←Back to structures
ON968453.1__UXO93882.1__Pan2_63__00063
Bact-VirON968453.1__UXO93882.1__Pan2_63__00063
Identity
- Accession:
- ON968453 ↗
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-82
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 46.0 | 4.67e-01 | 100.0% | 88.1% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 44.0 | 3.30e-01 | 79.7% | 34.2% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 45.0 | 4.37e-01 | 100.0% | 76.8% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 46.0 | 4.48e-01 | 100.0% | 78.9% |
| 6f95A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 47.0 | 3.60e-01 | 94.9% | 85.1% |
| 4p4tA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 41.0 | 2.59e-01 | 79.7% | 13.7% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 43.0 | 4.20e-01 | 100.0% | 75.4% |
| 2l6oA01 | 2.40.10.320 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain | 0.56 | 37.0 | 3.55e-01 | 78.0% | 56.9% |
| 3htkC02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 42.0 | 4.36e-01 | 96.6% | 100.0% |
| 4wz2C00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 44.0 | 4.17e-01 | 100.0% | 75.7% |
| 5mnjH00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 44.0 | 4.31e-01 | 100.0% | 87.5% |
| 2onsA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 43.0 | 3.44e-01 | 96.6% | 85.3% |
| 5hkxA04 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 37.0 | 4.02e-01 | 83.1% | 100.0% |
| 1es7B00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.53 | 46.0 | 4.17e-01 | 100.0% | 80.7% |
| 1z5hA03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 33.0 | 3.13e-01 | 79.7% | 50.7% |
| 2hd0A02 | 2.30.30.710 | Mainly Beta › Roll › SH3 type barrels. › Hepatitis C virus non-structural protein NS2, C-terminal domain | 0.52 | 29.0 | 3.31e-01 | 98.3% | 90.9% |
| 2fsuA00 | 3.40.50.11310 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Bacterial phosphonate metabolism protein PhnH | 0.52 | 42.0 | 3.18e-01 | 98.3% | 90.0% |
| 4ntwB00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.51 | 33.0 | 3.31e-01 | 96.6% | 64.4% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.51 | 36.0 | 3.41e-01 | 79.7% | 94.9% |
| 5feyA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.50 | 39.0 | 3.69e-01 | 100.0% | 69.2% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3610401 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.66 | 48.0 | 4.84e-01 | 84.7% | 79.7% |
| 3269796 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 48.0 | 4.98e-01 | 98.3% | 96.4% |
| 3829429 | 192.8.1.132 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › zf-C3HC4_3 | 0.60 | 46.0 | 3.38e-01 | 100.0% | 29.2% |
| 4401347 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.59 | 42.0 | 4.37e-01 | 83.1% | 83.6% |
| 3464292 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.59 | 46.0 | 3.42e-01 | 100.0% | 31.4% |
| 4528585 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.59 | 45.0 | 3.11e-01 | 100.0% | 21.8% |
| 3988217 | 241.12.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like | 0.59 | 39.0 | 2.75e-01 | 79.7% | 20.0% |
| 4110773 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.59 | 45.0 | 2.67e-01 | 100.0% | 9.7% |
| 4148983 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.59 | 45.0 | 4.45e-01 | 100.0% | 81.5% |
| 3816489 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.59 | 49.0 | 4.69e-01 | 100.0% | 84.3% |
| 3348384 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 45.0 | 4.35e-01 | 100.0% | 74.3% |
| 4026888 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 45.0 | 2.85e-01 | 100.0% | 14.7% |
| 1554242 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.58 | 45.0 | 4.37e-01 | 100.0% | 76.8% |
| 3833867 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 47.0 | 4.20e-01 | 100.0% | 61.1% |
| 3812096 | 105.2.1.11 ↗ | alpha duplicates or obligate multimers › HLH-like › Dimerization domain in LRIM1/APL1C › Dimerization domain in LRIM1/APL1C › zf-C3HC4_3 | 0.58 | 44.0 | 2.99e-01 | 100.0% | 20.0% |
| 3377397 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.58 | 41.0 | 3.92e-01 | 93.2% | 64.3% |
| 3324882 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.58 | 46.0 | 4.23e-01 | 96.6% | 67.5% |
| 3632969 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.58 | 44.0 | 2.98e-01 | 100.0% | 19.6% |
| 3485528 | 5046.1.1.194 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › zf-C3HC4 | 0.58 | 44.0 | 3.01e-01 | 100.0% | 20.8% |
| 3541494 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.57 | 43.0 | 4.35e-01 | 100.0% | 86.4% |
| 3668905 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.57 | 43.0 | 3.72e-01 | 100.0% | 48.2% |
| 3414074 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.57 | 42.0 | 4.39e-01 | 100.0% | 98.0% |
| 3922370 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 3.36e-01 | 79.7% | 50.8% |
| 3188180 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.57 | 40.0 | 2.51e-01 | 78.0% | 14.6% |
| 3351227 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 41.0 | 2.60e-01 | 79.7% | 13.4% |
| 3479484 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.57 | 44.0 | 4.17e-01 | 100.0% | 72.0% |
| 3429887 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.56 | 44.0 | 4.56e-01 | 100.0% | 100.0% |
| 4585224 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.56 | 35.0 | 3.03e-01 | 79.7% | 35.7% |
| 4564843 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.56 | 43.0 | 3.59e-01 | 100.0% | 45.6% |
| 3377897 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 41.0 | 2.40e-01 | 79.7% | 8.5% |
| 3180912 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.56 | 42.0 | 3.17e-01 | 100.0% | 29.9% |
| 3532400 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.56 | 44.0 | 4.30e-01 | 100.0% | 83.1% |
| 3311630 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.56 | 44.0 | 3.94e-01 | 100.0% | 61.1% |
| 3690337 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.55 | 41.0 | 3.97e-01 | 100.0% | 69.3% |
| 2811279 | 376.1.1.15 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse | 0.55 | 43.0 | 3.98e-01 | 100.0% | 65.9% |
| 3203083 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 46.0 | 4.00e-01 | 100.0% | 73.0% |
| 3867225 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 40.0 | 3.79e-01 | 100.0% | 62.5% |
| 3874218 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.55 | 44.0 | 4.30e-01 | 100.0% | 82.9% |
| 5023508 | 275.1.1.5 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › Arc_PepC | 0.55 | 40.0 | 3.59e-01 | 81.4% | 55.3% |
| 3926328 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 42.0 | 3.72e-01 | 83.1% | 58.8% |
| 3511172 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 41.0 | 2.97e-01 | 100.0% | 25.4% |
| 3416902 | 192.8.1.119 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › zf-C3HC4 | 0.54 | 41.0 | 2.69e-01 | 100.0% | 16.6% |
| 3266881 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 43.0 | 4.00e-01 | 98.3% | 71.8% |
| 3612520 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.54 | 41.0 | 3.43e-01 | 100.0% | 43.2% |
| 3246456 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 44.0 | 4.30e-01 | 100.0% | 85.7% |
| 4943252 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.54 | 44.0 | 3.46e-01 | 100.0% | 51.0% |
| 3480518 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 43.0 | 4.21e-01 | 100.0% | 87.1% |
| 3941278 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 43.0 | 3.98e-01 | 100.0% | 84.7% |
| 3888998 | 109.4.1.872 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS1_INTS2-bd | 0.54 | 43.0 | 2.38e-01 | 98.3% | 10.3% |
| 3601028 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 43.0 | 4.31e-01 | 100.0% | 98.3% |
| 3236339 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 42.0 | 4.07e-01 | 100.0% | 86.5% |
| 3214278 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.52 | 43.0 | 3.38e-01 | 100.0% | 43.0% |
| 3215558 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.52 | 43.0 | 3.13e-01 | 100.0% | 34.7% |
| 3995189 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.50 | 38.0 | 3.82e-01 | 94.9% | 86.7% |