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OP009268.1__UUV43205.1__RCCWILLIS_33__00033

Bact-Vir

OP009268.1__UUV43205.1__RCCWILLIS_33__00033

Identity

Accession:
OP009268 ↗
Kingdom:
phage

Quality

78.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casjensviridae› Rhodobacter_phage_RcCWillis

TaxID: 2970510

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-149
PDB
Domain cluster: rep: ON453901.1__WAK79567.1__X__00040__D22-109
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1c5eA00 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.84 67.0 7.11e-01 100.0% 93.7%
6xgqb01 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.83 67.0 7.23e-01 100.0% 97.8%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 31.0 3.47e-01 100.0% 68.2%
1wu2A04 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.56 35.0 4.09e-01 97.2% 89.6%
3gqhA01 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.55 50.0 4.82e-01 98.1% 97.6%
3g8rA02 3.90.1210.10 Alpha Beta › Alpha-Beta Complex › Type Iii Antifreeze Protein Isoform Hplc 12 › Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain 0.51 29.0 3.31e-01 95.4% 75.3%
3girA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.50 30.0 3.46e-01 78.7% 82.1%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002645 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.85 46.0 6.23e-01 96.3% 98.3%
2640772 70.4.1.1 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › HDPD 0.83 67.0 6.99e-01 100.0% 91.0%
3602933 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.73 43.0 5.47e-01 73.1% 98.5%
5024766 7550.1.1.5 ↗ a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › DUF7839 0.73 37.0 3.24e-01 90.7% 33.8%
3945811 70.4.1.7 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › XM1_gp53_minor_capsid 0.69 39.0 5.05e-01 73.1% 100.0%
5083816 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.68 42.0 5.17e-01 98.1% 95.7%
4990371 70.1.1.0 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like 0.59 37.0 4.49e-01 92.6% 97.1%
5049149 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.57 37.0 4.48e-01 97.2% 98.6%
4937267 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.56 50.0 4.83e-01 100.0% 86.7%
5033307 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.56 51.0 4.69e-01 100.0% 82.9%
3415364 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 35.0 2.70e-01 100.0% 28.2%
4930449 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.55 37.0 4.32e-01 97.2% 98.7%
5030835 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.55 38.0 4.27e-01 96.3% 91.8%
3946545 1.1.8.21 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J 0.54 33.0 3.76e-01 76.9% 78.8%
3603211 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.54 37.0 4.21e-01 92.6% 95.0%
4956897 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.54 37.0 4.20e-01 97.2% 95.0%
2984229 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.54 36.0 4.08e-01 95.4% 94.9%
4975521 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.52 37.0 4.16e-01 93.5% 95.3%