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ON968456.1__UXO94070.1__Pan5_28__00029

Bact-Vir

ON968456.1__UXO94070.1__Pan5_28__00029

Identity

Accession:
ON968456 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-68
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qfhA01 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.75 44.0 4.48e-01 100.0% 58.5%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.72 50.0 4.24e-01 100.0% 45.6%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.71 47.0 3.94e-01 100.0% 39.8%
2dt9A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 50.0 4.80e-01 100.0% 67.6%
1jqgA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.67 42.0 3.76e-01 100.0% 45.1%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.67 47.0 4.86e-01 74.2% 80.6%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.67 49.0 3.63e-01 100.0% 30.9%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.65 43.0 4.57e-01 93.9% 78.9%
1r6vA02 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.64 39.0 3.73e-01 100.0% 50.0%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 38.0 4.43e-01 97.0% 86.7%
1mk1A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.63 49.0 3.59e-01 84.8% 48.7%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.62 41.0 4.06e-01 98.5% 63.4%
1nijA02 3.30.1220.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Yjia; Chain: A;domain 2 › CobW-like, C-terminal domain 0.62 40.0 3.39e-01 93.9% 37.9%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 41.0 3.85e-01 100.0% 55.4%
6g1nD01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 54.0 5.06e-01 100.0% 100.0%
5bncA02 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.61 43.0 3.90e-01 75.8% 57.0%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 44.0 3.96e-01 100.0% 54.7%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.60 47.0 4.35e-01 100.0% 67.5%
1v43A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 37.0 3.81e-01 98.5% 65.6%
2a6mA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.58 45.0 3.58e-01 100.0% 42.3%
3s95A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 43.0 3.92e-01 100.0% 59.1%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 36.0 3.90e-01 95.5% 79.2%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 38.0 3.72e-01 100.0% 63.0%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 35.0 3.95e-01 93.9% 91.1%
2r7dA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 35.0 3.67e-01 98.5% 68.3%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 3.65e-01 98.5% 67.2%
4xmqA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 45.0 3.74e-01 93.9% 63.9%
7ovuA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 44.0 3.20e-01 86.4% 76.7%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 45.0 2.90e-01 89.4% 62.0%
1okjB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 46.0 3.85e-01 95.5% 67.7%
2pulB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 40.0 3.65e-01 100.0% 55.4%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 30.0 3.42e-01 77.3% 70.2%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.67e-01 90.9% 73.4%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.55 40.0 3.36e-01 77.3% 71.2%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 50.0 3.61e-01 100.0% 38.0%
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 46.0 3.78e-01 92.4% 74.6%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 33.0 3.16e-01 95.5% 49.4%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 4.06e-01 92.4% 69.9%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 37.0 3.84e-01 100.0% 77.0%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.55 40.0 3.22e-01 78.8% 87.6%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 4.15e-01 81.8% 93.8%
4nzrM03 3.30.110.180 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.54 47.0 3.84e-01 98.5% 77.2%
2r5vA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 45.0 3.57e-01 100.0% 83.3%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 32.0 3.36e-01 100.0% 67.2%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.53 44.0 4.35e-01 95.5% 97.3%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.52 39.0 3.36e-01 83.3% 74.4%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 33.0 3.25e-01 95.5% 56.0%
3jzyA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 44.0 3.70e-01 100.0% 94.4%
2ar5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 44.0 3.76e-01 100.0% 88.9%
4js8A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.67e-01 100.0% 62.9%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.52 42.0 3.11e-01 92.4% 45.6%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 42.0 3.72e-01 97.0% 90.6%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 44.0 3.00e-01 95.5% 40.4%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 32.0 3.35e-01 83.3% 66.1%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 44.0 3.57e-01 97.0% 55.0%
3c9aA03 2.20.20.160 Mainly Beta › Single Sheet › Anthopleurin-A › 0.51 39.0 3.87e-01 100.0% 78.9%
5x6vG00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 40.0 3.33e-01 90.9% 84.8%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.67e-01 100.0% 77.8%
2nn6I02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 38.0 3.24e-01 86.4% 79.1%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 44.0 2.97e-01 95.5% 39.2%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 39.0 3.09e-01 86.4% 54.6%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 40.0 2.75e-01 90.9% 42.4%
2eqsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 43.0 3.96e-01 98.5% 87.6%
5i4dA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 44.0 4.26e-01 100.0% 92.1%
2ja9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 37.0 3.53e-01 83.3% 97.6%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5013176 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.69 55.0 5.34e-01 89.4% 84.0%
3409245 223.2.1.36 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.67 47.0 4.13e-01 74.2% 49.0%
3598260 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.67 48.0 3.86e-01 100.0% 40.0%
3925738 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 46.0 3.89e-01 75.8% 50.0%
5079725 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 47.0 4.92e-01 100.0% 91.7%
3797523 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 46.0 3.71e-01 80.3% 50.0%
3284535 295.1.1.13 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3090 0.62 50.0 4.19e-01 92.4% 93.3%
4962459 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 45.0 4.18e-01 100.0% 59.1%
3948516 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.61 41.0 4.19e-01 97.0% 70.8%
3239304 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.60 49.0 3.49e-01 90.9% 50.2%
3271779 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 47.0 3.71e-01 98.5% 40.7%
4946166 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 39.0 4.11e-01 100.0% 78.3%
5044383 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.58 52.0 3.71e-01 98.5% 40.0%
5025080 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 35.0 3.88e-01 100.0% 82.0%
5053674 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.56 51.0 3.65e-01 100.0% 42.2%
5020098 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.56 38.0 3.83e-01 100.0% 68.6%
4987320 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 37.0 3.81e-01 100.0% 75.0%
4941490 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.56 42.0 3.33e-01 89.4% 40.0%
4947996 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 37.0 3.94e-01 100.0% 81.8%
3408369 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.55 43.0 4.17e-01 89.4% 82.7%
4066623 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.55 37.0 3.82e-01 93.9% 76.7%
3391867 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 46.0 3.78e-01 100.0% 48.9%
4119533 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.55 36.0 3.80e-01 93.9% 76.7%
3255146 300.1.1.2 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DNase_II 0.54 45.0 3.56e-01 97.0% 69.3%
4060909 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 37.0 3.02e-01 97.0% 34.8%
4031110 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 43.0 3.55e-01 89.4% 64.0%
4961746 304.8.1.122 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DmsR_N 0.54 49.0 4.02e-01 100.0% 77.4%
5035697 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 33.0 3.32e-01 98.5% 58.5%
3510204 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 47.0 2.91e-01 100.0% 37.7%
4043601 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.53 40.0 4.04e-01 81.8% 92.3%
4032291 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.53 42.0 4.24e-01 87.9% 98.5%
5017215 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 35.0 3.76e-01 100.0% 81.8%
5044748 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.76e-01 90.9% 70.5%
4252940 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.53 40.0 4.09e-01 86.4% 96.9%
5057503 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.52 37.0 3.84e-01 100.0% 83.3%
4997768 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 35.0 3.72e-01 100.0% 83.6%
4972486 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 35.0 3.77e-01 100.0% 85.5%
4975151 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 35.0 3.75e-01 100.0% 85.5%
3492938 300.1.1.2 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DNase_II 0.52 42.0 3.19e-01 97.0% 69.7%
4259370 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 33.0 3.49e-01 93.9% 78.2%
4433263 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.51 40.0 4.04e-01 86.4% 96.9%
3683031 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 41.0 4.01e-01 89.4% 84.0%
3222225 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 39.0 3.94e-01 83.3% 96.9%
4358761 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.51 38.0 3.87e-01 81.8% 92.3%
4434149 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.51 39.0 3.95e-01 86.4% 96.9%
4184764 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.51 39.0 4.01e-01 87.9% 98.5%
4425795 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.51 39.0 3.94e-01 86.4% 98.5%
3163896 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.51 40.0 2.85e-01 87.9% 69.0%
4861971 4099.1.1.3 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.51 35.0 3.85e-01 97.0% 100.0%
None 0.51 43.0 2.46e-01 98.5% 14.6%
4050524 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.51 39.0 3.92e-01 86.4% 96.9%
4100221 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.50 38.0 3.87e-01 84.8% 95.4%
3389706 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 36.0 3.37e-01 97.0% 60.0%
3838464 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.50 38.0 3.89e-01 86.4% 96.9%
5072502 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 38.0 4.00e-01 89.4% 98.3%