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ON968456.1__UXO94048.1__Pan5_06__00007

Bact-Vir

ON968456.1__UXO94048.1__Pan5_06__00007

Identity

Accession:
ON968456 ↗
Kingdom:
phage

Quality

80.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudanabaena_phage_Pan5

TaxID: 2981588

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 94-347
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dktA02 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.71 28.0 4.69e-01 79.9% 100.0%
7mh2A01 3.30.2320.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain 0.69 27.0 4.54e-01 71.3% 100.0%
4efaE02 3.30.2320.30 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › ATP synthase, E subunit, C-terminal 0.64 26.0 3.60e-01 70.5% 73.6%
6wl5A01 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.63 19.0 2.54e-01 96.1% 45.6%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.63 20.0 3.29e-01 91.7% 75.6%
5uejA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 21.0 3.07e-01 97.2% 70.2%
5ykwA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 21.0 3.16e-01 85.4% 80.2%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 16.0 2.42e-01 96.9% 57.3%
7a6pB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 24.0 3.23e-01 91.3% 78.3%
3rtyB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 24.0 3.61e-01 90.6% 99.1%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.52 21.0 2.86e-01 90.9% 69.8%
5k8mA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 22.0 2.97e-01 95.3% 71.8%
1vrsD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 22.0 3.14e-01 84.6% 83.1%
1p97A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 23.0 3.36e-01 91.3% 93.0%
2kdkA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 23.0 3.39e-01 90.6% 96.3%
2kucA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 21.0 2.95e-01 84.6% 76.9%
4i5sA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 21.0 3.27e-01 90.6% 98.0%
2b02A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 22.0 3.38e-01 90.2% 100.0%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1935959 5090.1.1.1 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › Flavi_glycoprot 0.70 19.0 3.09e-01 91.7% 59.8%
5020745 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.63 23.0 4.03e-01 91.7% 94.7%
5083079 2485.3.1.3 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid 0.63 50.0 4.56e-01 99.2% 63.4%
5018724 872.3.1.0 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.62 24.0 4.07e-01 91.3% 97.9%
2443966 2485.3.1.1 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E 0.59 55.0 4.68e-01 100.0% 70.2%
3438829 3008.1.1.0 ↗ a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.56 23.0 3.44e-01 71.3% 85.5%
4974181 331.3.1.74 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF27226 0.55 19.0 3.18e-01 91.3% 82.8%
3961411 223.1.1.40 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › Rv3651-like_middle 0.54 25.0 3.60e-01 91.3% 90.4%
3627492 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 22.0 3.47e-01 91.3% 100.0%
4970968 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.53 21.0 3.01e-01 96.9% 77.0%
3695783 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.52 23.0 3.19e-01 90.2% 80.8%
4928030 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 19.0 2.73e-01 90.6% 68.3%
5049631 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 22.0 2.93e-01 91.3% 70.7%
3481772 331.9.1.4 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla 0.51 21.0 2.90e-01 90.9% 74.8%
3653398 331.9.1.10 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF28631 0.51 22.0 2.82e-01 92.1% 65.8%
3626286 223.1.1.29 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.51 24.0 3.21e-01 91.3% 81.4%
3415581 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 22.0 3.41e-01 90.2% 99.0%
3588721 223.1.1.2 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.50 21.0 3.16e-01 90.9% 87.0%
4989085 2485.1.1.37 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_2 0.50 20.0 2.87e-01 84.6% 76.5%