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ON932079.1__UYA98675.1__IVIADoCa5_5__00005
Bact-VirON932079.1__UYA98675.1__IVIADoCa5_5__00005
Identity
- Accession:
- ON932079 ↗
- Kingdom:
- phage
Quality
82.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Mesyanzhinovviridae›
Docaquintavirus›
Xanthomonas_phage_vB_Xar_IVIA-DoCa5
TaxID: 2975532
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-63
Domain cluster:
rep: MT118296.1__QIQ65295.1__19_00008__00008__D6-64
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bt3A01 | 3.30.1900.10 | Alpha Beta › 2-Layer Sandwich › glyoxalase-related enzyme like fold › glyoxalase-related enzyme like domain | 0.57 | 37.0 | 3.56e-01 | 91.8% | 56.9% |
| 6ku8A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 36.0 | 3.52e-01 | 73.8% | 58.0% |
| 7r7cr01 | 2.40.10.310 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 43.0 | 4.15e-01 | 86.9% | 100.0% |
| 2z4dA00 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.54 | 42.0 | 3.78e-01 | 91.8% | 94.8% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 42.0 | 3.67e-01 | 93.4% | 95.2% |
| 6ixyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.51e-01 | 100.0% | 98.5% |
| 3c8cB02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 35.0 | 2.98e-01 | 70.5% | 40.7% |
| 3cloC01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 35.0 | 2.58e-01 | 70.5% | 34.2% |
| 3obqA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.52 | 44.0 | 3.48e-01 | 100.0% | 73.8% |
| 7syvx01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 40.0 | 3.27e-01 | 91.8% | 66.4% |
| 1z1yA01 | 2.90.20.10 | Mainly Beta › Orthogonal Prism › Plasmodium vivax P25 fold › Plasmodium vivax P25 domain | 0.51 | 40.0 | 3.03e-01 | 98.4% | 32.9% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 2.96e-01 | 73.8% | 48.2% |
| 1qftB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 39.0 | 2.96e-01 | 90.2% | 68.0% |
| 4i1kA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.50 | 43.0 | 3.53e-01 | 100.0% | 51.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4971344 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 38.0 | 4.04e-01 | 82.0% | 96.0% |
| 3239567 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.53 | 37.0 | 3.21e-01 | 90.2% | 44.8% |
| 3385861 | 3747.1.1.2 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C | 0.50 | 34.0 | 2.77e-01 | 72.1% | 35.7% |
| 3866981 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.50 | 39.0 | 3.61e-01 | 93.4% | 97.8% |