←Back to structures

ON968452.1__UXO93801.1__Pan1_86__00086

Bact-Vir

ON968452.1__UXO93801.1__Pan1_86__00086

Identity

Accession:
ON968452 ↗
Kingdom:
phage

Quality

57.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nanhaivirus› Pseudanabaena_phage_Pan1

TaxID: 2981584

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-92
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cidA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 48.0 4.52e-01 94.6% 57.7%
2cpdA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.69 50.0 4.63e-01 78.6% 100.0%
2x5pA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 47.0 3.85e-01 100.0% 39.4%
3au4A02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.67 56.0 4.87e-01 100.0% 71.3%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 48.0 4.18e-01 78.6% 89.9%
4tweA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.63 49.0 3.28e-01 85.7% 100.0%
4p4tA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 48.0 3.01e-01 85.7% 97.9%
7uzsX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 49.0 3.88e-01 91.1% 63.5%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 50.0 4.52e-01 98.2% 93.9%
2wadA02 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.58 42.0 3.25e-01 85.7% 31.1%
3nqhA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 46.0 3.51e-01 91.1% 56.6%
6u7jA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 3.83e-01 100.0% 53.9%
5xbfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 44.0 4.06e-01 100.0% 72.4%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 3.73e-01 91.1% 72.5%
2kfwA01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 38.0 3.11e-01 73.2% 62.8%
2pn5A02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.56 45.0 3.77e-01 100.0% 51.5%
2a74A02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.56 47.0 3.95e-01 100.0% 54.5%
3bgaA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 42.0 3.58e-01 91.1% 75.2%
5jtwA02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.55 43.0 3.71e-01 92.9% 88.0%
4lesA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 3.32e-01 91.1% 85.2%
3egrA00 3.10.20.520 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B 0.55 45.0 4.40e-01 100.0% 87.3%
2xqyA03 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.55 44.0 3.38e-01 100.0% 38.3%
1a21A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 3.65e-01 91.1% 53.1%
8a28A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 3.25e-01 91.1% 60.6%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.54 42.0 3.23e-01 91.1% 57.7%
2dk6A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.54 40.0 3.58e-01 89.3% 89.4%
6u7iB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.69e-01 94.6% 59.8%
3jxvA02 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 41.0 3.25e-01 85.7% 80.2%
2mf9A00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 41.0 3.01e-01 85.7% 56.7%
3fn9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.39e-01 91.1% 84.2%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 3.29e-01 91.1% 59.5%
4gqzA00 2.60.40.3700 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 2.85e-01 100.0% 29.5%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.52e-01 91.1% 56.3%
2vvfA01 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.36e-01 100.0% 56.7%
5ck3C00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 39.0 3.25e-01 85.7% 77.1%
1wmhA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 40.0 3.65e-01 94.6% 68.7%
2r5oA01 2.70.50.60 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain 0.51 39.0 3.01e-01 91.1% 76.8%
7b7nH01 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.50 40.0 3.29e-01 98.2% 92.1%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 39.0 3.46e-01 94.6% 61.5%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 39.0 2.76e-01 92.9% 81.1%
4bf8A00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.50 39.0 3.17e-01 87.5% 78.6%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4256432 11.1.4.72 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_2nd 0.65 46.0 4.11e-01 100.0% 52.5%
4478723 304.56.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.65 55.0 4.45e-01 94.6% 73.3%
5081326 11.1.1.608 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail 0.62 46.0 4.40e-01 100.0% 69.2%
5034926 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.62 47.0 4.14e-01 100.0% 55.3%
3711718 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 45.0 3.82e-01 94.6% 46.0%
3952771 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 49.0 4.04e-01 91.1% 97.1%
3414008 221.1.1.51 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 0.60 51.0 4.32e-01 100.0% 65.0%
5061304 11.1.1.249 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_9 0.59 42.0 3.76e-01 94.6% 50.0%
3724413 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 3.70e-01 91.1% 81.7%
5073955 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 41.0 3.26e-01 76.8% 37.5%
5032627 11.1.1.284 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.58 41.0 3.73e-01 94.6% 52.9%
4414927 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.58 50.0 4.73e-01 100.0% 88.4%
3601845 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 47.0 3.16e-01 94.6% 24.8%
5070225 11.1.1.15 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD 0.57 41.0 3.66e-01 94.6% 50.0%
2643961 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.56 48.0 3.61e-01 100.0% 55.6%
5042324 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.56 44.0 3.92e-01 100.0% 57.8%
3988217 241.12.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like 0.56 39.0 2.84e-01 96.4% 22.0%
3476844 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 3.62e-01 94.6% 52.2%
4942069 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.68e-01 96.4% 47.3%
5067707 11.1.1.15 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD 0.55 39.0 3.52e-01 94.6% 50.0%
4956425 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 3.95e-01 98.2% 60.0%
3742118 11.1.1.161 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII 0.54 41.0 3.33e-01 100.0% 38.3%
3701633 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 44.0 4.02e-01 100.0% 70.6%
3180640 2492.1.1.1 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.54 45.0 3.37e-01 100.0% 78.8%
3783230 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.54 41.0 3.64e-01 91.1% 90.5%
3772534 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.54 43.0 3.73e-01 87.5% 92.9%
5026423 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 41.0 3.51e-01 91.1% 68.6%
4671861 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.53 42.0 3.58e-01 91.1% 87.0%
274267 10.2.1.87 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › P3_C 0.53 44.0 3.32e-01 98.2% 43.7%
5080295 11.1.1.608 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail 0.53 45.0 3.70e-01 100.0% 53.3%
4302120 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.52 40.0 3.44e-01 91.1% 74.3%
5053230 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 44.0 3.42e-01 92.9% 67.5%
4943482 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 44.0 3.36e-01 100.0% 67.6%
5047112 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 41.0 3.49e-01 91.1% 85.0%
3219058 10.4.1.39 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_4th 0.52 40.0 3.21e-01 100.0% 39.2%
4384880 101.1.14.3 ↗ alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 0.52 45.0 3.96e-01 100.0% 67.1%
3416102 5.1.4.344 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_SCAP 0.51 35.0 2.11e-01 71.4% 20.5%
3601276 2007.2.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.51 42.0 2.71e-01 91.1% 21.9%
5040431 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.69e-01 94.6% 77.6%
4945067 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.50 41.0 3.65e-01 100.0% 82.2%