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ON881243.1__UUG68141.1__X__00101

Bact-Vir

ON881243.1__UUG68141.1__X__00101

Identity

Accession:
ON881243 ↗
Kingdom:
phage

Quality

81.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-52
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 50.0 2.96e-01 80.4% 26.0%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 45.0 3.29e-01 76.5% 24.8%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.65 46.0 3.22e-01 76.5% 21.8%
2b9dA01 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 40.0 4.45e-01 74.5% 82.1%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 44.0 3.19e-01 74.5% 24.8%
1jpyX00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.64 44.0 3.48e-01 74.5% 62.4%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.63 44.0 3.77e-01 76.5% 75.6%
1nltA01 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.63 42.0 3.73e-01 70.6% 47.5%
3q34A00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.62 49.0 3.41e-01 88.2% 44.8%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.62 39.0 4.08e-01 76.5% 72.7%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.61 44.0 3.29e-01 78.4% 42.6%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 46.0 3.68e-01 84.3% 62.7%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.61 41.0 3.78e-01 80.4% 52.1%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 45.0 3.13e-01 84.3% 44.6%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 45.0 3.70e-01 84.3% 63.1%
4bqqB02 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.60 47.0 3.15e-01 86.3% 70.0%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.59 41.0 3.25e-01 72.5% 36.7%
2d8bA01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.59 43.0 3.15e-01 78.4% 56.4%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.59 44.0 3.27e-01 84.3% 95.2%
2z13A00 2.30.29.170 Mainly Beta › Roll › PH-domain like › 0.58 44.0 3.38e-01 82.4% 36.8%
4b6dB00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.58 44.0 4.29e-01 82.4% 77.2%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.58 42.0 2.77e-01 80.4% 72.8%
1nf3C00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 46.0 3.65e-01 96.1% 65.0%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 48.0 3.56e-01 100.0% 90.4%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 3.63e-01 92.2% 72.9%
1cx8A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.56 44.0 2.79e-01 90.2% 31.9%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.56 39.0 2.57e-01 76.5% 42.0%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 41.0 3.25e-01 80.4% 42.5%
2hv2A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 39.0 3.21e-01 74.5% 62.1%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.55 44.0 3.59e-01 94.1% 73.4%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 3.39e-01 84.3% 61.2%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 3.01e-01 92.2% 47.2%
2y7bA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.17e-01 88.2% 34.3%
1yu9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 3.10e-01 94.1% 40.7%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 3.28e-01 92.2% 71.1%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 39.0 3.24e-01 86.3% 73.9%
1buqA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.20e-01 90.2% 72.8%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.53 39.0 2.53e-01 78.4% 29.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 37.0 3.08e-01 82.4% 93.1%
3i3lA02 3.30.390.160 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.53 38.0 3.04e-01 84.3% 63.2%
6jmgB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 3.11e-01 100.0% 62.4%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 40.0 3.44e-01 98.0% 85.4%
4e2xA01 6.20.50.110 Special › Other non-globular › N-terminal domain of TfIIb › Methyltransferase, zinc-binding domain 0.52 37.0 3.75e-01 86.3% 100.0%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 42.0 2.77e-01 100.0% 21.8%
3ga8A00 3.10.20.860 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 40.0 3.84e-01 98.0% 74.6%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 43.0 3.40e-01 96.1% 58.8%
2g2sA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.51 34.0 3.25e-01 70.6% 56.2%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 38.0 3.00e-01 90.2% 69.5%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3447043 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.82 54.0 6.26e-01 90.2% 100.0%
4982831 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.77 56.0 3.21e-01 78.4% 9.1%
3602976 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 46.0 4.55e-01 90.2% 61.8%
4990821 7571.1.1.1 a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N 0.71 52.0 3.28e-01 80.4% 49.5%
3728856 171.1.1.9 alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 0.71 52.0 3.32e-01 78.4% 26.2%
3231216 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 46.0 4.71e-01 92.2% 70.0%
4546371 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.70 59.0 4.55e-01 98.0% 65.8%
4978132 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 51.0 3.83e-01 78.4% 64.8%
4980003 210.1.2.0 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain 0.69 50.0 2.89e-01 80.4% 9.9%
5016315 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.69 58.0 4.50e-01 100.0% 47.2%
4453447 4294.1.1.1 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.69 50.0 3.88e-01 80.4% 71.7%
3609014 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.69 50.0 3.25e-01 82.4% 17.4%
3193261 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.68 49.0 2.94e-01 78.4% 27.0%
3846895 3380.1.1.2 a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Fra10Ac1 0.67 52.0 4.52e-01 86.3% 56.2%
3588750 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.67 49.0 4.36e-01 98.0% 54.7%
3989031 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.66 50.0 3.28e-01 86.3% 29.6%
3741228 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.66 44.0 2.55e-01 70.6% 49.3%
5028346 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 50.0 4.87e-01 98.0% 76.7%
3942790 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.66 45.0 4.20e-01 72.5% 60.0%
3816322 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.65 46.0 2.87e-01 78.4% 23.0%
5071179 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 49.0 4.76e-01 100.0% 75.0%
3607570 4052.1.1.1 beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA_dh_M 0.64 48.0 3.78e-01 86.3% 98.3%
5040847 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 39.0 2.41e-01 74.5% 10.8%
3057477 220.1.1.146 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N 0.62 46.0 3.98e-01 86.3% 51.6%
3927041 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.61 45.0 3.48e-01 82.4% 52.3%
3232550 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 50.0 4.33e-01 100.0% 57.6%
4493573 4964.1.1.2 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.61 49.0 3.42e-01 98.0% 45.5%
4932428 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.61 43.0 3.95e-01 76.5% 80.0%
None 0.60 45.0 3.49e-01 84.3% 48.8%
3586665 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.60 43.0 4.21e-01 78.4% 70.9%
3956463 321.1.1.0 a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase 0.60 48.0 3.12e-01 100.0% 18.8%
1062575 101.1.1.40 alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.60 47.0 3.14e-01 86.3% 69.6%
3725152 376.1.3.11 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-HC5HC2H_2 0.60 45.0 3.47e-01 84.3% 50.4%
3305808 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.59 49.0 2.82e-01 98.0% 70.8%
4602887 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 46.0 4.18e-01 92.2% 64.9%
3834362 3832.1.1.2 alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › PF25968 0.58 49.0 2.85e-01 100.0% 83.6%
3218749 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.58 42.0 4.03e-01 78.4% 80.0%
3174350 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 51.0 4.70e-01 100.0% 87.7%
3452042 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.57 46.0 4.58e-01 100.0% 85.5%
3788285 395.1.1.4 few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › Flocculin_t3 0.56 42.0 4.25e-01 86.3% 100.0%
4043451 3826.1.1.22 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › UPF0236 0.56 46.0 3.17e-01 98.0% 57.9%
4930970 375.1.1.338 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7479 0.55 40.0 4.05e-01 100.0% 81.8%
3915626 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 43.0 3.66e-01 92.2% 69.5%
3947895 4.26.1.4 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › zf-IS66 0.55 41.0 3.83e-01 88.2% 71.4%
4255362 3826.1.1.22 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › UPF0236 0.55 45.0 3.44e-01 98.0% 42.2%
3932435 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.55 47.0 2.85e-01 96.1% 59.1%
3785904 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 46.0 4.70e-01 96.1% 100.0%
4961941 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 42.0 2.56e-01 90.2% 17.4%
5034346 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.54 36.0 2.24e-01 70.6% 24.8%
3828760 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.54 42.0 4.44e-01 98.0% 100.0%
5029082 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 45.0 3.19e-01 100.0% 77.6%
3315173 243.3.1.46 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SWIM 0.53 37.0 3.03e-01 78.4% 36.5%
3645375 386.1.1.117 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.52 35.0 3.09e-01 74.5% 42.6%
4771028 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.52 34.0 3.29e-01 70.6% 57.1%
3824181 375.1.1.21 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.52 37.0 3.58e-01 78.4% 88.3%
3804146 376.1.2.2 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.52 39.0 4.07e-01 92.2% 95.6%
5018717 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 43.0 4.25e-01 100.0% 96.4%
3517867 214.1.1.9 a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.51 40.0 3.05e-01 90.2% 83.8%
3986836 375.1.1.253 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-IS66 0.51 39.0 3.86e-01 100.0% 87.3%
4497101 4312.2.1.0 a+b two layers › RelE-like › YaeB-like › YaeB-like 0.50 39.0 3.41e-01 94.1% 89.9%
5030377 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.50 40.0 3.17e-01 100.0% 81.5%
D2 high residues 72-122
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF01381.29 best HTH_3 34.0 3.40e-08 90.2% 78.2%
PF13560.13 HTH_31 30.9 3.90e-07 90.2% 51.6%
PF04545.23 Sigma70_r4 27.9 1.80e-06 74.5% 72.0%
D3 high residues 124-175
PDB