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ON970616.1__UVK63572.1__SEA_JANEEMI_52__00052

Bact-Vir

ON970616.1__UVK63572.1__SEA_JANEEMI_52__00052

Identity

Accession:
ON970616 ↗
Kingdom:
phage

Quality

82.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casidaviridae› Yangvirus› Arthrobacter_phage_Janeemi

TaxID: 2927240

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-130
PDB
Domain cluster: rep: MT374856.1__QKE55525.1__vBYpM23_00001__00001__D2-97
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00239.27 best Resolvase 87.1 1.70e-24 99.2% 84.9%
D2 medium residues 161-271
PDB
Domain cluster: rep: OR521081.1__WNO27914.1__SEA_HALO3_46__00046__D16-107
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07508.20 best Recombinase 49.1 8.40e-13 84.7% 95.1%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bqqB02 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.85 81.0 6.58e-01 100.0% 77.9%
6dnwA01 3.90.1750.20 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 0.83 68.0 6.59e-01 100.0% 77.2%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 34.0 4.44e-01 73.9% 72.7%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 33.0 4.74e-01 78.4% 94.0%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 35.0 4.94e-01 91.9% 94.5%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 32.0 4.58e-01 82.0% 100.0%
1w36C06 1.10.10.990 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 38.0 4.52e-01 83.8% 83.3%
3rmqA02 6.10.140.1650 Special › Helix non-globular › Helix Hairpins › 0.63 27.0 3.64e-01 81.1% 76.8%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 38.0 4.26e-01 88.3% 80.5%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 37.0 4.27e-01 99.1% 88.0%
4ragA02 1.10.10.430 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphatase 2C, C-terminal domain suprefamily 0.58 35.0 4.23e-01 97.3% 97.1%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 34.0 3.88e-01 84.7% 80.7%
1nd7A01 3.90.1750.10 Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains 0.55 43.0 3.70e-01 84.7% 54.1%
1o82A00 1.20.225.10 Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 0.55 33.0 3.89e-01 75.7% 92.9%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.77e-01 88.3% 73.8%
2ns0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 33.0 3.69e-01 86.5% 82.1%
3k6jA02 1.10.1040.50 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › 0.52 45.0 3.63e-01 100.0% 50.7%
1uujA00 1.20.960.30 Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › 0.51 27.0 3.07e-01 77.5% 67.1%
2q0iA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 40.0 2.89e-01 91.9% 31.3%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4939690 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.90 69.0 7.28e-01 100.0% 88.0%
4969809 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.90 76.0 7.69e-01 100.0% 89.1%
5032641 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.89 78.0 7.84e-01 100.0% 90.9%
4932316 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.88 68.0 7.21e-01 100.0% 89.0%
5030856 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.87 76.0 7.29e-01 99.1% 81.6%
5038787 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.87 72.0 7.25e-01 100.0% 87.3%
1062575 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.85 81.0 6.57e-01 100.0% 77.5%
3282557 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.85 81.0 6.64e-01 100.0% 83.8%
4014657 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 40.0 5.77e-01 92.8% 96.4%
3590291 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.84 80.0 7.09e-01 100.0% 80.7%
4946654 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 39.0 5.26e-01 83.8% 85.0%
4944585 101.1.2.872 ↗ alpha arrays › HTH › HTH › winged helix domain › rve 0.82 40.0 5.43e-01 86.5% 88.3%
3956288 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.81 75.0 6.97e-01 100.0% 80.0%
3962001 101.1.1.40 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Recombinase 0.81 76.0 6.97e-01 100.0% 81.4%
4392311 101.35.1.1 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH2 0.75 32.0 4.87e-01 80.2% 100.0%
3380070 101.43.1.3 ↗ alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain › PF26175 0.73 35.0 4.65e-01 76.6% 85.0%
4926838 101.43.1.0 ↗ alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.72 41.0 5.23e-01 89.2% 95.4%
3590551 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.72 34.0 4.84e-01 94.6% 100.0%
3812799 101.1.1.291 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF26175 0.71 37.0 4.68e-01 76.6% 86.2%
3983493 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.70 33.0 4.73e-01 94.6% 100.0%
3580194 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 37.0 4.28e-01 85.6% 71.2%
3196401 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 34.0 4.61e-01 92.8% 94.5%
5062870 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 40.0 4.46e-01 84.7% 72.2%
3981939 101.1.1.202 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 0.68 35.0 4.71e-01 97.3% 98.2%
3707222 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 33.0 4.33e-01 81.1% 90.9%
3504540 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.66 33.0 4.50e-01 98.2% 96.4%
3933890 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.65 34.0 3.59e-01 86.5% 54.0%
3393016 101.1.2.526 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27602 0.65 39.0 4.59e-01 88.3% 89.3%
3234027 101.1.1.75 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.64 33.0 4.17e-01 78.4% 88.3%
3429589 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.62 38.0 3.53e-01 89.2% 47.6%
3451047 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.61 38.0 3.76e-01 89.2% 57.5%
3584520 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 40.0 4.03e-01 81.1% 66.4%
4940719 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 38.0 3.42e-01 88.3% 45.8%
3489868 101.1.1.4 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PAX 0.60 38.0 4.19e-01 83.8% 77.8%
3441899 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.59 36.0 4.14e-01 87.4% 83.7%
3645601 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.59 37.0 3.58e-01 87.4% 54.4%
3956565 101.1.2.244 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.59 37.0 4.09e-01 96.4% 81.2%
3525815 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.59 35.0 3.76e-01 84.7% 68.4%
3868811 101.1.2.67 ↗ alpha arrays › HTH › HTH › winged helix domain › HARE-HTH 0.58 37.0 4.05e-01 83.8% 77.8%
3592236 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.57 37.0 4.09e-01 84.7% 84.7%
3277954 2008.1.1.67 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecC_C 0.55 41.0 2.89e-01 77.5% 43.7%
4979847 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 39.0 3.30e-01 93.7% 43.1%
4996226 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.54 37.0 3.95e-01 99.1% 80.0%
3958076 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 40.0 2.89e-01 77.5% 46.7%
4167796 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.51 36.0 2.99e-01 100.0% 38.1%
5050809 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 41.0 2.86e-01 86.5% 29.3%
5077356 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 38.0 3.68e-01 87.4% 71.2%