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ON857940.1__UVN14205.1__FBPa47_0080__00075
Bact-VirON857940.1__UVN14205.1__FBPa47_0080__00075
Identity
- Accession:
- ON857940 ↗
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Taxonomy
TaxID: 2969619
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-48
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3er6A00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.76 | 47.0 | 3.05e-01 | 93.8% | 15.6% |
| 5owcA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.66 | 46.0 | 3.43e-01 | 75.0% | 30.3% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.66 | 44.0 | 3.15e-01 | 95.8% | 22.3% |
| 1yg2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 41.0 | 3.55e-01 | 97.9% | 40.5% |
| 4fymF00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 47.0 | 3.08e-01 | 85.4% | 18.7% |
| 5o60I00 | 3.30.70.1730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain | 0.62 | 49.0 | 3.82e-01 | 97.9% | 57.1% |
| 2x51A06 | 3.30.70.1590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 47.0 | 4.29e-01 | 85.4% | 62.7% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 3.78e-01 | 100.0% | 70.5% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 48.0 | 3.82e-01 | 87.5% | 89.4% |
| 1q8rA00 | 3.30.1330.70 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Holliday junction resolvase RusA | 0.59 | 49.0 | 3.67e-01 | 100.0% | 37.3% |
| 4bgpA01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.59 | 42.0 | 3.16e-01 | 77.1% | 70.1% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 3.58e-01 | 100.0% | 66.2% |
| 4xhpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 46.0 | 3.36e-01 | 100.0% | 42.6% |
| 2hekA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.58 | 49.0 | 3.11e-01 | 100.0% | 65.1% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.58 | 50.0 | 2.96e-01 | 97.9% | 91.0% |
| 2bgcA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.24e-01 | 100.0% | 35.6% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 50.0 | 4.04e-01 | 97.9% | 93.7% |
| 1kgqA01 | 1.10.166.10 | Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain | 0.58 | 41.0 | 3.61e-01 | 77.1% | 51.4% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 46.0 | 2.84e-01 | 85.4% | 27.1% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 47.0 | 3.55e-01 | 100.0% | 40.6% |
| 3k4oA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.58 | 46.0 | 2.89e-01 | 100.0% | 16.2% |
| 4iggB06 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 48.0 | 3.08e-01 | 91.7% | 21.9% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 47.0 | 4.38e-01 | 97.9% | 78.8% |
| 7tjbA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.57 | 49.0 | 3.27e-01 | 100.0% | 41.3% |
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 43.0 | 4.03e-01 | 81.2% | 76.7% |
| 1oltA02 | 1.10.10.920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 42.0 | 3.79e-01 | 100.0% | 55.6% |
| 2x49A04 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.56 | 48.0 | 3.83e-01 | 97.9% | 48.5% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 42.0 | 3.60e-01 | 97.9% | 64.4% |
| 8dgfB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 39.0 | 2.63e-01 | 75.0% | 22.0% |
| 4inaA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 44.0 | 3.03e-01 | 97.9% | 95.4% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.55 | 45.0 | 3.51e-01 | 100.0% | 42.0% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.51e-01 | 85.4% | 46.1% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.55 | 48.0 | 3.48e-01 | 100.0% | 50.0% |
| 3v3kD00 | 1.20.1260.90 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.55 | 45.0 | 3.15e-01 | 93.8% | 29.3% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 3.57e-01 | 91.7% | 49.4% |
| 3bb9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 43.0 | 3.35e-01 | 95.8% | 86.4% |
| 4ofzA01 | 1.20.58.1800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 43.0 | 3.30e-01 | 87.5% | 61.9% |
| 1i7dA02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.54 | 46.0 | 3.18e-01 | 100.0% | 88.9% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.54 | 43.0 | 3.92e-01 | 93.8% | 68.6% |
| 2fnaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 42.0 | 2.97e-01 | 100.0% | 52.2% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 44.0 | 3.65e-01 | 97.9% | 82.7% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.60e-01 | 93.8% | 83.3% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 41.0 | 3.32e-01 | 100.0% | 85.5% |
| 1l8sA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.53 | 46.0 | 3.48e-01 | 100.0% | 74.2% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 43.0 | 3.02e-01 | 100.0% | 26.2% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.53 | 44.0 | 3.17e-01 | 97.9% | 89.7% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 47.0 | 3.59e-01 | 100.0% | 72.5% |
| 4hltA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 42.0 | 3.06e-01 | 100.0% | 73.6% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 3.36e-01 | 91.7% | 84.3% |
| 3gwiA00 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.51 | 42.0 | 2.94e-01 | 93.8% | 73.8% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.50 | 42.0 | 2.54e-01 | 93.8% | 23.5% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 43.0 | 3.32e-01 | 95.8% | 99.1% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3621327 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.69 | 49.0 | 3.10e-01 | 93.8% | 15.7% |
| 4927722 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.65 | 56.0 | 4.35e-01 | 100.0% | 58.2% |
| 4659871 | 3001.1.1.1 ↗ | alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 | 0.64 | 47.0 | 3.73e-01 | 83.3% | 40.0% |
| 5062774 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 48.0 | 3.30e-01 | 85.4% | 98.2% |
| 4224821 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 49.0 | 3.61e-01 | 85.4% | 91.3% |
| 2583940 | 601.7.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas_Csm6_HEPN | 0.62 | 48.0 | 3.24e-01 | 85.4% | 25.9% |
| 4214015 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.61 | 49.0 | 3.78e-01 | 100.0% | 39.1% |
| 3979933 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.60 | 43.0 | 3.48e-01 | 77.1% | 84.2% |
| 5062471 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 46.0 | 3.57e-01 | 85.4% | 94.5% |
| 5040463 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.60 | 46.0 | 2.81e-01 | 83.3% | 14.6% |
| 139279 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 48.0 | 3.82e-01 | 87.5% | 89.4% |
| 3814043 | 101.1.10.21 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C | 0.60 | 50.0 | 3.20e-01 | 100.0% | 28.7% |
| 3244401 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.59 | 47.0 | 3.56e-01 | 87.5% | 47.8% |
| 3273218 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.59 | 51.0 | 4.11e-01 | 100.0% | 51.6% |
| 3828336 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 46.0 | 3.50e-01 | 87.5% | 49.1% |
| 3859550 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 46.0 | 3.43e-01 | 87.5% | 46.7% |
| 4056248 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 49.0 | 3.58e-01 | 100.0% | 34.8% |
| 5028061 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 47.0 | 3.87e-01 | 91.7% | 91.1% |
| 5035493 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 48.0 | 3.68e-01 | 91.7% | 93.3% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 47.0 | 3.58e-01 | 91.7% | 85.2% |
| 3603554 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.57 | 51.0 | 4.12e-01 | 100.0% | 100.0% |
| 4928624 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.57 | 49.0 | 3.30e-01 | 100.0% | 26.3% |
| 3265214 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 47.0 | 3.56e-01 | 91.7% | 97.4% |
| 3202986 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.56 | 44.0 | 3.24e-01 | 85.4% | 98.4% |
| 3485296 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.56 | 47.0 | 3.60e-01 | 91.7% | 95.2% |
| 4565985 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.56 | 48.0 | 2.73e-01 | 100.0% | 9.7% |
| 2798015 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.56 | 47.0 | 2.84e-01 | 100.0% | 16.3% |
| 4457710 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.56 | 49.0 | 3.68e-01 | 100.0% | 97.5% |
| 4585740 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.55 | 49.0 | 3.99e-01 | 100.0% | 57.8% |
| 3575264 | 604.12.1.61 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Clc-like | 0.55 | 45.0 | 3.44e-01 | 91.7% | 38.3% |
| 3973740 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 46.0 | 3.68e-01 | 95.8% | 78.0% |
| 3989440 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.54 | 45.0 | 3.71e-01 | 95.8% | 84.4% |
| 3742998 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.54 | 45.0 | 3.01e-01 | 91.7% | 48.3% |
| 5063713 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.54 | 41.0 | 4.01e-01 | 100.0% | 81.7% |
| 3279636 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.53 | 43.0 | 3.59e-01 | 93.8% | 84.4% |
| 4599024 | 3001.1.1.1 ↗ | alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 | 0.53 | 40.0 | 3.37e-01 | 83.3% | 48.2% |
| 3284225 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.53 | 43.0 | 3.72e-01 | 93.8% | 95.0% |
| 3235218 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.53 | 46.0 | 2.80e-01 | 100.0% | 15.5% |
| 3911250 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.53 | 45.0 | 2.52e-01 | 95.8% | 31.9% |
| 4112182 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.53 | 48.0 | 3.52e-01 | 100.0% | 90.7% |
| 60305 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 47.0 | 3.62e-01 | 100.0% | 74.5% |
| 3232645 | 371.1.1.1 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholip_A2_1 | 0.53 | 46.0 | 3.57e-01 | 100.0% | 80.9% |
| 3644046 | 4120.1.1.0 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP | 0.52 | 42.0 | 3.84e-01 | 89.6% | 100.0% |
| 5078448 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 47.0 | 3.58e-01 | 100.0% | 97.3% |
| 4017372 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 46.0 | 3.49e-01 | 100.0% | 80.9% |
| 3614763 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 47.0 | 3.46e-01 | 100.0% | 51.7% |
| 3781291 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 47.0 | 3.64e-01 | 100.0% | 83.0% |
| 4181293 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 46.0 | 3.52e-01 | 100.0% | 97.3% |
| 3187789 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.52 | 44.0 | 2.67e-01 | 95.8% | 15.5% |
| 3550136 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 46.0 | 3.48e-01 | 100.0% | 68.7% |
| 4940192 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 46.0 | 3.49e-01 | 100.0% | 93.9% |
| 4271212 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 47.0 | 3.43e-01 | 100.0% | 41.5% |
| 4938470 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 45.0 | 3.69e-01 | 100.0% | 56.7% |
| 3240388 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 46.0 | 2.83e-01 | 100.0% | 23.7% |
| 3690513 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 46.0 | 3.31e-01 | 100.0% | 38.3% |
| 3937187 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 46.0 | 3.47e-01 | 100.0% | 88.2% |
| 4858145 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.51 | 43.0 | 2.73e-01 | 100.0% | 62.6% |
| 3712081 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 38.0 | 2.97e-01 | 83.3% | 92.7% |
| 3097754 | 823.1.1.1 ↗ | a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › gpW | 0.50 | 42.0 | 3.80e-01 | 91.7% | 81.5% |
| 3291498 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 44.0 | 3.15e-01 | 100.0% | 65.5% |
| 4096488 | 3291.1.1.52 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Neurensin | 0.50 | 45.0 | 3.26e-01 | 100.0% | 45.4% |
| 4028685 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 44.0 | 3.37e-01 | 100.0% | 98.2% |
D2
medium
residues 51-93
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.87 | 77.0 | 5.70e-01 | 100.0% | 50.0% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.85 | 74.0 | 6.37e-01 | 100.0% | 68.1% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.82 | 69.0 | 6.53e-01 | 95.3% | 86.5% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.80 | 70.0 | 6.19e-01 | 100.0% | 70.3% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.80 | 71.0 | 6.32e-01 | 100.0% | 90.2% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.78 | 68.0 | 6.00e-01 | 100.0% | 67.2% |
| 3r6nA02 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 68.0 | 4.64e-01 | 100.0% | 32.3% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.77 | 56.0 | 5.04e-01 | 93.0% | 56.7% |
| 1kf6C00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.76 | 65.0 | 4.69e-01 | 100.0% | 36.9% |
| 2vxgA02 | 1.10.220.100 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 | 0.75 | 63.0 | 5.06e-01 | 97.7% | 48.2% |
| 3nkuA00 | 1.10.357.170 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.74 | 64.0 | 4.24e-01 | 100.0% | 26.7% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 56.0 | 5.33e-01 | 86.0% | 80.8% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.73 | 61.0 | 5.19e-01 | 97.7% | 56.3% |
| 1zmbA02 | 6.10.170.10 | Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.73 | 51.0 | 5.40e-01 | 81.4% | 88.9% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 57.0 | 5.28e-01 | 100.0% | 75.8% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.69 | 54.0 | 5.34e-01 | 100.0% | 83.7% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 54.0 | 4.45e-01 | 100.0% | 49.0% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 59.0 | 4.91e-01 | 100.0% | 83.3% |
| 3k6tB00 | 1.20.5.4010 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 48.0 | 4.68e-01 | 86.0% | 73.5% |
| 3ce2A01 | 1.20.140.70 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain | 0.65 | 57.0 | 3.90e-01 | 100.0% | 31.8% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 47.0 | 4.13e-01 | 100.0% | 55.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4133362 | 632.11.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › Yae1_N | 0.89 | 79.0 | 6.06e-01 | 100.0% | 45.3% |
| 4465300 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.89 | 79.0 | 6.15e-01 | 100.0% | 47.8% |
| 3260527 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.86 | 75.0 | 4.53e-01 | 100.0% | 17.8% |
| 4801882 | 192.1.1.1 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › MCPsignal | 0.84 | 72.0 | 6.42e-01 | 100.0% | 75.0% |
| 2772104 | 103.1.1.13 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RNA_pol_Rpo13 | 0.83 | 66.0 | 6.58e-01 | 93.0% | 84.1% |
| 3511354 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.83 | 63.0 | 6.50e-01 | 93.0% | 90.0% |
| 3700089 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.82 | 68.0 | 5.98e-01 | 95.3% | 63.1% |
| 3708019 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.79 | 70.0 | 5.11e-01 | 100.0% | 40.0% |
| 5008343 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.78 | 67.0 | 5.08e-01 | 100.0% | 41.0% |
| 3996626 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.77 | 64.0 | 5.17e-01 | 100.0% | 48.3% |
| 4941676 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.75 | 62.0 | 4.21e-01 | 100.0% | 34.3% |
| 3698336 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.72 | 61.0 | 4.99e-01 | 100.0% | 52.9% |
| 4025064 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.71 | 55.0 | 4.99e-01 | 95.3% | 63.1% |
| 3601679 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.69 | 55.0 | 3.96e-01 | 100.0% | 27.7% |
| 3539738 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.67 | 54.0 | 3.49e-01 | 100.0% | 18.2% |