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ON970568.1__UVK59089.1__SEA_CEN1621_74__00074

Bact-Vir

ON970568.1__UVK59089.1__SEA_CEN1621_74__00074

Identity

Accession:
ON970568 ↗
Kingdom:
phage

Quality

58.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 64-117
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 60.0 5.64e-01 100.0% 71.2%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.46e-01 98.1% 80.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 5.44e-01 100.0% 78.8%
3d4rE01 2.40.128.400 Mainly Beta › Beta Barrel › Lipocalin › 0.67 39.0 3.38e-01 100.0% 35.7%
1pm3A00 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.67 57.0 5.31e-01 100.0% 76.8%
1m4zA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.63 51.0 3.65e-01 100.0% 49.5%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 50.0 4.04e-01 96.3% 46.1%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.62 54.0 4.37e-01 100.0% 50.5%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.58e-01 100.0% 68.8%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 5.17e-01 98.1% 100.0%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 51.0 4.62e-01 100.0% 70.0%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 5.02e-01 98.1% 87.1%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 5.01e-01 100.0% 83.1%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 48.0 3.89e-01 94.4% 66.9%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 4.82e-01 96.3% 100.0%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 47.0 3.67e-01 96.3% 68.8%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.61e-01 100.0% 87.5%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.37e-01 94.4% 79.7%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.76e-01 100.0% 87.9%
2cmgA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 43.0 4.38e-01 83.3% 96.1%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.58 44.0 2.98e-01 100.0% 20.1%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 44.0 4.46e-01 85.2% 96.2%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 43.0 4.19e-01 85.2% 79.7%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.57 47.0 4.54e-01 100.0% 83.3%
3htrA00 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.57 47.0 4.03e-01 98.1% 61.2%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.57 46.0 4.13e-01 94.4% 94.9%
1fouA02 2.40.500.10 Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) 0.57 47.0 3.68e-01 100.0% 53.0%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.56 48.0 4.12e-01 100.0% 61.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.51e-01 100.0% 85.5%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 46.0 4.48e-01 100.0% 91.9%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.55 41.0 4.19e-01 87.0% 98.0%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 47.0 3.20e-01 100.0% 26.0%
2v5yA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 3.28e-01 100.0% 43.2%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 47.0 3.51e-01 100.0% 37.8%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 47.0 3.30e-01 100.0% 73.9%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 45.0 3.60e-01 100.0% 44.4%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 44.0 3.81e-01 100.0% 62.8%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 45.0 3.10e-01 100.0% 26.6%
2w20A02 2.40.220.10 Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 0.53 41.0 3.76e-01 92.6% 90.0%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 36.0 2.62e-01 74.1% 50.0%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 44.0 3.56e-01 100.0% 47.4%
1cpyA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 37.0 2.34e-01 77.8% 17.8%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 42.0 3.83e-01 100.0% 65.8%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 40.0 2.97e-01 98.1% 52.7%
5xyib00 2.20.25.100 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 0.51 42.0 3.74e-01 98.1% 63.4%
5utkA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 35.0 3.16e-01 100.0% 50.6%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5015352 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 66.0 5.73e-01 100.0% 65.1%
3740784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 66.0 5.65e-01 100.0% 74.1%
4952973 4.15.1.0 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.73 66.0 5.51e-01 100.0% 73.3%
5037939 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.72 63.0 4.53e-01 100.0% 34.2%
3604145 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.70e-01 100.0% 83.3%
5053906 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.71 62.0 6.02e-01 100.0% 88.3%
5026284 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.70 61.0 5.12e-01 100.0% 66.3%
4945344 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 3.73e-01 100.0% 16.9%
3237640 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.69 60.0 4.78e-01 100.0% 51.8%
3602511 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.16e-01 98.1% 71.4%
5027293 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.68 56.0 4.99e-01 94.4% 63.7%
4342003 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.67 57.0 5.10e-01 100.0% 78.8%
3176265 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.67 58.0 4.24e-01 100.0% 41.3%
5056826 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.67 57.0 5.42e-01 100.0% 80.0%
3740221 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.67 58.0 4.21e-01 100.0% 39.4%
4146531 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.67 57.0 5.22e-01 100.0% 82.7%
3549321 4.11.1.5 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24, PF31032 0.67 57.0 4.17e-01 100.0% 39.4%
5032809 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.67 56.0 4.34e-01 100.0% 40.8%
2557227 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.67 57.0 5.14e-01 100.0% 68.8%
4995694 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.45e-01 100.0% 94.5%
3500542 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 55.0 4.69e-01 100.0% 56.7%
3774692 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.66 56.0 5.02e-01 100.0% 75.0%
5045214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.19e-01 100.0% 77.1%
5017073 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.65 56.0 4.10e-01 100.0% 35.3%
3318332 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.65 52.0 3.67e-01 88.9% 28.6%
4929262 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.64 54.0 4.00e-01 100.0% 38.7%
4929409 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 42.0 4.16e-01 100.0% 64.4%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.63 50.0 4.68e-01 100.0% 70.7%
3505839 375.4.1.0 few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like 0.62 44.0 4.88e-01 100.0% 100.0%
3568329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 5.08e-01 98.1% 88.3%
3758536 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.78e-01 98.1% 78.6%
3169767 1.1.7.49 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ski7_2nd 0.61 52.0 3.92e-01 100.0% 52.9%
3650143 2487.1.1.0 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" 0.59 50.0 3.79e-01 100.0% 97.2%
4072524 1.1.7.88 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.59 50.0 4.09e-01 100.0% 53.6%
3917372 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.59 47.0 4.30e-01 100.0% 66.7%
3235447 821.1.1.8 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › ANKLE2_3rd 0.59 42.0 3.58e-01 100.0% 45.6%
3180074 1.1.8.11 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.58 49.0 4.15e-01 98.1% 70.5%
3629536 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.05e-01 98.1% 54.7%
2971233 4056.1.1.2 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_connector 0.57 47.0 4.40e-01 100.0% 90.3%
3702154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 47.0 4.32e-01 100.0% 72.0%
3837954 1.1.7.87 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.57 47.0 4.05e-01 100.0% 61.1%
3501741 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.56 47.0 4.62e-01 98.1% 91.7%
4608778 1.1.7.107 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.56 47.0 3.74e-01 100.0% 47.5%
3997045 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.55 46.0 3.97e-01 100.0% 63.2%
3171334 1.1.7.102 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF28793 0.54 46.0 3.73e-01 100.0% 51.8%
3494162 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 46.0 3.68e-01 100.0% 48.7%
3489248 375.1.1.45 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mcm10 0.54 36.0 3.98e-01 98.1% 95.0%
3600162 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 47.0 4.12e-01 100.0% 66.3%
5039411 375.1.1.12 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e 0.53 45.0 4.33e-01 100.0% 82.8%
5044354 375.1.1.12 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e 0.53 45.0 4.06e-01 98.1% 69.3%
4147685 1.1.5.26 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN 0.53 45.0 3.64e-01 100.0% 49.1%
5030111 375.1.1.12 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e 0.53 44.0 4.25e-01 100.0% 81.2%
5019693 375.1.1.58 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB 0.52 42.0 4.35e-01 100.0% 100.0%
4934222 375.1.1.12 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e 0.52 44.0 4.12e-01 100.0% 76.5%
5013673 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 41.0 3.07e-01 100.0% 38.3%
5033277 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.52 40.0 3.92e-01 94.4% 100.0%
3170371 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.52 43.0 3.46e-01 100.0% 61.7%
5080411 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 39.0 3.83e-01 94.4% 100.0%
3397132 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 42.0 4.19e-01 100.0% 98.2%
3702172 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.50 42.0 4.03e-01 100.0% 92.3%
D2 medium residues 128-250
PDB