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ON981384.1UXQ89149.1X__00041

Bact-Vir

ON981384.1__UXQ89149.1__X__00041

Identity

Accession:: ON981384 ↗
Kingdom:: phage

Quality

73.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_MinM1

TaxID: 2968431

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-110

PDB

Domain cluster: rep: MW960030.1__QWY82978.1__X__00024__D5-103

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02195.27 best	ParB_N	50.5	2.70e-13	96.0%	81.5%

D2 high residues 361-478_523-534

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3t46A00	1.20.1270.10	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.61	33.0	4.16e-01	84.6%	89.3%
7craA02	1.20.58.1480	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.58	34.0	3.99e-01	96.2%	81.5%
3crdA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.57	42.0	4.67e-01	88.5%	99.0%
2lwdA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.57	40.0	4.48e-01	96.2%	97.9%
6wfqC01	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.55	33.0	3.24e-01	98.5%	53.5%
2yviA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.54	36.0	4.17e-01	95.4%	100.0%
3c7jA02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.54	37.0	3.61e-01	70.0%	100.0%
5jajA03	1.20.1320.30	Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 ›	0.53	42.0	4.47e-01	97.7%	95.7%
1ileA03	1.10.730.10	Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1	0.53	38.0	3.42e-01	74.6%	96.9%
2mqaA00	1.10.274.60	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain	0.50	36.0	3.73e-01	75.4%	86.4%
1ah7A00	1.10.575.10	Mainly Alpha › Orthogonal Bundle › P1 Nuclease › P1 Nuclease	0.50	41.0	3.36e-01	88.5%	92.2%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5024109	3646.1.1.1 ↗	alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ	0.58	47.0	3.94e-01	87.7%	94.2%
4045754	110.1.1.18 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death_Lrrd1	0.58	44.0	4.77e-01	91.5%	100.0%
3508526	180.1.1.6 ↗	alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › FIT	0.57	45.0	3.72e-01	83.8%	80.4%
3267787	110.1.1.0 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain	0.57	41.0	4.54e-01	94.6%	97.0%
4031062	3646.1.1.1 ↗	alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ	0.54	48.0	3.94e-01	97.7%	90.8%
3594858	2006.1.1.0 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like	0.53	48.0	3.51e-01	100.0%	47.9%
4982588	3646.1.1.1 ↗	alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ	0.53	47.0	3.83e-01	98.5%	85.2%
4216527	563.1.1.1 ↗	alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP	0.51	28.0	3.01e-01	100.0%	60.9%

D3 high residues 541-606

PDB

D4 medium residues 153-204

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1y9zB01	3.40.50.200	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain	0.67	58.0	3.64e-01	100.0%	54.3%
2dbhA01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.60	44.0	3.93e-01	82.7%	57.0%
4ociA01	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.59	45.0	4.25e-01	94.2%	68.2%
4pcaB00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.53	44.0	3.01e-01	98.1%	45.0%
3ungC02	1.10.10.1720	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CRISPR-Cas system, Cmr2 subunit, D2 domain, helical bundle	0.53	35.0	3.24e-01	71.2%	100.0%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1481859	108.1.1.1 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1	0.59	45.0	4.25e-01	94.2%	68.2%
193851	110.1.1.0 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain	0.57	41.0	3.45e-01	80.8%	49.0%
3974753	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.53	38.0	2.43e-01	76.9%	63.1%
3625523	4156.1.1.4 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C	0.53	39.0	3.00e-01	82.7%	40.0%
2990069	4156.1.1.0 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like	0.50	38.0	2.96e-01	86.5%	41.2%

D5 medium residues 210-318

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1l1qA00	3.40.50.2020	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.56	39.0	3.33e-01	72.5%	94.5%
4g0bA01	3.30.559.10	Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain	0.52	37.0	3.06e-01	75.2%	55.6%
4v2pA02	3.40.47.10	Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase	0.51	37.0	3.34e-01	76.1%	92.9%
6pqhA02	3.30.930.10	Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2	0.51	41.0	2.92e-01	89.9%	67.1%
1nnhA00	3.30.930.10	Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2	0.50	42.0	3.15e-01	92.7%	64.5%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4023424	2002.1.1.0 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels	0.57	50.0	3.26e-01	97.2%	77.8%
3364901	323.1.1.7 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase	0.55	40.0	3.19e-01	75.2%	54.4%
3309403	323.1.1.7 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase	0.52	37.0	3.00e-01	74.3%	56.7%

D6 medium residues 634-693

PDB