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ON886116.1__USW22321.1__X__00048

Bact-Vir

ON886116.1__USW22321.1__X__00048

Identity

Accession:
ON886116 ↗
Kingdom:
phage

Quality

69.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_PSP2-22

TaxID: 2961714

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-88
PDB
Domain cluster: rep: MG592609.1__AUR97833.1__NVP1244A_131__00131__D3-84
D2 high residues 152-221
PDB
D3 medium residues 96-151
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nrhB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 38.0 2.86e-01 89.3% 25.0%
1u6zA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.58 41.0 2.92e-01 89.3% 23.5%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 39.0 2.72e-01 89.3% 21.1%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 37.0 2.33e-01 73.2% 41.4%
2ml5A00 3.10.450.410 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 37.0 2.81e-01 96.4% 26.5%
3cygA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.54 42.0 3.39e-01 89.3% 42.9%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 34.0 2.28e-01 82.1% 14.4%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 34.0 2.22e-01 71.4% 65.7%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.50 35.0 2.87e-01 75.0% 40.9%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.50 42.0 3.07e-01 94.6% 95.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3788141 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 34.0 3.15e-01 75.0% 42.7%
4879580 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.53 34.0 2.55e-01 83.9% 24.2%
3171001 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.53 40.0 2.53e-01 91.1% 34.6%
5044559 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 41.0 3.62e-01 85.7% 72.5%
3650282 243.5.1.8 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › DUF7074 0.52 36.0 3.24e-01 76.8% 67.4%
4317535 2484.1.1.41 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.52 41.0 2.72e-01 91.1% 35.3%
3308941 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 39.0 2.75e-01 89.3% 46.3%