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ON854455.1__UUG68591.1__YPHTV1_00029__00029
Bact-VirON854455.1__UUG68591.1__YPHTV1_00029__00029
Identity
- Accession:
- ON854455 ↗
- Kingdom:
- phage
Quality
76.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-106
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l1wA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.63 | 56.0 | 3.69e-01 | 100.0% | 37.1% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.63 | 47.0 | 4.87e-01 | 82.0% | 89.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 4.94e-01 | 98.4% | 87.3% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 50.0 | 2.96e-01 | 91.8% | 39.8% |
| 2vsmA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.61 | 50.0 | 3.11e-01 | 96.7% | 26.9% |
| 4ak1A02 | 2.30.30.1270 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.48e-01 | 100.0% | 76.6% |
| 3irbA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 41.0 | 4.05e-01 | 73.8% | 64.7% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 39.0 | 3.38e-01 | 75.4% | 41.0% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 41.0 | 3.99e-01 | 75.4% | 75.0% |
| 4emtA02 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.58 | 39.0 | 3.11e-01 | 98.4% | 32.1% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 38.0 | 3.83e-01 | 70.5% | 68.8% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.57 | 44.0 | 2.92e-01 | 90.2% | 95.8% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 40.0 | 3.90e-01 | 100.0% | 66.2% |
| 2xzmE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 39.0 | 3.30e-01 | 75.4% | 52.6% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.57 | 42.0 | 3.53e-01 | 100.0% | 45.5% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.57 | 50.0 | 3.31e-01 | 100.0% | 31.1% |
| 2c9kA03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.56 | 44.0 | 3.21e-01 | 90.2% | 68.2% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 44.0 | 3.36e-01 | 88.5% | 61.1% |
| 2kxgA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 42.0 | 3.73e-01 | 100.0% | 53.7% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 47.0 | 3.74e-01 | 95.1% | 93.9% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.56 | 45.0 | 2.83e-01 | 91.8% | 34.9% |
| 3fgqA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 39.0 | 2.86e-01 | 77.0% | 35.7% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.55 | 47.0 | 3.76e-01 | 100.0% | 95.4% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 43.0 | 3.73e-01 | 93.4% | 52.8% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 41.0 | 3.16e-01 | 85.2% | 74.4% |
| 3iayA01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 37.0 | 3.21e-01 | 73.8% | 44.9% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 40.0 | 3.35e-01 | 83.6% | 69.6% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.54 | 45.0 | 3.62e-01 | 100.0% | 85.3% |
| 3qooA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 40.0 | 3.21e-01 | 83.6% | 73.1% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 35.0 | 3.37e-01 | 72.1% | 55.1% |
| 4p2iA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 36.0 | 2.96e-01 | 70.5% | 40.2% |
| 7mwzD01 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.53 | 36.0 | 2.73e-01 | 73.8% | 26.7% |
| 4iykA02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 3.71e-01 | 100.0% | 94.9% |
| 2kqfA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 37.0 | 3.29e-01 | 75.4% | 59.4% |
| 3ednA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 42.0 | 3.28e-01 | 98.4% | 80.5% |
| 1x05A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 43.0 | 3.51e-01 | 100.0% | 58.9% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.51 | 35.0 | 3.17e-01 | 75.4% | 100.0% |
| 2cduA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.51 | 36.0 | 3.10e-01 | 78.7% | 48.7% |
| 2zbbA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 36.0 | 3.32e-01 | 77.0% | 69.1% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4955671 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.75 | 50.0 | 4.54e-01 | 72.1% | 52.5% |
| 3925915 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.70 | 51.0 | 5.53e-01 | 100.0% | 96.0% |
| 3996695 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.69 | 51.0 | 5.34e-01 | 100.0% | 87.3% |
| 5018717 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 49.0 | 5.11e-01 | 77.0% | 100.0% |
| 3230100 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 50.0 | 5.27e-01 | 100.0% | 87.3% |
| 3819309 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.65 | 48.0 | 4.34e-01 | 100.0% | 57.6% |
| 3716770 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.65 | 44.0 | 3.68e-01 | 73.8% | 41.0% |
| 3614906 | 4.26.1.8 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2 | 0.65 | 49.0 | 4.68e-01 | 82.0% | 84.3% |
| 3240661 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 55.0 | 3.82e-01 | 100.0% | 45.5% |
| 3648779 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.63 | 54.0 | 4.23e-01 | 98.4% | 68.1% |
| 3935534 | 375.1.9.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › SANTA | 0.63 | 44.0 | 3.48e-01 | 77.0% | 34.1% |
| 4934626 | 243.3.1.52 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 | 0.63 | 47.0 | 4.06e-01 | 83.6% | 50.0% |
| 5076829 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.63 | 43.0 | 3.83e-01 | 70.5% | 85.7% |
| 3700323 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 43.0 | 4.54e-01 | 75.4% | 92.7% |
| 3593482 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.62 | 42.0 | 3.57e-01 | 73.8% | 43.0% |
| 4997962 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.61 | 51.0 | 3.42e-01 | 96.7% | 68.5% |
| 3666058 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.61 | 42.0 | 3.68e-01 | 72.1% | 46.3% |
| 3522960 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 40.0 | 3.10e-01 | 70.5% | 29.0% |
| 3557649 | 4.8.1.20 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N | 0.61 | 47.0 | 4.01e-01 | 95.1% | 50.5% |
| 3821402 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 42.0 | 3.45e-01 | 72.1% | 78.2% |
| 3617004 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 51.0 | 4.24e-01 | 100.0% | 56.5% |
| 4979057 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 41.0 | 3.62e-01 | 70.5% | 48.9% |
| 3911618 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.60 | 39.0 | 2.86e-01 | 70.5% | 23.4% |
| 3750522 | 4.1.1.218 ↗ | beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N | 0.59 | 45.0 | 3.81e-01 | 85.2% | 47.3% |
| 4505972 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 43.0 | 2.78e-01 | 82.0% | 16.2% |
| 3258054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 3.44e-01 | 83.6% | 60.0% |
| 3871082 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 39.0 | 3.00e-01 | 72.1% | 30.0% |
| 3429608 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.57 | 40.0 | 2.27e-01 | 93.4% | 5.5% |
| 3828738 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.57 | 48.0 | 3.67e-01 | 100.0% | 73.5% |
| 3508084 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.57 | 49.0 | 4.47e-01 | 100.0% | 71.8% |
| 3261530 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.56 | 38.0 | 2.44e-01 | 70.5% | 12.9% |
| 3427044 | 4.1.1.36 ↗ | beta barrels › SH3 › SH3 › SH3 › FeThRed_A | 0.56 | 42.0 | 3.78e-01 | 83.6% | 75.6% |
| 3619212 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.56 | 43.0 | 2.86e-01 | 100.0% | 18.1% |
| 3741555 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.56 | 38.0 | 2.62e-01 | 73.8% | 19.1% |
| 3876143 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.56 | 42.0 | 3.30e-01 | 83.6% | 40.0% |
| 4442061 | 243.3.1.52 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 | 0.55 | 48.0 | 2.91e-01 | 100.0% | 91.3% |
| 145843 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.55 | 43.0 | 3.73e-01 | 93.4% | 52.8% |
| 5044388 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 41.0 | 4.32e-01 | 98.4% | 100.0% |
| 5022323 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 45.0 | 4.48e-01 | 96.7% | 93.8% |
| None | — | 0.54 | 34.0 | 2.56e-01 | 70.5% | 22.9% | |
| None | — | 0.54 | 45.0 | 3.75e-01 | 100.0% | 72.5% | |
| 3824181 | 375.1.1.21 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 | 0.54 | 40.0 | 4.07e-01 | 83.6% | 88.3% |
| 3907178 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 44.0 | 3.81e-01 | 100.0% | 82.9% |
| 3352484 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.52 | 44.0 | 2.78e-01 | 100.0% | 81.6% |
| 3601880 | 220.1.1.15 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 | 0.52 | 44.0 | 3.55e-01 | 100.0% | 48.5% |
| 3467829 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 37.0 | 2.51e-01 | 78.7% | 28.5% |
| 3218749 | 295.1.1.4 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain | 0.51 | 32.0 | 3.22e-01 | 78.7% | 61.7% |
| 4015423 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.51 | 41.0 | 2.66e-01 | 100.0% | 17.1% |
| 3458138 | 375.1.1.131 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF702 | 0.51 | 38.0 | 3.76e-01 | 83.6% | 100.0% |
| 4878112 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.51 | 41.0 | 3.57e-01 | 95.1% | 56.3% |
| 4602887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 33.0 | 3.23e-01 | 72.1% | 58.1% |