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ON970620.1__UVK63841.1__SEA_LILYPAD_37__00037
Bact-VirON970620.1__UVK63841.1__SEA_LILYPAD_37__00037
Identity
- Accession:
- ON970620 ↗
- Kingdom:
- phage
Quality
93.2
mean pLDDT
Taxonomy
TaxID: 2927247
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-114
Domain cluster:
rep: MK977700.1__QDF19273.1__SEA_STICKYNOTE_80__00076__D21-114
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v0bA00 | 3.30.720.210 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.66 | 42.0 | 5.02e-01 | 88.5% | 100.0% |
| 4m8aA00 | 3.30.720.210 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.63 | 43.0 | 4.96e-01 | 87.5% | 100.0% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 31.0 | 3.38e-01 | 82.3% | 57.7% |
| 2a8pA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.61 | 41.0 | 3.35e-01 | 70.8% | 46.4% |
| 5nckA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 39.0 | 3.85e-01 | 79.2% | 62.9% |
| 3rc2A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 48.0 | 3.87e-01 | 90.6% | 88.4% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 37.0 | 4.29e-01 | 87.5% | 97.0% |
| 2q2rA02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.56 | 42.0 | 3.31e-01 | 79.2% | 64.0% |
| 1zxtA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 35.0 | 4.20e-01 | 93.8% | 100.0% |
| 5gvyA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.56 | 40.0 | 3.51e-01 | 75.0% | 89.0% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 37.0 | 4.16e-01 | 91.7% | 97.0% |
| 4ew6A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 46.0 | 3.68e-01 | 90.6% | 85.7% |
| 1wfmA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 40.0 | 3.61e-01 | 78.1% | 81.2% |
| 3wmyA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 43.0 | 2.99e-01 | 84.4% | 79.5% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 36.0 | 4.10e-01 | 88.5% | 98.5% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 35.0 | 4.10e-01 | 86.5% | 97.0% |
| 1u04A04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 41.0 | 3.14e-01 | 81.2% | 90.2% |
| 4d8mA03 | 2.100.10.40 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › | 0.54 | 39.0 | 3.11e-01 | 76.0% | 82.4% |
| 2e6mA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 46.0 | 3.80e-01 | 99.0% | 81.2% |
| 5v6fA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.52 | 36.0 | 3.24e-01 | 71.9% | 59.9% |
| 1ju2A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 43.0 | 2.97e-01 | 89.6% | 66.3% |
| 4iq0C02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 43.0 | 3.54e-01 | 90.6% | 92.3% |
| 1vmoA00 | 2.100.10.20 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Vitelline membrane outer layer protein I (VOMI) | 0.52 | 38.0 | 3.18e-01 | 76.0% | 79.8% |
| 2jz4A01 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.52 | 38.0 | 3.29e-01 | 77.1% | 55.4% |
| 4z24A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 2.79e-01 | 87.5% | 69.6% |
| 2ra9A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.51 | 34.0 | 3.73e-01 | 82.3% | 89.0% |
| 3q9tA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 42.0 | 3.08e-01 | 89.6% | 70.6% |
| 1xezA04 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.51 | 36.0 | 3.18e-01 | 72.9% | 60.7% |
| 3cymA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.50e-01 | 99.0% | 70.0% |
| 7r8iA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 41.0 | 3.18e-01 | 88.5% | 98.2% |
| 2oap101 | 3.30.450.380 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 42.0 | 3.28e-01 | 92.7% | 74.7% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4073869 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.67 | 46.0 | 5.24e-01 | 91.7% | 98.6% |
| 3923261 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.67 | 53.0 | 4.96e-01 | 86.5% | 70.8% |
| 3505861 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.66 | 53.0 | 3.82e-01 | 86.5% | 43.6% |
| 3516180 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.65 | 52.0 | 5.06e-01 | 86.5% | 78.8% |
| 5004322 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 49.0 | 5.11e-01 | 80.2% | 100.0% |
| None | — | 0.64 | 51.0 | 3.38e-01 | 86.5% | 44.0% | |
| 3930501 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.61 | 47.0 | 4.33e-01 | 83.3% | 97.6% |
| 3279082 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.59 | 35.0 | 3.86e-01 | 74.0% | 74.7% |
| 3837126 | 76.1.1.2 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin | 0.58 | 41.0 | 3.48e-01 | 72.9% | 84.5% |
| 3988855 | 3414.1.1.5 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › Big_4 | 0.58 | 40.0 | 4.39e-01 | 81.2% | 92.0% |
| 3955873 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.57 | 34.0 | 3.83e-01 | 72.9% | 80.0% |
| 3940715 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.57 | 44.0 | 4.05e-01 | 86.5% | 91.9% |
| 1684039 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.56 | 39.0 | 3.31e-01 | 71.9% | 69.3% |
| 4029664 | 108.1.1.12 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › p25-alpha | 0.56 | 38.0 | 3.88e-01 | 70.8% | 87.4% |
| 4193392 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.56 | 46.0 | 3.85e-01 | 89.6% | 86.1% |
| 3641066 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.56 | 45.0 | 2.85e-01 | 90.6% | 51.9% |
| 3523526 | 220.1.1.174 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros | 0.56 | 37.0 | 3.57e-01 | 77.1% | 59.1% |
| 2879361 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.55 | 40.0 | 3.38e-01 | 75.0% | 86.0% |
| None | — | 0.54 | 44.0 | 3.04e-01 | 89.6% | 77.1% | |
| 3980438 | 4166.1.1.1 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › T6SS_VasE | 0.54 | 39.0 | 3.24e-01 | 78.1% | 84.7% |
| 4021541 | 2003.1.2.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N | 0.54 | 43.0 | 3.02e-01 | 87.5% | 94.5% |
| 3338309 | 2003.1.2.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N | 0.54 | 44.0 | 3.06e-01 | 89.6% | 75.5% |
| 3262497 | 11.1.1.801 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 | 0.54 | 41.0 | 3.67e-01 | 79.2% | 94.8% |
| 3918889 | 2.1.1.257 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30832 | 0.54 | 39.0 | 3.61e-01 | 78.1% | 88.5% |
| 3438573 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 43.0 | 2.71e-01 | 89.6% | 48.5% |
| 3649710 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 43.0 | 2.68e-01 | 89.6% | 49.0% |
| 4828612 | 2.1.1.29 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep-A_N | 0.53 | 40.0 | 3.62e-01 | 79.2% | 75.4% |
| 3971679 | 4166.1.1.0 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like | 0.53 | 39.0 | 3.34e-01 | 79.2% | 86.1% |
| 3096910 | 2003.1.2.63 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N, GMC_oxred_C, NAD_binding_8 | 0.53 | 43.0 | 2.71e-01 | 89.6% | 56.1% |
| 4484723 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.53 | 41.0 | 4.00e-01 | 83.3% | 86.5% |
| 3970216 | 4166.1.1.0 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like | 0.53 | 39.0 | 3.20e-01 | 79.2% | 85.3% |
| 2390431 | 4166.1.1.1 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › T6SS_VasE | 0.53 | 39.0 | 3.18e-01 | 78.1% | 86.6% |
| 3184736 | 76.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I | 0.52 | 37.0 | 3.49e-01 | 72.9% | 80.0% |
| 4380348 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 42.0 | 2.66e-01 | 88.5% | 50.4% |
| 3259968 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.52 | 42.0 | 4.45e-01 | 88.5% | 100.0% |
| 4186816 | 2003.1.2.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N | 0.52 | 41.0 | 2.82e-01 | 88.5% | 66.9% |
| 4051690 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.51 | 39.0 | 3.83e-01 | 82.3% | 86.7% |
| 3697980 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 42.0 | 2.60e-01 | 89.6% | 92.7% |
| 4373795 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.51 | 38.0 | 3.65e-01 | 82.3% | 83.1% |
| 3258564 | 11.1.1.801 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 | 0.51 | 38.0 | 3.37e-01 | 80.2% | 91.7% |
| 3953673 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.50 | 41.0 | 2.67e-01 | 89.6% | 62.4% |
| 4257154 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.50 | 39.0 | 3.79e-01 | 84.4% | 82.4% |
| 4033192 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 38.0 | 3.49e-01 | 85.4% | 60.0% |