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ON968456.1__UXO94075.1__Pan5_33__00034

Bact-Vir

ON968456.1__UXO94075.1__Pan5_33__00034

Identity

Accession:
ON968456 ↗
Kingdom:
phage

Quality

75.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-84
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.95 67.0 7.42e-01 74.6% 89.6%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.93 76.0 7.44e-01 84.7% 87.1%
4fvmA06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.91 66.0 7.35e-01 76.3% 100.0%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.91 70.0 6.92e-01 98.3% 77.4%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 70.0 7.07e-01 81.4% 84.5%
3e0sA00 1.40.20.10 Mainly Alpha › Alpha solenoid › CHAD domain › CHAD domain 0.90 69.0 4.19e-01 79.7% 15.9%
4biuE01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.87 69.0 5.71e-01 100.0% 51.0%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 72.0 5.47e-01 89.8% 56.2%
2xzmO02 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.85 61.0 5.70e-01 74.6% 62.9%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 69.0 5.84e-01 89.8% 79.2%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.83 64.0 6.44e-01 98.3% 81.7%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.82 62.0 5.85e-01 86.4% 67.6%
3n2oA03 1.20.58.930 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 67.0 5.67e-01 89.8% 57.3%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.81 70.0 5.41e-01 94.9% 92.0%
1b04A03 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.80 59.0 5.82e-01 79.7% 74.2%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 66.0 4.58e-01 89.8% 29.0%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.80 66.0 4.64e-01 89.8% 34.7%
1xwjA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.79 63.0 4.81e-01 100.0% 39.2%
3gnlB02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.78 63.0 6.04e-01 86.4% 88.2%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.78 55.0 5.19e-01 100.0% 62.0%
2qr4A01 1.20.140.70 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain 0.78 63.0 4.63e-01 89.8% 47.4%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.78 71.0 5.32e-01 100.0% 73.3%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.78 58.0 5.19e-01 98.3% 56.5%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.77 65.0 5.96e-01 89.8% 74.3%
2ewfA02 1.20.1270.310 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.77 55.0 4.98e-01 81.4% 55.6%
4p9tA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.77 59.0 4.68e-01 98.3% 40.8%
2yfaB01 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.77 63.0 4.97e-01 89.8% 49.6%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.76 61.0 5.90e-01 100.0% 77.3%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.76 51.0 5.24e-01 71.2% 71.9%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.75 58.0 4.43e-01 100.0% 36.2%
4kw3A00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.75 62.0 3.95e-01 89.8% 58.6%
3ezuA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.74 61.0 4.21e-01 98.3% 28.6%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.73 56.0 5.40e-01 100.0% 74.6%
2p0vA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.72 59.0 3.50e-01 89.8% 22.4%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.72 59.0 4.18e-01 89.8% 34.4%
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.72 54.0 5.26e-01 86.4% 74.2%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 57.0 4.77e-01 89.8% 85.4%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.71 51.0 5.07e-01 100.0% 75.4%
3cpgA00 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.71 56.0 3.60e-01 84.7% 34.0%
1cpyA02 1.10.287.410 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 50.0 4.72e-01 78.0% 63.9%
3bh1A02 1.20.1570.10 Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like 0.69 55.0 4.67e-01 89.8% 87.1%
3t9oB00 1.20.120.30 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain 0.69 52.0 4.24e-01 100.0% 41.7%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.69 54.0 5.11e-01 89.8% 78.4%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.68 56.0 5.01e-01 93.2% 63.5%
4nphA02 1.20.1270.330 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.68 47.0 4.39e-01 72.9% 100.0%
1w9cA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.68 54.0 3.42e-01 96.6% 16.5%
2vxgA02 1.10.220.100 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 0.67 53.0 4.75e-01 89.8% 61.2%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.66 58.0 4.54e-01 100.0% 70.6%
7xcnM01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.65 52.0 4.81e-01 89.8% 73.1%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.65 52.0 4.27e-01 93.2% 92.5%
2au5A00 1.20.120.590 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › EF2947-like 0.65 48.0 3.81e-01 96.6% 37.2%
5lb3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 3.58e-01 100.0% 74.1%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.59 48.0 3.68e-01 96.6% 68.7%
2vebA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 44.0 3.17e-01 96.6% 31.6%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3330916 3846.1.1.0 alpha bundles › IcmR › IcmR › IcmR 0.96 70.0 7.30e-01 76.3% 81.8%
3401214 3755.3.1.345 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Hobbit 0.95 77.0 5.53e-01 100.0% 34.5%
4102845 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.94 72.0 5.48e-01 79.7% 39.2%
3466327 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.90 72.0 5.24e-01 100.0% 34.5%
4674 192.7.1.1 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB 0.90 71.0 6.85e-01 98.3% 75.4%
54358 4266.1.1.0 alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like 0.90 67.0 4.75e-01 78.0% 31.8%
5006188 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.89 69.0 6.92e-01 98.3% 80.0%
3718969 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.89 66.0 4.56e-01 100.0% 26.3%
3741700 109.40.1.2 alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C 0.89 70.0 5.45e-01 83.1% 42.6%
4497069 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.89 71.0 5.71e-01 100.0% 47.6%
4942654 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.88 70.0 4.99e-01 100.0% 31.2%
3595623 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.88 64.0 5.87e-01 76.3% 60.0%
3963155 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.87 72.0 6.54e-01 100.0% 68.0%
3607008 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.87 70.0 5.84e-01 100.0% 52.6%
5072337 5073.1.1.11 alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C 0.86 65.0 3.72e-01 78.0% 10.1%
3992672 109.4.1.911 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG6_C 0.85 72.0 4.09e-01 89.8% 11.2%
3781752 192.15.1.46 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Ribophorin_II_C 0.85 64.0 5.04e-01 79.7% 40.9%
5024001 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.84 70.0 5.81e-01 89.8% 62.0%
3975852 192.8.1.466 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Caudo_TAP 0.83 66.0 6.43e-01 100.0% 76.9%
4009505 7079.1.1.1 a+b complex topology › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Phage tail fiber assembly protein › Caudo_TAP 0.83 67.0 6.26e-01 100.0% 71.4%
4007897 3809.1.1.2 alpha bundles › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Caudo_TAP 0.83 67.0 6.26e-01 100.0% 71.4%
3979204 605.2.1.8 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Caudo_TAP 0.83 66.0 6.03e-01 100.0% 66.7%
2555592 5069.1.1.3 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_I 0.82 65.0 5.71e-01 100.0% 58.8%
3940901 109.4.1.911 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG6_C 0.82 68.0 3.90e-01 89.8% 11.7%
3188613 604.12.1.2 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 0.82 63.0 5.27e-01 89.8% 49.0%
3724570 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.81 63.0 5.99e-01 86.4% 71.4%
3783036 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.81 64.0 4.09e-01 100.0% 19.6%
3343524 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.80 67.0 5.07e-01 100.0% 40.8%
3625019 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 74.0 5.01e-01 100.0% 53.3%
4846660 192.18.1.1 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like › T3SS_needle_F 0.80 61.0 5.71e-01 100.0% 66.2%
3721864 616.1.1.0 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.79 56.0 5.44e-01 76.3% 67.7%
3973900 192.8.1.331 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF4824 0.79 60.0 5.36e-01 100.0% 57.6%
5078048 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.79 62.0 5.73e-01 100.0% 66.7%
4109644 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.79 67.0 5.02e-01 94.9% 79.3%
4290583 159.1.1.4 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › PRA-PH 0.79 69.0 5.46e-01 96.6% 57.4%
3730681 633.10.1.23 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › DUF4267 0.77 67.0 4.99e-01 98.3% 94.0%
3283574 150.8.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE 0.77 62.0 4.20e-01 88.1% 47.1%
3516366 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.77 60.0 3.86e-01 86.4% 20.0%
3287280 150.8.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE 0.77 63.0 4.36e-01 89.8% 92.6%
4095580 604.34.1.1 alpha bundles › Spectrin repeat-like › Helical bundle domain in arginine decarboxylase › Helical bundle domain in arginine decarboxylase › Arg_decarb_HB 0.77 61.0 5.17e-01 89.8% 53.7%
3954198 5043.1.1.0 extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.77 62.0 4.77e-01 88.1% 46.9%
3720488 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.77 71.0 5.30e-01 100.0% 44.6%
3725615 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.76 61.0 5.53e-01 88.1% 67.5%
3257366 133.1.1.1 alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.75 69.0 4.52e-01 100.0% 59.1%
3775580 601.1.1.1 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin 0.75 58.0 5.41e-01 100.0% 66.7%
3604704 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.75 65.0 4.94e-01 98.3% 86.4%
3692141 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.75 61.0 4.23e-01 89.8% 31.6%
3615716 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 66.0 5.20e-01 100.0% 67.5%
3985321 3579.1.1.29 extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › ThrE_2 0.72 64.0 4.79e-01 100.0% 63.4%
4976214 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.71 63.0 4.28e-01 96.6% 31.0%
4987684 3755.1.1.0 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.71 55.0 4.33e-01 100.0% 39.2%
3728304 604.12.1.24 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF6604 0.70 55.0 4.70e-01 89.8% 77.0%
3263072 109.4.1.427 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SDA1_HEAT 0.69 62.0 3.50e-01 100.0% 21.1%
3423908 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.69 54.0 4.71e-01 89.8% 76.8%
3368988 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 58.0 3.82e-01 96.6% 44.3%
3990688 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.66 52.0 4.39e-01 100.0% 51.6%
4939465 622.1.1.0 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain 0.61 49.0 4.02e-01 88.1% 61.7%