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ON970620.1__UVK63842.1__SEA_LILYPAD_38__00038
Bact-VirON970620.1__UVK63842.1__SEA_LILYPAD_38__00038
Identity
- Accession:
- ON970620 ↗
- Kingdom:
- phage
Quality
84.9
mean pLDDT
Taxonomy
TaxID: 2927247
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-61
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4k91A02 | 2.60.410.10 | Mainly Beta › Sandwich › Peptidoglycan synthesis regulatory factor (PBP3), Domain 2 › D-Ala-D-Ala carboxypeptidase, C-terminal domain | 0.70 | 48.0 | 4.05e-01 | 84.5% | 45.1% |
| 3a3jA02 | 2.60.410.10 | Mainly Beta › Sandwich › Peptidoglycan synthesis regulatory factor (PBP3), Domain 2 › D-Ala-D-Ala carboxypeptidase, C-terminal domain | 0.68 | 49.0 | 4.09e-01 | 86.2% | 46.7% |
| 2cocA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 48.0 | 4.11e-01 | 100.0% | 44.0% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.68 | 42.0 | 3.06e-01 | 84.5% | 24.0% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.64 | 44.0 | 4.49e-01 | 75.9% | 76.4% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 41.0 | 3.22e-01 | 82.8% | 32.5% |
| 2h3gX01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 48.0 | 4.12e-01 | 100.0% | 53.4% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.62 | 41.0 | 3.37e-01 | 100.0% | 35.1% |
| 3mfdA02 | 2.30.140.30 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › | 0.61 | 44.0 | 3.84e-01 | 84.5% | 51.7% |
| 2cx7A00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.60 | 42.0 | 3.24e-01 | 96.6% | 33.3% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.60 | 37.0 | 4.01e-01 | 87.9% | 73.9% |
| 3k0zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 41.0 | 2.96e-01 | 81.0% | 27.5% |
| 1btkA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 49.0 | 3.69e-01 | 100.0% | 36.3% |
| 6dxwA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.59 | 44.0 | 2.95e-01 | 100.0% | 20.5% |
| 3qfmA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.57 | 44.0 | 2.89e-01 | 84.5% | 85.3% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.57 | 47.0 | 3.58e-01 | 100.0% | 36.6% |
| 8ainB01 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.57 | 45.0 | 3.77e-01 | 87.9% | 48.6% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 50.0 | 3.74e-01 | 96.6% | 61.3% |
| 2bngC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.00e-01 | 82.8% | 30.0% |
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 41.0 | 3.12e-01 | 82.8% | 33.3% |
| 2zdjA00 | 3.10.450.450 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 47.0 | 4.50e-01 | 93.1% | 79.4% |
| 5j7dC00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 49.0 | 4.07e-01 | 100.0% | 82.1% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.05e-01 | 82.8% | 32.8% |
| 5z1aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.45e-01 | 84.5% | 61.9% |
| 2nrhB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 51.0 | 3.75e-01 | 100.0% | 53.5% |
| 6g62A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 49.0 | 3.97e-01 | 100.0% | 75.7% |
| 4ywrA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 47.0 | 3.09e-01 | 100.0% | 23.7% |
| 2k5tA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 50.0 | 3.82e-01 | 98.3% | 66.4% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.31e-01 | 100.0% | 40.2% |
| 1s3zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 50.0 | 3.63e-01 | 98.3% | 88.4% |
| 2l6mA00 | 3.30.160.400 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 47.0 | 3.91e-01 | 100.0% | 54.5% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 41.0 | 3.34e-01 | 100.0% | 40.3% |
| 2a4vA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 45.0 | 3.50e-01 | 100.0% | 76.4% |
| 3ehcB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 41.0 | 3.23e-01 | 82.8% | 40.6% |
| 2oodA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.54 | 44.0 | 3.39e-01 | 100.0% | 38.6% |
| 2diyA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 47.0 | 3.84e-01 | 100.0% | 71.2% |
| 5eoxB03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 48.0 | 3.73e-01 | 100.0% | 67.2% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 40.0 | 3.21e-01 | 96.6% | 38.8% |
| 1kzfA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 46.0 | 3.27e-01 | 100.0% | 97.5% |
| 3eo5A01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.54 | 41.0 | 3.60e-01 | 82.8% | 70.5% |
| 2g7zA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.54 | 45.0 | 3.62e-01 | 100.0% | 46.7% |
| 3dmlA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 48.0 | 4.06e-01 | 100.0% | 90.5% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 4.12e-01 | 86.2% | 98.4% |
| 1lshA03 | 2.20.50.20 | Mainly Beta › Single Sheet › Outer Surface Protein A; domain 2 › Lipovitellin. Chain A, domain 3 | 0.53 | 38.0 | 3.25e-01 | 84.5% | 45.9% |
| 3gm8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.72e-01 | 82.8% | 65.4% |
| 6a5gA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.07e-01 | 82.8% | 37.5% |
| 1sjwA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.03e-01 | 82.8% | 35.9% |
| 1oxxK03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 38.0 | 4.17e-01 | 86.2% | 100.0% |
| 3f7xA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 3.02e-01 | 82.8% | 39.1% |
| 4pcqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.52 | 35.0 | 3.24e-01 | 74.1% | 82.1% |
| 7febA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.52 | 46.0 | 3.53e-01 | 100.0% | 92.3% |
| 3bexA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 45.0 | 3.64e-01 | 100.0% | 71.4% |
| 2dbbA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.51 | 36.0 | 3.19e-01 | 77.6% | 75.3% |
| 7t8tA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.32e-01 | 100.0% | 46.6% |
| 1h8mA00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.50 | 41.0 | 3.28e-01 | 100.0% | 95.0% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4043193 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.84 | 56.0 | 4.43e-01 | 100.0% | 36.4% |
| 4229347 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.81 | 53.0 | 4.20e-01 | 100.0% | 35.5% |
| 4650232 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.81 | 54.0 | 4.31e-01 | 100.0% | 36.4% |
| 4976249 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 54.0 | 4.22e-01 | 100.0% | 35.7% |
| 4674401 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.78 | 52.0 | 4.28e-01 | 100.0% | 39.0% |
| 4988335 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 50.0 | 3.85e-01 | 100.0% | 32.0% |
| 4623449 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.72 | 50.0 | 4.03e-01 | 100.0% | 38.2% |
| 4944011 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.72 | 54.0 | 4.65e-01 | 100.0% | 52.2% |
| 4341865 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.71 | 51.0 | 5.28e-01 | 100.0% | 80.0% |
| 3671443 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 48.0 | 4.65e-01 | 100.0% | 63.1% |
| 5066484 | 2484.1.1.333 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1464 | 0.69 | 52.0 | 3.53e-01 | 100.0% | 23.5% |
| 3266526 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.68 | 48.0 | 3.59e-01 | 100.0% | 30.9% |
| 5052906 | 304.103.1.5 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › TM1586_NiRdase | 0.66 | 51.0 | 3.67e-01 | 86.2% | 57.1% |
| 6742 | 244.4.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases, PF27537 | 0.65 | 39.0 | 4.52e-01 | 81.0% | 91.9% |
| 3591979 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.65 | 42.0 | 3.08e-01 | 94.8% | 24.5% |
| 4986005 | 2484.1.1.333 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1464 | 0.63 | 45.0 | 3.30e-01 | 100.0% | 27.5% |
| 4942435 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 54.0 | 4.12e-01 | 100.0% | 83.4% |
| 3515688 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 53.0 | 4.30e-01 | 100.0% | 55.8% |
| 3825862 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.62 | 51.0 | 4.27e-01 | 100.0% | 52.4% |
| 4889631 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.61 | 40.0 | 3.30e-01 | 84.5% | 37.1% |
| 5023513 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.61 | 47.0 | 3.05e-01 | 82.8% | 99.2% |
| 3816107 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.59 | 45.0 | 4.64e-01 | 89.7% | 92.7% |
| 3785535 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 52.0 | 4.00e-01 | 100.0% | 87.7% |
| 4175410 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.58 | 41.0 | 4.21e-01 | 100.0% | 78.2% |
| 5042072 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 52.0 | 3.98e-01 | 100.0% | 79.2% |
| 4979039 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.58 | 52.0 | 3.50e-01 | 100.0% | 39.7% |
| 4134161 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.58 | 50.0 | 3.85e-01 | 100.0% | 43.0% |
| 4961801 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.57 | 51.0 | 3.46e-01 | 100.0% | 41.0% |
| 4009403 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.57 | 48.0 | 3.81e-01 | 96.6% | 82.4% |
| 4293728 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.57 | 49.0 | 3.76e-01 | 100.0% | 43.2% |
| 3813907 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.57 | 41.0 | 4.17e-01 | 96.6% | 85.5% |
| 3905168 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 41.0 | 3.33e-01 | 100.0% | 36.9% |
| 4932449 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 50.0 | 4.00e-01 | 100.0% | 83.5% |
| 4960066 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.56 | 43.0 | 2.82e-01 | 82.8% | 89.6% |
| 4026783 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.56 | 47.0 | 3.71e-01 | 100.0% | 76.3% |
| 3837884 | 376.1.1.63 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › C1_2 | 0.56 | 42.0 | 3.42e-01 | 98.3% | 39.2% |
| 4028871 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.55 | 43.0 | 4.04e-01 | 86.2% | 90.4% |
| None | — | 0.55 | 46.0 | 3.89e-01 | 100.0% | 81.1% | |
| 5011867 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.55 | 47.0 | 3.43e-01 | 100.0% | 41.1% |
| 3436712 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.54 | 42.0 | 4.16e-01 | 96.6% | 81.5% |
| 1029 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.54 | 44.0 | 4.20e-01 | 100.0% | 77.1% |
| 3707657 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 42.0 | 3.25e-01 | 84.5% | 39.2% |
| 4098699 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.54 | 46.0 | 3.70e-01 | 98.3% | 88.3% |
| 3930408 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.54 | 46.0 | 4.19e-01 | 98.3% | 72.5% |
| 3182794 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 41.0 | 3.20e-01 | 100.0% | 35.7% |
| 4018760 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 40.0 | 3.78e-01 | 100.0% | 68.0% |
| 4651811 | 11.1.1.204 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4982 | 0.53 | 42.0 | 3.74e-01 | 84.5% | 68.8% |
| 4388249 | 11.1.1.204 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4982 | 0.53 | 41.0 | 3.38e-01 | 82.8% | 55.0% |
| 3666890 | 223.1.1.28 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › bHLH-MYC_N | 0.53 | 44.0 | 3.13e-01 | 100.0% | 28.1% |
| 4946414 | 301.13.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain | 0.53 | 45.0 | 3.60e-01 | 100.0% | 49.6% |
| 4022521 | 5.1.4.289 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, eIF2A, ANAPC4_WD40 | 0.52 | 45.0 | 2.83e-01 | 98.3% | 20.0% |
| 1680474 | 60.1.1.3 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Sld7_N | 0.52 | 41.0 | 3.33e-01 | 93.1% | 58.5% |
| 3428450 | 2485.1.1.21 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TXD17-like_Trx | 0.52 | 44.0 | 3.45e-01 | 100.0% | 77.0% |
| 3885625 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.52 | 43.0 | 3.30e-01 | 100.0% | 39.4% |
| 4575595 | 378.1.1.11 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclea_NS_2 | 0.52 | 41.0 | 3.30e-01 | 91.4% | 86.0% |
| 5034493 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.51 | 35.0 | 3.55e-01 | 72.4% | 91.7% |
| 3816040 | 223.1.1.28 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › bHLH-MYC_N | 0.51 | 42.0 | 3.12e-01 | 100.0% | 33.0% |
| 3248470 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.51 | 41.0 | 3.41e-01 | 98.3% | 68.3% |
D2
high
residues 66-133
Domain cluster:
rep: KU935715.1__AND75446.1__ME3_285__00285__D2-62
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.61 | 32.0 | 4.00e-01 | 95.6% | 91.7% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.58 | 41.0 | 3.32e-01 | 75.0% | 47.8% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 33.0 | 3.66e-01 | 86.8% | 82.0% |
| 4c1sA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.54 | 41.0 | 2.66e-01 | 85.3% | 85.3% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 41.0 | 2.81e-01 | 83.8% | 45.1% |
| 3i3lA02 | 3.30.390.160 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.54 | 47.0 | 3.93e-01 | 100.0% | 60.0% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 33.0 | 3.52e-01 | 83.8% | 72.7% |
| 4ig1A00 | 3.10.520.10 | Alpha Beta › Roll › T-fold › ApbE-like domains | 0.54 | 48.0 | 3.09e-01 | 100.0% | 80.5% |
| 1w98B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 36.0 | 2.90e-01 | 70.6% | 72.1% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.54 | 43.0 | 2.71e-01 | 100.0% | 72.4% |
| 2k89A00 | 3.10.20.870 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain | 0.53 | 34.0 | 3.30e-01 | 85.3% | 55.0% |
| 2pw9C02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 33.0 | 3.48e-01 | 100.0% | 70.7% |
| 3m1tA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.52 | 44.0 | 3.01e-01 | 98.5% | 56.5% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 43.0 | 3.57e-01 | 100.0% | 75.0% |
| 3fdfA02 | 6.10.140.550 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 29.0 | 3.08e-01 | 100.0% | 64.3% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.50 | 38.0 | 3.17e-01 | 88.2% | 55.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3192072 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 37.0 | 4.28e-01 | 95.6% | 67.3% |
| 5004198 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.68 | 35.0 | 4.38e-01 | 100.0% | 94.3% |
| None | — | 0.59 | 47.0 | 2.72e-01 | 91.2% | 42.0% | |
| 3203770 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 33.0 | 3.59e-01 | 100.0% | 74.5% |
| 4988512 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.53 | 36.0 | 2.76e-01 | 72.1% | 30.3% |
| 4993539 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.53 | 43.0 | 3.24e-01 | 95.6% | 96.4% |
| 3420078 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.52 | 36.0 | 2.13e-01 | 73.5% | 14.5% |
| 5010744 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 37.0 | 3.75e-01 | 100.0% | 80.0% |
| 3415555 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 36.0 | 2.42e-01 | 72.1% | 37.6% |
| 4317544 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.51 | 41.0 | 3.57e-01 | 85.3% | 72.0% |
| 4628855 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.51 | 35.0 | 2.62e-01 | 72.1% | 89.5% |
| 3938541 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.51 | 33.0 | 3.50e-01 | 85.3% | 76.7% |
| 4112188 | 206.1.3.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N | 0.51 | 39.0 | 2.62e-01 | 91.2% | 92.7% |
| 3484798 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 31.0 | 2.94e-01 | 100.0% | 47.1% |
| None | — | 0.51 | 36.0 | 2.39e-01 | 75.0% | 81.0% |