | 98.5% | 50.0% |
| 3252439 | 198.1.1.10 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin | 0.65 | 56.0 | 5.31e-01 | 95.5% | 93.8% |
| 3528233 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 48.0 | 4.62e-01 | 78.8% | 97.3% |
| 3277060 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.63 | 55.0 | 5.28e-01 | 98.5% | 98.7% |
| 3608246 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.62 | 42.0 | 4.47e-01 | 86.4% | 83.6% |
| 3248091 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.62 | 54.0 | 4.99e-01 | 98.5% | 90.6% |
| 3274434 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.62 | 54.0 | 4.98e-01 | 98.5% | 91.8% |
| 3273958 | 198.1.1.10 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin | 0.62 | 54.0 | 5.02e-01 | 98.5% | 90.6% |
| 3933926 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 42.0 | 4.25e-01 | 98.5% | 72.3% |
| 3977558 | 639.2.1.3 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › BDM | 0.61 | 46.0 | 4.93e-01 | 87.9% | 100.0% |
| 3300095 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.59 | 43.0 | 4.36e-01 | 97.0% | 78.5% |
| 3948672 | 639.2.1.1 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB | 0.59 | 44.0 | 4.73e-01 | 92.4% | 100.0% |
| 4009705 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.58 | 46.0 | 4.81e-01 | 93.9% | 100.0% |
| 4351860 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.57 | 50.0 | 3.85e-01 | 100.0% | 54.5% |
| 3566066 | 198.1.1.8 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapA+SapB_2+SapB_1 | 0.55 | 47.0 | 3.30e-01 | 100.0% | 41.5% |
| 3927705 | 210.1.2.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › CBAH,NAAA-beta | 0.55 | 43.0 | 2.73e-01 | 87.9% | 38.6% |
| 3297949 | 592.7.1.2 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › PWI | 0.55 | 41.0 | 4.16e-01 | 81.8% | 100.0% |
| 4569058 | 105.1.1.8 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › Kri1 | 0.55 | 40.0 | 3.35e-01 | 78.8% | 70.8% |
| 3238821 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.54 | 37.0 | 3.45e-01 | 71.2% | 57.6% |
| 3959609 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.53 | 34.0 | 3.06e-01 | 77.3% | 43.9% |
| 3286870 | 191.1.1.15 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_11 | 0.53 | 39.0 | 3.23e-01 | 78.8% | 49.2% |
| 3862340 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.51 | 37.0 | 3.63e-01 | 80.3% | 68.0% |
| 5079733 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 4.23e-01 | 100.0% | 89.3% |
| 3506153 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.51 | 37.0 | 3.51e-01 | 83.3% | 62.7% |
| 3579249 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 40.0 | 3.77e-01 | 93.9% | 74.1% |
D2
medium
residues 73-108
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7jplA01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 48.0 | 3.44e-01 | 91.7% | 29.9% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 50.0 | 3.06e-01 | 100.0% | 14.4% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 48.0 | 3.95e-01 | 91.7% | 52.1% |
| 2ac2A01 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 50.0 | 3.23e-01 | 94.4% | 99.4% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.59 | 47.0 | 4.41e-01 | 100.0% | 70.8% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 43.0 | 3.01e-01 | 88.9% | 60.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266211 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.66 | 48.0 | 4.33e-01 | 77.8% | 58.0% |
| None | — | 0.62 | 51.0 | 3.00e-01 | 100.0% | 11.7% | |
| 3407017 | 130.1.1.2 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM | 0.59 | 47.0 | 4.50e-01 | 97.2% | 100.0% |