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ON968453.1__UXO93855.1__Pan2_36__00036
Bact-VirON968453.1__UXO93855.1__Pan2_36__00036
Identity
- Accession:
- ON968453 ↗
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-55
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 53.0 | 3.59e-01 | 94.4% | 23.9% |
| 4i1sB00 | 4.10.80.340 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.66 | 39.0 | 4.04e-01 | 75.9% | 61.5% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.65 | 45.0 | 4.08e-01 | 94.4% | 51.9% |
| 4p1mB01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.63 | 44.0 | 4.76e-01 | 98.1% | 88.9% |
| 1hkgA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 53.0 | 4.06e-01 | 98.1% | 41.5% |
| 2qu8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 53.0 | 3.64e-01 | 100.0% | 89.7% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.60 | 43.0 | 3.11e-01 | 74.1% | 34.3% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 43.0 | 3.16e-01 | 77.8% | 51.7% |
| 3ga8A00 | 3.10.20.860 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.59 | 49.0 | 4.63e-01 | 100.0% | 77.6% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.59 | 42.0 | 3.86e-01 | 100.0% | 55.8% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.58 | 47.0 | 3.12e-01 | 92.6% | 92.2% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 41.0 | 3.44e-01 | 74.1% | 58.1% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.57 | 42.0 | 3.88e-01 | 79.6% | 88.7% |
| 3cjeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 48.0 | 3.56e-01 | 98.1% | 39.3% |
| 2pmbA01 | 3.30.1850.10 | Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like | 0.56 | 49.0 | 3.97e-01 | 100.0% | 95.3% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 46.0 | 3.05e-01 | 100.0% | 85.3% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 48.0 | 3.36e-01 | 100.0% | 37.2% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 44.0 | 2.95e-01 | 96.3% | 93.5% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 43.0 | 3.03e-01 | 83.3% | 46.6% |
| 6iccA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.55 | 35.0 | 3.04e-01 | 74.1% | 39.5% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 45.0 | 3.91e-01 | 100.0% | 62.8% |
| 1ktgA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 43.0 | 3.35e-01 | 92.6% | 76.6% |
| 3w3aG00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 44.0 | 3.12e-01 | 100.0% | 32.4% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 42.0 | 3.56e-01 | 90.7% | 82.7% |
| 2r31A01 | 3.30.2180.10 | Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like | 0.53 | 37.0 | 3.49e-01 | 74.1% | 75.8% |
| 4yg6B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 34.0 | 2.59e-01 | 100.0% | 22.1% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 2.83e-01 | 94.4% | 55.7% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 39.0 | 3.17e-01 | 94.4% | 41.5% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 34.0 | 2.99e-01 | 90.7% | 46.8% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.52 | 42.0 | 3.60e-01 | 100.0% | 54.4% |
| 3dmgA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 3.07e-01 | 100.0% | 36.6% |
| 5w0kA01 | 3.90.380.20 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II | 0.52 | 45.0 | 2.77e-01 | 98.1% | 42.2% |
| 3atsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 39.0 | 3.21e-01 | 98.1% | 42.2% |
| 4harA00 | 3.10.50.50 | Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein | 0.51 | 38.0 | 3.14e-01 | 81.5% | 54.1% |
| 2d8iA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 33.0 | 2.88e-01 | 85.2% | 42.0% |
| 2zpmA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 33.0 | 2.96e-01 | 72.2% | 43.0% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 45.0 | 3.08e-01 | 100.0% | 33.7% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3419351 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.72 | 48.0 | 4.59e-01 | 70.4% | 83.1% |
| 4541164 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.67 | 51.0 | 3.41e-01 | 83.3% | 60.9% |
| 3562501 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.66 | 50.0 | 4.48e-01 | 88.9% | 57.5% |
| 4975725 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.66 | 45.0 | 2.96e-01 | 72.2% | 84.0% |
| 4961983 | 3755.1.1.32 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › ATP-synt_D | 0.65 | 48.0 | 3.17e-01 | 79.6% | 60.0% |
| 3167354 | 284.1.3.1 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › SNF5 | 0.65 | 46.0 | 4.12e-01 | 77.8% | 54.8% |
| 3708645 | 230.4.1.0 ↗ | a+b two layers › T-fold › ApbE-like › ApbE-like | 0.64 | 50.0 | 4.16e-01 | 100.0% | 46.7% |
| 5056727 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.64 | 47.0 | 3.20e-01 | 79.6% | 67.3% |
| 3233222 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.64 | 55.0 | 3.36e-01 | 100.0% | 28.3% |
| 3228638 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.63 | 54.0 | 3.31e-01 | 100.0% | 29.2% |
| 4980573 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 52.0 | 3.67e-01 | 100.0% | 34.2% |
| 5010744 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 55.0 | 5.20e-01 | 100.0% | 84.6% |
| 3732600 | 3957.1.1.1 ↗ | a+b two layers › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › Gon7 | 0.62 | 50.0 | 4.33e-01 | 94.4% | 65.6% |
| 3791580 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.62 | 46.0 | 4.83e-01 | 94.4% | 95.8% |
| 4972532 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.61 | 52.0 | 4.46e-01 | 98.1% | 58.9% |
| 3275483 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 4.07e-01 | 94.4% | 60.0% |
| 3580898 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.60 | 42.0 | 3.00e-01 | 74.1% | 25.6% |
| 5055900 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.59 | 42.0 | 3.17e-01 | 90.7% | 28.6% |
| 4937624 | 3755.1.1.32 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › ATP-synt_D | 0.59 | 51.0 | 3.63e-01 | 100.0% | 40.6% |
| 5027304 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.59 | 51.0 | 3.62e-01 | 100.0% | 38.9% |
| 3386077 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.59 | 37.0 | 4.06e-01 | 87.0% | 77.8% |
| 3661948 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.59 | 43.0 | 3.95e-01 | 94.4% | 58.7% |
| 5078639 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.59 | 45.0 | 3.12e-01 | 83.3% | 54.7% |
| 3925865 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.59 | 42.0 | 3.33e-01 | 77.8% | 50.0% |
| 3321409 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 45.0 | 3.30e-01 | 96.3% | 27.2% |
| 3994619 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.59 | 52.0 | 3.11e-01 | 100.0% | 35.3% |
| 4798770 | 5097.1.1.3 ↗ | beta sandwiches › Middle beta-sandwich domain in anthrax protective antigen › Middle beta-sandwich domain in anthrax protective antigen › Middle beta-sandwich domain in anthrax protective antigen › Binary_toxB_2, Binary_toxB_3 | 0.59 | 39.0 | 2.75e-01 | 75.9% | 20.7% |
| 4000297 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.58 | 50.0 | 3.09e-01 | 98.1% | 25.0% |
| 5049910 | 2003.6.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like | 0.58 | 50.0 | 3.12e-01 | 100.0% | 43.0% |
| 3215682 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.58 | 40.0 | 3.03e-01 | 74.1% | 37.7% |
| 4493573 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.58 | 50.0 | 3.40e-01 | 98.1% | 39.0% |
| 3440530 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.57 | 43.0 | 4.28e-01 | 100.0% | 78.2% |
| 4959664 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.57 | 44.0 | 2.90e-01 | 83.3% | 24.1% |
| 4933528 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.57 | 49.0 | 3.36e-01 | 100.0% | 32.4% |
| 4002619 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.57 | 39.0 | 3.35e-01 | 96.3% | 45.9% |
| 3334359 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.57 | 45.0 | 3.10e-01 | 87.0% | 99.4% |
| 4373945 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.57 | 48.0 | 3.29e-01 | 100.0% | 31.4% |
| 3241070 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 50.0 | 3.21e-01 | 98.1% | 83.7% |
| 4947615 | 3604.1.1.0 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain | 0.56 | 42.0 | 3.99e-01 | 100.0% | 69.2% |
| 3735923 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.55 | 42.0 | 2.47e-01 | 90.7% | 13.7% |
| 5005640 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.55 | 39.0 | 3.76e-01 | 100.0% | 66.2% |
| 3301168 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.54 | 39.0 | 2.24e-01 | 100.0% | 7.6% |
| 3311784 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.54 | 45.0 | 3.44e-01 | 92.6% | 56.0% |
| 3597792 | 221.7.1.0 ↗ | a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 | 0.53 | 39.0 | 3.14e-01 | 85.2% | 39.1% |
| 4944756 | 3604.1.1.0 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain | 0.53 | 39.0 | 3.85e-01 | 100.0% | 75.0% |
| 5000672 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.51 | 42.0 | 3.74e-01 | 98.1% | 63.5% |
| 3964841 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.50 | 34.0 | 2.90e-01 | 74.1% | 39.0% |
| 3453496 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.50 | 37.0 | 2.17e-01 | 100.0% | 9.9% |