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ON881243.1__UUG68092.1__X__00052

Bact-Vir

ON881243.1__UUG68092.1__X__00052

Identity

Accession:
ON881243 ↗
Kingdom:
phage

Quality

77.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_PK-3

TaxID: 2961841

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 50-101
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m3qA01 3.30.310.40 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.69 59.0 5.04e-01 100.0% 68.5%
3f0zA01 3.30.310.260 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.67 56.0 4.45e-01 96.2% 49.1%
3rlfF02 3.10.650.10 Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like 0.62 47.0 4.12e-01 84.6% 72.0%
1dl5A02 3.55.20.10 Alpha Beta › 3-Layer(bab) Sandwich › Protein-l-isoaspartate O-methyltransferase; Chain: A, domain 2 › Protein-L-isoaspartyl O-methyltransferase, C-terminal domain 0.61 50.0 3.98e-01 96.2% 44.8%
3dsoA00 2.40.10.300 Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K 0.61 42.0 3.94e-01 73.1% 89.4%
4uriA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 51.0 4.89e-01 92.3% 96.6%
4mnkA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.60 50.0 4.67e-01 92.3% 96.9%
3fveA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.60 48.0 3.64e-01 90.4% 100.0%
1owqA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 48.0 4.43e-01 92.3% 98.5%
3mqgA02 2.20.70.110 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 40.0 4.34e-01 76.9% 100.0%
1n7oA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.58 42.0 3.61e-01 78.8% 72.9%
1kfwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 49.0 4.61e-01 96.2% 96.8%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.57 39.0 3.23e-01 100.0% 38.8%
3o44A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 41.0 3.24e-01 86.5% 67.5%
5llwA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 46.0 3.84e-01 98.1% 93.5%
5ao6A01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 39.0 3.33e-01 82.7% 68.4%
4paaA03 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.52 42.0 3.00e-01 98.1% 33.3%
3rkgA01 2.40.128.330 Mainly Beta › Beta Barrel › Lipocalin › 0.52 45.0 3.70e-01 98.1% 80.9%
1y4oA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 44.0 3.57e-01 98.1% 71.2%
2nqlA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 41.0 2.95e-01 94.2% 60.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4255854 4294.1.1.8 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › PF27112 0.80 63.0 6.42e-01 84.6% 98.0%
5075189 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.74 58.0 3.80e-01 82.7% 78.5%
3267814 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.69 61.0 5.06e-01 98.1% 58.9%
5050463 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.67 52.0 4.98e-01 86.5% 80.0%
4019237 304.48.1.37 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 0.66 57.0 3.72e-01 100.0% 56.6%
4504374 5.1.5.213 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF29037 0.65 53.0 3.22e-01 96.2% 99.5%
4477489 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.63 45.0 3.32e-01 100.0% 27.6%
1323679 4294.1.1.1 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.63 43.0 4.66e-01 78.8% 92.7%
3215907 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 52.0 3.38e-01 100.0% 20.4%
5012022 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.57 42.0 3.78e-01 96.2% 56.8%
2800346 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 40.0 4.27e-01 76.9% 95.3%
3222787 390.1.1.7 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_3 0.54 44.0 3.52e-01 94.2% 48.7%
3266341 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.53 46.0 2.94e-01 98.1% 29.6%
3735232 3761.1.1.3 ↗ beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › PUA_NSUN2 0.53 46.0 3.95e-01 100.0% 62.4%
4301925 3018.1.1.1 ↗ a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS 0.50 40.0 3.53e-01 94.2% 87.1%