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ON950054.1__UXQ88821.1__X__00070

Bact-Vir

ON950054.1__UXQ88821.1__X__00070

Identity

Accession:
ON950054 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cbastvirus› Tenacibaculum_phage_Larrie

TaxID: 2968246

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 56-117
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ekaA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.79 52.0 4.65e-01 79.0% 49.4%
4pt4B00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.77 58.0 4.88e-01 79.0% 55.7%
2ndpA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.76 57.0 4.78e-01 79.0% 55.6%
2iieA01 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.73 55.0 4.54e-01 80.6% 50.0%
1owfA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.68 56.0 4.79e-01 88.7% 58.3%
4fmrA02 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.67 48.0 4.24e-01 77.4% 52.3%
2np2A00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.66 53.0 4.51e-01 88.7% 54.9%
3ue3A01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.56 36.0 3.13e-01 74.2% 42.3%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.54 42.0 2.81e-01 85.5% 26.0%
3uwpA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.17e-01 98.4% 89.5%
2fdoA00 3.30.1970.10 Alpha Beta › 2-Layer Sandwich › AF2331-like fold › AF2331-like 0.53 35.0 3.14e-01 83.9% 45.2%
2g1dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 39.0 3.44e-01 80.6% 82.7%
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.52 37.0 2.85e-01 75.8% 35.4%
7qi3A01 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.52 38.0 2.59e-01 87.1% 39.1%
1o6eA00 3.20.16.10 Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain 0.51 41.0 2.95e-01 100.0% 27.1%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4240651 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.78 59.0 4.91e-01 79.0% 54.0%
4681823 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.77 59.0 4.92e-01 80.6% 55.0%
4227571 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.70 59.0 5.03e-01 93.5% 61.0%
1919590 101.17.1.2 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › HU-DNA_bdg 0.68 55.0 4.45e-01 93.5% 46.7%
4508411 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.67 57.0 4.81e-01 93.5% 57.0%
3104378 101.17.1.3 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › HU-CCDC81_euk_1 0.65 42.0 3.80e-01 71.0% 48.3%
3941747 101.1.9.78 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA 0.63 44.0 3.67e-01 83.9% 41.8%
4882343 2003.1.1.59 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_5 0.60 50.0 3.23e-01 98.4% 83.0%
4160692 171.1.1.1 ↗ alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 0.58 42.0 2.88e-01 77.4% 72.0%
4888479 304.114.1.0 ↗ a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.56 42.0 3.04e-01 79.0% 53.8%
3418742 7516.1.1.6 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 0.56 47.0 2.94e-01 98.4% 54.8%
3634106 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.55 41.0 3.19e-01 82.3% 45.3%
3420926 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 37.0 2.35e-01 71.0% 24.7%
3472659 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.54 45.0 3.49e-01 91.9% 58.6%
3633600 2003.1.5.165 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11, Methyltransf_23 0.54 39.0 2.74e-01 83.9% 94.1%
3768112 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.53 42.0 3.06e-01 93.5% 51.0%
3385013 109.21.1.4 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Sec16_C,Sec16 0.53 37.0 2.24e-01 74.2% 89.1%
3651623 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.50 41.0 2.88e-01 100.0% 58.0%