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ON922990.1__UUW39829.1__VP14_142__00142

Bact-Vir

ON922990.1__UUW39829.1__VP14_142__00142

Identity

Accession:
ON922990 ↗
Kingdom:
phage

Quality

73.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-58
PDB
D2 high residues 70-118
PDB
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 53.0 4.97e-01 81.6% 66.1%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.70 61.0 4.34e-01 100.0% 40.3%
3c8cB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.69 51.0 3.76e-01 79.6% 30.7%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.68 54.0 3.91e-01 91.8% 33.8%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.67 56.0 3.99e-01 100.0% 75.3%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 51.0 4.51e-01 87.8% 57.7%
8b4hA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 57.0 4.03e-01 100.0% 40.7%
2bz0A00 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.65 53.0 3.67e-01 91.8% 77.4%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.65 47.0 2.86e-01 79.6% 30.4%
2uvaG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.64 48.0 3.42e-01 79.6% 30.9%
1jhnA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 3.25e-01 87.8% 32.3%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.64 48.0 4.05e-01 79.6% 58.7%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 49.0 3.77e-01 89.8% 61.9%
2kvtA00 3.30.730.30 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein 0.64 52.0 4.64e-01 91.8% 67.6%
4i14A02 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.63 51.0 3.82e-01 91.8% 77.0%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 48.0 3.78e-01 89.8% 66.4%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 48.0 4.19e-01 91.8% 56.0%
3md7A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.61 50.0 3.25e-01 100.0% 65.2%
7arcC01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.61 51.0 3.83e-01 100.0% 40.0%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 44.0 2.96e-01 79.6% 43.8%
5wceA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.60 52.0 3.86e-01 98.0% 64.3%
3f02B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 46.0 3.73e-01 87.8% 70.0%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 46.0 2.87e-01 85.7% 24.2%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.59 46.0 3.74e-01 89.8% 75.5%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.58 48.0 3.47e-01 93.9% 89.5%
2fggA01 3.30.160.240 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 0.58 46.0 4.02e-01 87.8% 80.0%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 43.0 2.77e-01 83.7% 43.0%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.57 49.0 3.60e-01 95.9% 52.3%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 48.0 3.64e-01 100.0% 89.8%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.77e-01 100.0% 64.4%
1o97D01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 38.0 2.71e-01 100.0% 20.1%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.55 39.0 3.78e-01 100.0% 66.1%
1sezA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 47.0 3.23e-01 100.0% 27.2%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 41.0 3.79e-01 91.8% 64.5%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 46.0 2.91e-01 98.0% 35.7%
2o95B00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.53 39.0 2.81e-01 85.7% 47.2%
4e9kA00 2.60.120.1350 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 0.53 44.0 2.86e-01 95.9% 54.2%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 40.0 3.36e-01 93.9% 79.2%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 36.0 3.47e-01 93.9% 60.0%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 3.04e-01 100.0% 39.2%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 39.0 3.66e-01 89.8% 64.7%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 38.0 2.74e-01 85.7% 65.9%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.02e-01 95.9% 37.9%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.51 41.0 3.55e-01 100.0% 76.7%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 38.0 2.78e-01 91.8% 55.3%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.50 39.0 3.23e-01 93.9% 61.8%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3228051 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.78 58.0 5.27e-01 79.6% 66.2%
None 0.72 56.0 3.33e-01 83.7% 30.6%
5029914 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.71 55.0 5.40e-01 89.8% 90.9%
5080802 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.70 55.0 5.22e-01 89.8% 88.3%
4958514 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 51.0 4.07e-01 93.9% 40.0%
2771818 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.68 58.0 4.07e-01 100.0% 35.3%
5012583 11.1.4.106 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PEGA 0.68 49.0 3.49e-01 100.0% 25.5%
4043920 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.67 54.0 3.74e-01 91.8% 65.7%
3705431 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 53.0 4.10e-01 89.8% 88.7%
4289183 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.66 53.0 3.76e-01 91.8% 78.5%
3820177 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.65 52.0 3.69e-01 91.8% 77.6%
3496857 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 52.0 4.19e-01 93.9% 44.8%
4942807 4.26.1.0 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.65 47.0 4.50e-01 100.0% 66.1%
5027334 7580.1.1.1 a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.65 52.0 3.54e-01 91.8% 65.4%
5018480 1104.1.1.0 a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain 0.64 51.0 3.67e-01 100.0% 38.3%
3602244 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 49.0 3.57e-01 87.8% 39.6%
4566577 330.16.1.3 a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › CEP19 0.63 52.0 4.37e-01 100.0% 68.4%
4234615 330.4.1.0 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.63 49.0 4.37e-01 89.8% 66.7%
3289254 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.62 53.0 4.37e-01 100.0% 61.1%
4872607 223.1.1.12 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_2 0.62 42.0 3.34e-01 73.5% 36.0%
4336488 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.62 48.0 4.35e-01 87.8% 67.1%
4048220 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.62 49.0 4.22e-01 89.8% 66.3%
4045276 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.61 40.0 2.39e-01 83.7% 8.9%
5042394 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.61 54.0 4.37e-01 100.0% 73.7%
3506512 2.1.1.168 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF1980_C 0.61 46.0 3.90e-01 85.7% 57.8%
3700289 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 47.0 3.51e-01 89.8% 32.3%
4935472 330.4.1.0 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.61 49.0 4.42e-01 91.8% 74.3%
4173765 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.61 45.0 4.05e-01 83.7% 70.7%
3942396 4.1.1.412 beta barrels › SH3 › SH3 › SH3 › DUF1062 0.61 46.0 3.90e-01 87.8% 66.7%
5047479 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 3.71e-01 93.9% 40.0%
5019514 881.2.1.0 a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like 0.60 47.0 3.37e-01 87.8% 88.3%
3170340 2004.1.1.571 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras, MMR_HSR1 0.59 46.0 3.18e-01 87.8% 79.4%
3902618 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 3.88e-01 95.9% 64.8%
3618372 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.59 49.0 3.86e-01 100.0% 63.3%
3507809 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.59 42.0 4.12e-01 87.8% 69.8%
3490957 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 42.0 3.78e-01 81.6% 72.0%
4090939 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.58 45.0 3.98e-01 91.8% 60.0%
5073192 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.57 38.0 3.59e-01 71.4% 58.5%
3978190 375.1.1.311 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF1062 0.57 46.0 3.91e-01 100.0% 53.3%
3509056 221.13.1.0 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.57 45.0 3.56e-01 100.0% 82.4%
4932472 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 45.0 3.72e-01 91.8% 51.6%
4937350 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 42.0 3.93e-01 83.7% 67.7%
3304346 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 41.0 3.78e-01 91.8% 60.0%
3314422 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.55 40.0 3.70e-01 91.8% 60.0%
5052494 246.3.1.10 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos_PGAP2IP 0.54 42.0 2.73e-01 87.8% 22.2%
3960657 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 41.0 3.63e-01 85.7% 68.0%
4978604 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 42.0 3.16e-01 100.0% 92.3%
4977282 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 39.0 2.88e-01 89.8% 82.7%
4862766 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 40.0 3.54e-01 87.8% 58.4%
3507995 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.52 37.0 2.59e-01 83.7% 40.5%
3932703 11.2.1.50 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_GDE1 0.52 41.0 3.47e-01 95.9% 66.0%
3809302 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 38.0 3.41e-01 89.8% 51.8%
3859372 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.51 39.0 3.34e-01 100.0% 60.0%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.51 38.0 3.38e-01 93.9% 53.8%
4870150 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.51 43.0 3.23e-01 100.0% 70.1%