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ON981384.1UXQ89132.1X__00024

Bact-Vir

ON981384.1__UXQ89132.1__X__00024

Identity

Accession:: ON981384 ↗
Kingdom:: phage

Quality

84.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_MinM1

TaxID: 2968431

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-90

PDB

Domain cluster: rep: OR475272.1__WNM67085.1__SEA_SCHOMBER_64__00064__D3-92

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01807.26 best	Zn_ribbon_DnaG	89.8	1.10e-25	100.0%	85.7%

D2 medium residues 121-350

PDB

Domain cluster: rep: gwf2_scaffold_96_prodigal-single.1__X__X__00228__D163-380

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23639.2 best	DUF7146	64.9	1.10e-17	54.4%	99.1%
PF13362.13	Toprim_3	48.2	1.70e-12	42.2%	94.7%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ymbA00	3.30.870.30	Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain	0.65	32.0	3.86e-01	82.2%	69.3%
1a1vA01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.61	26.0	3.35e-01	82.6%	65.9%
1isiA02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.58	28.0	3.71e-01	87.4%	81.2%
3gpgA00	3.40.220.10	Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1	0.55	31.0	3.61e-01	84.8%	75.9%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3948961	2006.1.3.15 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3	0.87	44.0	6.13e-01	97.8%	92.8%
4078805	2006.1.3.0 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain	0.80	39.0	5.35e-01	97.8%	88.0%
4675929	2006.1.3.6 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2	0.80	39.0	5.42e-01	97.4%	89.6%
3978060	4023.1.1.3 ↗	a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DUF7146	0.78	35.0	5.42e-01	71.7%	100.0%
5053984	2006.1.3.2 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim	0.76	35.0	4.85e-01	80.9%	85.0%
4617834	2006.1.3.15 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3	0.69	43.0	4.97e-01	100.0%	82.9%
4991816	2007.1.11.0 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › L-fucose isomerase, N-terminal and second domains	0.65	30.0	3.96e-01	89.1%	76.2%
3743507	7522.1.1.0 ↗	a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like	0.65	34.0	4.51e-01	94.3%	91.2%
3170897	7522.1.1.0 ↗	a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like	0.64	33.0	4.26e-01	94.3%	85.2%
3945468	2006.1.3.4 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TraI_C	0.59	50.0	5.01e-01	87.4%	92.6%
3733860	2006.1.1.28 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › APP1_cat	0.58	35.0	3.29e-01	93.0%	47.5%
3805582	7570.1.1.4 ↗	a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › PF27239	0.54	32.0	3.74e-01	94.8%	80.6%
4946664	2004.1.1.16 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf	0.50	30.0	3.38e-01	87.4%	73.5%