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ON968452.1__UXO93802.1__Pan1_87__00087
Bact-VirON968452.1__UXO93802.1__Pan1_87__00087
Identity
- Accession:
- ON968452 ↗
- Kingdom:
- phage
Quality
60.8
mean pLDDT
Taxonomy
TaxID: 2981584
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-70
D2
medium
residues 71-121
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fmnA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.95 | 81.0 | 6.62e-01 | 90.2% | 53.5% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.94 | 83.0 | 6.60e-01 | 92.2% | 95.6% |
| 5lbmA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.93 | 74.0 | 6.16e-01 | 88.2% | 51.8% |
| 3dkqA02 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.91 | 70.0 | 7.32e-01 | 86.3% | 89.4% |
| 2xkoC02 | 6.10.250.870 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.89 | 61.0 | 6.92e-01 | 74.5% | 100.0% |
| 1twcA01 | 4.10.860.120 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › RNA polymerase II, clamp domain | 0.88 | 68.0 | 4.89e-01 | 82.4% | 31.8% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.88 | 73.0 | 6.07e-01 | 90.2% | 54.1% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.86 | 70.0 | 7.02e-01 | 90.2% | 86.5% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.82 | 67.0 | 5.12e-01 | 90.2% | 43.0% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 66.0 | 5.23e-01 | 90.2% | 71.8% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.81 | 62.0 | 5.52e-01 | 82.4% | 66.2% |
| 3b0xA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.81 | 64.0 | 5.31e-01 | 86.3% | 67.8% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.78 | 63.0 | 5.02e-01 | 90.2% | 45.5% |
| 3q1pA01 | 6.10.250.1120 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.77 | 53.0 | 5.86e-01 | 72.5% | 100.0% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.76 | 57.0 | 4.85e-01 | 88.2% | 49.4% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 58.0 | 5.27e-01 | 88.2% | 86.3% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 54.0 | 4.98e-01 | 88.2% | 58.8% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.75 | 61.0 | 4.11e-01 | 88.2% | 67.0% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 59.0 | 4.95e-01 | 88.2% | 53.8% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 61.0 | 4.89e-01 | 90.2% | 48.0% |
| 3p42A02 | 6.10.250.2280 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.73 | 56.0 | 5.06e-01 | 84.3% | 64.3% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 59.0 | 4.69e-01 | 94.1% | 79.2% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 55.0 | 5.10e-01 | 86.3% | 97.0% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.71 | 53.0 | 4.14e-01 | 82.4% | 66.1% |
| 1dd9A03 | 1.20.50.20 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle | 0.70 | 54.0 | 5.25e-01 | 88.2% | 74.6% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.70 | 53.0 | 3.76e-01 | 88.2% | 96.0% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.68 | 52.0 | 3.12e-01 | 86.3% | 12.2% |
| 4gbjC02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.67 | 56.0 | 4.09e-01 | 92.2% | 45.2% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 51.0 | 4.54e-01 | 82.4% | 72.2% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.65 | 48.0 | 4.37e-01 | 84.3% | 56.9% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 52.0 | 4.62e-01 | 90.2% | 82.7% |
| 1cpyA02 | 1.10.287.410 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 48.0 | 4.46e-01 | 88.2% | 65.3% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.63 | 45.0 | 4.38e-01 | 82.4% | 69.6% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.63 | 47.0 | 3.71e-01 | 82.4% | 37.8% |
| 7dukB01 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 49.0 | 5.15e-01 | 88.2% | 95.7% |
| 4ehsA00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.61 | 47.0 | 3.73e-01 | 90.2% | 38.7% |
| 4toiA02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 48.0 | 4.92e-01 | 88.2% | 91.7% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 3.34e-01 | 92.2% | 28.6% |
| 3q18A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 45.0 | 3.72e-01 | 94.1% | 74.1% |
| 4dooA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.53 | 42.0 | 3.10e-01 | 92.2% | 49.0% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4237257 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.98 | 84.0 | 6.70e-01 | 90.2% | 51.1% |
| 3403179 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.94 | 78.0 | 5.96e-01 | 88.2% | 42.9% |
| 3575095 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.94 | 80.0 | 7.26e-01 | 90.2% | 70.8% |
| 3950461 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.93 | 81.0 | 6.28e-01 | 92.2% | 86.0% |
| 2546344 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.93 | 77.0 | 7.27e-01 | 90.2% | 75.0% |
| 4878100 | 616.1.1.2 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › WHEP-TRS | 0.92 | 70.0 | 7.65e-01 | 80.4% | 97.6% |
| 4952876 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.91 | 77.0 | 6.18e-01 | 90.2% | 51.1% |
| 4806319 | 3755.1.1.2 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › YscO-like | 0.91 | 76.0 | 6.35e-01 | 90.2% | 55.4% |
| 2926 | 616.1.1.2 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › WHEP-TRS | 0.91 | 71.0 | 7.03e-01 | 84.3% | 79.6% |
| 3963661 | 109.4.1.341 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_21 | 0.90 | 78.0 | 4.99e-01 | 92.2% | 37.1% |
| 3605626 | 192.12.1.0 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM | 0.90 | 75.0 | 5.79e-01 | 90.2% | 43.8% |
| 3954762 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.90 | 76.0 | 6.35e-01 | 92.2% | 100.0% |
| 3973390 | 632.18.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 › DUF4398 | 0.90 | 72.0 | 6.33e-01 | 88.2% | 61.4% |
| 3528706 | 192.29.1.11 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FerA | 0.90 | 78.0 | 5.77e-01 | 96.1% | 70.4% |
| 3318561 | 616.1.1.2 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › WHEP-TRS | 0.90 | 75.0 | 7.32e-01 | 90.2% | 83.6% |
| 3738569 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.89 | 75.0 | 5.78e-01 | 90.2% | 43.8% |
| 3507250 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.89 | 74.0 | 5.73e-01 | 90.2% | 43.8% |
| 4547846 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.89 | 72.0 | 4.53e-01 | 86.3% | 47.4% |
| 4554324 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.88 | 75.0 | 5.90e-01 | 92.2% | 85.0% |
| 3764996 | 11.2.1.77 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › FerA | 0.88 | 77.0 | 5.74e-01 | 96.1% | 73.3% |
| 3423402 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.88 | 73.0 | 6.11e-01 | 90.2% | 54.1% |
| 2833339 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.88 | 73.0 | 6.12e-01 | 90.2% | 55.4% |
| 3705783 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.88 | 73.0 | 5.98e-01 | 90.2% | 51.1% |
| 3504312 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.88 | 73.0 | 5.73e-01 | 90.2% | 46.0% |
| 4026926 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.88 | 73.0 | 5.24e-01 | 90.2% | 34.1% |
| 3682710 | 2004.1.1.529 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, DUF6469 | 0.88 | 72.0 | 4.12e-01 | 90.2% | 9.9% |
| 3304770 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.87 | 72.0 | 4.97e-01 | 90.2% | 28.7% |
| 3293917 | 616.1.1.28 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › RNA_pol_Rpb1_1 | 0.87 | 71.0 | 5.28e-01 | 88.2% | 47.5% |
| 3976632 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.87 | 71.0 | 5.01e-01 | 90.2% | 30.7% |
| 3399433 | 3826.1.1.39 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › WHEP-TRS | 0.86 | 71.0 | 6.38e-01 | 90.2% | 65.7% |
| 4935885 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.86 | 70.0 | 4.20e-01 | 90.2% | 13.7% |
| 3753345 | 609.1.1.0 ↗ | alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase | 0.86 | 71.0 | 5.27e-01 | 88.2% | 37.5% |
| 3660125 | 3711.1.1.4 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DOG1 | 0.86 | 70.0 | 5.88e-01 | 90.2% | 55.3% |
| 3491310 | 3826.1.1.67 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Med10 | 0.85 | 69.0 | 6.03e-01 | 88.2% | 60.0% |
| 3721864 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.84 | 66.0 | 6.05e-01 | 84.3% | 70.8% |
| 3073109 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.84 | 68.0 | 6.01e-01 | 90.2% | 62.2% |
| 3592441 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.84 | 68.0 | 4.74e-01 | 90.2% | 29.4% |
| 4851526 | 609.1.1.1 ↗ | alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › PARP_reg | 0.82 | 67.0 | 4.77e-01 | 90.2% | 33.3% |
| 3928077 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.81 | 72.0 | 5.09e-01 | 98.0% | 63.4% |
| 3221478 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.81 | 68.0 | 5.44e-01 | 94.1% | 77.0% |
| 5002349 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.77 | 60.0 | 5.64e-01 | 88.2% | 75.4% |
| 162110 | 616.1.1.2 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › WHEP-TRS | 0.75 | 61.0 | 5.31e-01 | 92.2% | 79.7% |