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ON968452.1__UXO93748.1__Pan1_33__00033

Bact-Vir

ON968452.1__UXO93748.1__Pan1_33__00033

Identity

Accession:
ON968452 ↗
Kingdom:
phage

Quality

86.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nanhaivirus› Pseudanabaena_phage_Pan1

TaxID: 2981584

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-187
PDB
Domain cluster: rep: JQ067093.2__ALH23509.1__PaMx74_36__00036__D1104-1231
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00754.32 best F5_F8_type_C 31.9 1.80e-07 69.9% 52.0%
PF22633.4 F5_F8_type_C_2 34.7 3.00e-08 61.6% 70.0%
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.69 49.0 4.85e-01 73.3% 79.5%
1uctA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 32.0 4.00e-01 86.3% 71.4%
1wmxA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.65 50.0 4.73e-01 80.1% 82.7%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 40.0 4.38e-01 75.3% 73.2%
2fnqA01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.64 48.0 5.27e-01 94.5% 100.0%
3km5A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 46.0 4.32e-01 75.3% 83.2%
2esvE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 37.0 4.18e-01 86.3% 78.4%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.60 34.0 4.11e-01 82.2% 85.1%
2cdoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 43.0 4.48e-01 74.0% 79.0%
2vn4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 38.0 4.30e-01 95.9% 82.5%
3mepA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 42.0 3.92e-01 71.2% 82.7%
4kh9A03 2.60.120.1370 Mainly Beta › Sandwich › Jelly Rolls › 0.60 38.0 4.29e-01 78.8% 83.2%
2hczX02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.59 36.0 4.18e-01 84.2% 84.6%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 44.0 3.64e-01 77.4% 58.4%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.58 34.0 3.76e-01 76.0% 70.1%
4b60A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 46.0 4.58e-01 84.9% 78.2%
4bhuA00 2.60.40.3490 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 43.0 4.51e-01 94.5% 89.8%
2dduA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 45.0 4.46e-01 93.8% 80.0%
2zxqA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 39.0 3.84e-01 71.2% 78.0%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 3.84e-01 83.6% 83.3%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 37.0 4.34e-01 93.8% 100.0%
1sq2N00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 4.24e-01 93.8% 91.1%
3uizB00 2.60.40.1570 Mainly Beta › Sandwich › Immunoglobulin-like › Dr adhesin 0.55 43.0 4.45e-01 94.5% 89.6%
1hkfA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 36.0 4.12e-01 93.2% 91.7%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 4.23e-01 92.5% 77.8%
2pn5A10 2.60.40.690 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain 0.54 41.0 4.18e-01 93.8% 81.5%
2lr4A00 2.60.40.2870 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 33.0 3.51e-01 94.5% 69.5%
3f1sB03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 37.0 4.04e-01 100.0% 89.6%
1nfdA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 35.0 3.93e-01 93.8% 89.3%
4nofB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.88e-01 92.5% 90.6%
2jkbA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.47e-01 78.1% 75.5%
2xbtA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.50 42.0 4.16e-01 91.8% 89.9%
2f68X02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 43.0 4.20e-01 94.5% 87.0%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2324084 10.32.1.2 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.86 65.0 6.18e-01 77.4% 75.2%
3904915 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.85 77.0 7.26e-01 93.8% 94.7%
3235471 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.85 76.0 7.51e-01 92.5% 99.3%
3748870 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.84 75.0 7.24e-01 93.2% 98.8%
3715994 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.82 74.0 6.54e-01 93.8% 94.5%
3934331 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.82 74.0 7.15e-01 93.8% 93.8%
3485554 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.82 74.0 6.63e-01 93.8% 84.7%
3568440 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.82 74.0 7.20e-01 95.2% 99.4%
3575575 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.82 73.0 6.84e-01 93.8% 92.6%
3219798 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.82 73.0 7.11e-01 93.8% 91.9%
3699596 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.81 71.0 6.53e-01 92.5% 100.0%
3594435 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.80 70.0 6.16e-01 92.5% 98.1%
3934332 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.79 73.0 6.98e-01 97.9% 92.7%
3748879 10.32.1.105 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.79 70.0 6.99e-01 93.8% 99.3%
3877381 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.78 70.0 6.94e-01 93.8% 99.3%
3568441 11.1.5.81 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF4457 0.77 68.0 6.91e-01 93.8% 100.0%
5033393 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 43.0 4.27e-01 71.9% 80.0%
4157339 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 40.0 4.34e-01 76.7% 80.8%
3451480 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.60 51.0 5.13e-01 90.4% 100.0%
3306124 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.60 50.0 5.06e-01 92.5% 91.0%
1153512 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 36.0 4.23e-01 86.3% 88.7%
3168650 10.1.1.22 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 0.58 42.0 3.86e-01 73.3% 79.3%
4302927 511.1.1.0 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.54 36.0 4.17e-01 97.9% 98.0%
3713401 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 4.01e-01 93.2% 84.6%
2526789 5095.1.1.1 ↗ beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 0.51 38.0 3.55e-01 91.1% 62.7%
3884618 10.32.1.225 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 0.51 38.0 3.53e-01 77.4% 61.7%
4950007 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.51 40.0 4.06e-01 97.3% 84.7%
4027344 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 36.0 3.87e-01 84.9% 89.2%
3992573 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 42.0 3.66e-01 89.7% 83.1%
162810 11.1.5.22 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Collagen_bind 0.50 43.0 4.21e-01 93.8% 86.3%
4960570 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 44.0 3.74e-01 97.3% 99.2%
D2 medium residues 1-37_188-392
PDB
Domain cluster: rep: NC_005178.1__NP_938253.1__D3112p46__00046__D2-182
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 32.0 4.00e-01 90.5% 77.8%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.61 28.0 3.60e-01 87.2% 72.1%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 30.0 3.85e-01 90.1% 78.3%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 31.0 3.70e-01 91.3% 69.5%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 31.0 3.82e-01 90.1% 78.8%
5ay6A01 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.55 32.0 3.69e-01 100.0% 77.2%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 29.0 3.24e-01 82.2% 67.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
6336 331.13.1.1 ↗ a+b two layers › TBP-like › YwmB-like › YwmB-like › DUF1779 0.61 28.0 3.06e-01 87.2% 49.3%
3366063 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.58 34.0 3.92e-01 90.1% 76.1%
6334 331.3.1.7 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.57 30.0 3.71e-01 90.9% 79.6%
3250241 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.56 33.0 3.73e-01 90.1% 74.1%
D3 medium residues 393-497
PDB
Domain cluster: rep: MN536026.1__QIG56895.1__vBPaeSS2019XI_017__00017__D212-313
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hiaA00 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.51 32.0 3.78e-01 82.9% 98.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3519410 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.64 25.0 3.92e-01 71.4% 94.9%
3818230 376.1.2.16 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1-like_CT 0.58 28.0 3.53e-01 73.3% 75.4%
3803107 376.1.2.37 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2, C1-like_CT 0.52 37.0 2.76e-01 96.2% 30.8%