←Back to structures
ON968453.1__UXO93885.1__Pan2_66__00066
Bact-VirON968453.1__UXO93885.1__Pan2_66__00066
Identity
- Accession:
- ON968453 ↗
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-71
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k6qA02 | 3.30.160.620 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.76 | 56.0 | 4.99e-01 | 78.1% | 98.9% |
| 7bgsA01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.64 | 37.0 | 2.95e-01 | 100.0% | 31.1% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.61 | 43.0 | 4.31e-01 | 87.5% | 72.3% |
| 3js6A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 43.0 | 3.15e-01 | 79.7% | 57.9% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 46.0 | 4.08e-01 | 87.5% | 99.0% |
| 1dq3A02 | 3.30.160.90 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 41.0 | 3.97e-01 | 75.0% | 77.6% |
| 2hg7A00 | 3.30.56.60 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › XkdW-like | 0.58 | 32.0 | 3.32e-01 | 84.4% | 56.7% |
| 3zq4D03 | 3.10.20.580 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 44.0 | 3.96e-01 | 84.4% | 84.2% |
| 7d27A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.58 | 48.0 | 3.31e-01 | 100.0% | 26.1% |
| 2vifA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 46.0 | 3.88e-01 | 98.4% | 81.7% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.56 | 32.0 | 3.18e-01 | 100.0% | 52.9% |
| 3icjA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.55 | 38.0 | 3.66e-01 | 75.0% | 69.6% |
| 2p6rA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 3.40e-01 | 98.4% | 59.7% |
| 4bndA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 43.0 | 3.42e-01 | 93.8% | 62.2% |
| 2d5wA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.54 | 41.0 | 2.76e-01 | 100.0% | 21.0% |
| 3id6A01 | 3.30.420.220 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.54 | 38.0 | 3.30e-01 | 75.0% | 78.3% |
| 1vq8N00 | 3.30.420.100 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.54 | 44.0 | 3.37e-01 | 100.0% | 51.6% |
| 2lleA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 43.0 | 3.00e-01 | 92.2% | 61.1% |
| 2mcqA01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.53 | 39.0 | 3.82e-01 | 100.0% | 72.0% |
| 2iw5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 3.85e-01 | 100.0% | 77.1% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.53 | 42.0 | 3.61e-01 | 90.6% | 68.8% |
| 2yzsA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.52 | 33.0 | 3.15e-01 | 76.6% | 52.5% |
| 2jwkA00 | 3.30.420.270 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 39.0 | 3.77e-01 | 82.8% | 95.9% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 36.0 | 3.53e-01 | 100.0% | 67.6% |
| 4j9jA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 3.01e-01 | 96.9% | 62.6% |
| 3tdnA00 | 3.40.50.12600 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 3.51e-01 | 96.9% | 76.9% |
| 2g5fB00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.51 | 41.0 | 2.53e-01 | 92.2% | 80.9% |
| 1m56B02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 38.0 | 3.02e-01 | 85.9% | 52.3% |
| 2olnA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 3.04e-01 | 100.0% | 59.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3264176 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.70 | 53.0 | 4.23e-01 | 81.2% | 51.2% |
| 4568757 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.67 | 52.0 | 5.35e-01 | 82.8% | 98.3% |
| 3924728 | 386.1.1.251 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7381 | 0.67 | 48.0 | 4.57e-01 | 76.6% | 66.7% |
| 3938283 | 386.1.1.251 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7381 | 0.64 | 47.0 | 4.54e-01 | 79.7% | 69.3% |
| 4323662 | 4100.1.1.8 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF5395 | 0.63 | 45.0 | 4.25e-01 | 78.1% | 67.5% |
| 3988610 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.60 | 46.0 | 3.77e-01 | 85.9% | 43.8% |
| 4929825 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 45.0 | 3.81e-01 | 84.4% | 52.9% |
| 3365178 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 40.0 | 3.98e-01 | 73.4% | 67.7% |
| 4995140 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.59 | 41.0 | 3.23e-01 | 75.0% | 97.2% |
| 4972821 | 523.1.1.3 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › PF29994 | 0.58 | 42.0 | 3.49e-01 | 78.1% | 70.0% |
| 3386843 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.58 | 36.0 | 3.77e-01 | 76.6% | 68.3% |
| 3876524 | 386.1.1.303 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29350 | 0.58 | 40.0 | 4.29e-01 | 85.9% | 98.0% |
| 3540261 | 376.1.2.28 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-FCS | 0.55 | 43.0 | 4.55e-01 | 84.4% | 100.0% |
| 4380974 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.55 | 46.0 | 3.43e-01 | 92.2% | 73.8% |
| 4935256 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 47.0 | 3.17e-01 | 100.0% | 23.6% |
| 4392322 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.54 | 44.0 | 2.86e-01 | 90.6% | 77.0% |
| 4483471 | 2002.1.1.43 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › His_biosynth | 0.54 | 46.0 | 3.13e-01 | 100.0% | 57.7% |
| 3394477 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.54 | 40.0 | 4.13e-01 | 81.2% | 100.0% |
| 4928574 | 241.11.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like | 0.54 | 40.0 | 3.72e-01 | 84.4% | 67.0% |
| 4937431 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 34.0 | 2.56e-01 | 76.6% | 25.5% |
| 4569627 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.53 | 34.0 | 2.27e-01 | 76.6% | 14.1% |
| 3492882 | 2484.3.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N_2 | 0.53 | 44.0 | 3.47e-01 | 100.0% | 89.4% |
| 5028765 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.53 | 44.0 | 3.47e-01 | 95.3% | 62.7% |
| 3574033 | 284.2.1.1 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 | 0.53 | 43.0 | 2.86e-01 | 96.9% | 54.3% |
| 5008297 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 43.0 | 3.91e-01 | 95.3% | 66.7% |
| 3931934 | 330.9.1.0 ↗ | a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p | 0.53 | 37.0 | 3.68e-01 | 73.4% | 81.5% |
| 2050984 | 2007.1.14.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 | 0.53 | 42.0 | 3.39e-01 | 92.2% | 53.6% |
| 5004081 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.52 | 40.0 | 2.66e-01 | 90.6% | 82.5% |
| 4661121 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.51 | 40.0 | 2.69e-01 | 90.6% | 78.0% |
| 4938096 | 2003.1.2.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 | 0.51 | 44.0 | 3.22e-01 | 100.0% | 50.8% |
| 5062211 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.51 | 45.0 | 3.18e-01 | 100.0% | 54.5% |
| 3936608 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.56e-01 | 95.3% | 90.9% |
| 5048073 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.50 | 34.0 | 3.46e-01 | 75.0% | 70.8% |