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OP009266.1__UUV43072.1__RCAQUAPHINA_102__00102
Bact-VirOP009266.1__UUV43072.1__RCAQUAPHINA_102__00102
Identity
- Accession:
- OP009266 ↗
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Taxonomy
TaxID: 2970508
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-75
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.65 | 36.0 | 4.02e-01 | 100.0% | 69.1% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 39.0 | 3.19e-01 | 83.1% | 31.3% |
| 1rtqA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 48.0 | 3.27e-01 | 100.0% | 29.2% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.56 | 40.0 | 3.96e-01 | 77.5% | 100.0% |
| 7mdhA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.56 | 41.0 | 3.19e-01 | 80.3% | 89.6% |
| 4f9zA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 46.0 | 4.14e-01 | 100.0% | 66.0% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.55 | 37.0 | 3.49e-01 | 70.4% | 68.1% |
| 5yjlC02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.55 | 48.0 | 4.20e-01 | 100.0% | 72.1% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.55 | 44.0 | 2.89e-01 | 91.5% | 42.3% |
| 3lkbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 43.0 | 3.33e-01 | 87.3% | 95.2% |
| 1zatA02 | 2.40.440.10 | Mainly Beta › Beta Barrel › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like | 0.54 | 37.0 | 3.19e-01 | 73.2% | 61.8% |
| 2arzA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.53 | 47.0 | 4.40e-01 | 100.0% | 80.7% |
| 2wadA04 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 42.0 | 2.74e-01 | 87.3% | 95.6% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.42e-01 | 78.9% | 90.7% |
| 4uulA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.53 | 39.0 | 3.05e-01 | 83.1% | 89.0% |
| 4isyC01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 45.0 | 3.70e-01 | 100.0% | 72.1% |
| 1rjtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 33.0 | 3.35e-01 | 80.3% | 63.0% |
| 5kolD00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.51 | 41.0 | 3.29e-01 | 97.2% | 72.1% |
| 1vw4502 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 43.0 | 4.06e-01 | 100.0% | 93.5% |
| 4nwyA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 41.0 | 3.55e-01 | 97.2% | 55.5% |
| 1v1hB00 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.51 | 29.0 | 2.60e-01 | 70.4% | 37.6% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.50 | 40.0 | 3.71e-01 | 97.2% | 67.4% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.50 | 42.0 | 4.14e-01 | 100.0% | 89.9% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3664655 | 601.28.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › PHD_Oberon | 0.57 | 42.0 | 3.38e-01 | 78.9% | 57.3% |
| 1177166 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 32.0 | 3.86e-01 | 70.4% | 88.6% |
| 4530382 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.55 | 49.0 | 2.91e-01 | 100.0% | 19.3% |
| 4322826 | 2004.1.1.525 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B | 0.55 | 49.0 | 2.91e-01 | 100.0% | 19.3% |
| 4108862 | 2004.1.1.525 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B | 0.55 | 48.0 | 3.05e-01 | 100.0% | 26.8% |
| 4407693 | 2004.1.1.525 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B | 0.55 | 48.0 | 3.13e-01 | 100.0% | 27.2% |
| 3936766 | 2485.1.1.43 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_6 | 0.54 | 44.0 | 3.98e-01 | 100.0% | 65.0% |
| 4114778 | 2004.1.1.525 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_27, SbcC_Walker_B | 0.54 | 48.0 | 2.84e-01 | 100.0% | 15.9% |
| 4480602 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.54 | 48.0 | 2.88e-01 | 100.0% | 16.8% |
| 3218472 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.53 | 45.0 | 3.86e-01 | 100.0% | 68.0% |
| 3806989 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.53 | 42.0 | 2.91e-01 | 90.1% | 74.7% |
| 4440404 | 4325.1.1.15 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF26354 | 0.53 | 45.0 | 3.92e-01 | 100.0% | 69.2% |
| 3636361 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.53 | 44.0 | 3.81e-01 | 100.0% | 71.2% |
| 5037595 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.52 | 46.0 | 2.91e-01 | 100.0% | 19.7% |
| 3257727 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 44.0 | 3.70e-01 | 100.0% | 60.8% |
| 3699135 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.52 | 43.0 | 3.60e-01 | 100.0% | 72.0% |
| 3179468 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.52 | 44.0 | 3.50e-01 | 100.0% | 75.0% |
| 3546438 | 4307.1.1.38 ↗ | alpha duplicates or obligate multimers › EB1 dimerisation domain-like › EB1 dimerisation domain-like › EB1 dimerisation domain-like › PF28678 | 0.52 | 40.0 | 3.50e-01 | 88.7% | 73.3% |
| 3730512 | 6.1.1.31 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Beta_trefoil_fun | 0.52 | 43.0 | 3.30e-01 | 97.2% | 85.6% |
| 3836411 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.51 | 36.0 | 3.78e-01 | 100.0% | 88.3% |
| 3930352 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.51 | 42.0 | 3.53e-01 | 95.8% | 55.6% |
| 4995724 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 44.0 | 3.31e-01 | 100.0% | 55.3% |
| 3967506 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.51 | 39.0 | 2.80e-01 | 85.9% | 73.8% |
| 3606531 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.51 | 43.0 | 2.82e-01 | 100.0% | 30.4% |
| 4012191 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 37.0 | 3.33e-01 | 76.1% | 71.6% |
| 4330094 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.51 | 41.0 | 3.90e-01 | 95.8% | 78.9% |
| 3659899 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 42.0 | 2.70e-01 | 95.8% | 95.4% |
| 5045400 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.51 | 43.0 | 2.77e-01 | 100.0% | 25.2% |
| 3613921 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.50 | 42.0 | 3.65e-01 | 100.0% | 86.4% |
| 3917010 | 243.3.1.20 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 | 0.50 | 42.0 | 3.64e-01 | 100.0% | 75.2% |
| 3946051 | 2485.1.1.81 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TraF | 0.50 | 43.0 | 3.67e-01 | 100.0% | 88.0% |
| 3722095 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.50 | 39.0 | 2.59e-01 | 87.3% | 80.8% |
| 4996952 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.50 | 38.0 | 2.94e-01 | 84.5% | 86.1% |