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OP009268.1UUV43223.1RCCWILLIS_51__00051

Bact-Vir

OP009268.1__UUV43223.1__RCCWILLIS_51__00051

Identity

Accession:: OP009268 ↗
Kingdom:: phage

Quality

92.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casjensviridae› Rhodobacter_phage_RcCWillis

TaxID: 2970510

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-86

PDB

Domain cluster: rep: OQ508958.1__WGH49937.1__X__00028__D1-82

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00959.25 best	Phage_lysozyme	31.6	2.50e-07	81.3%	43.2%

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
8hp8A01	1.10.530.40	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.82	70.0	5.48e-01	93.3%	47.7%
2anvA00	1.10.530.40	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.78	70.0	5.63e-01	100.0%	54.1%
6h9dA00	1.10.530.40	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.76	67.0	5.40e-01	100.0%	52.0%
3hdeC00	1.10.530.40	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.73	63.0	4.94e-01	98.7%	50.6%
4evxA00	1.10.1740.240	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A ›	0.68	59.0	5.48e-01	98.7%	78.4%
152lA00	1.10.530.40	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.64	50.0	3.90e-01	84.0%	54.3%
4dq5B00	1.10.530.50	Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40	0.61	52.0	4.11e-01	97.3%	55.6%
3nftA00	1.20.1710.10	Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like	0.60	47.0	3.25e-01	85.3%	82.1%
1cjaA02	1.10.1070.11	Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain	0.58	39.0	2.99e-01	84.0%	28.8%
3p0jA03	1.10.240.10	Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase	0.56	44.0	4.11e-01	86.7%	98.9%
7vyjB01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.54	44.0	3.36e-01	90.7%	92.5%
1ny8A00	3.30.300.90	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like	0.52	28.0	2.64e-01	88.0%	37.1%
2o0aA00	3.40.850.20	Alpha Beta › 3-Layer(aba) Sandwich › Kinesin ›	0.51	39.0	2.65e-01	80.0%	64.3%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2488339	235.1.1.6 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme	0.76	67.0	5.40e-01	100.0%	52.0%
3949298	235.1.1.6 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme	0.75	65.0	4.98e-01	98.7%	44.6%
2771202	235.1.1.6 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme	0.73	66.0	5.14e-01	100.0%	50.0%
3974990	235.1.1.6 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme	0.71	61.0	5.43e-01	98.7%	70.9%
3596937	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.71	40.0	3.61e-01	92.0%	41.0%
3944610	235.1.1.6 ↗	a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme	0.68	59.0	4.74e-01	100.0%	49.1%
3631227	109.4.1.1403 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TBCD, ARM_TBCD_2nd	0.52	39.0	2.34e-01	81.3%	27.2%
3253268	4.1.1.41 ↗	beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C	0.52	38.0	2.96e-01	80.0%	66.3%
3170889	109.4.1.148 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1	0.52	45.0	2.68e-01	98.7%	26.4%
5035335	298.1.1.42 ↗	a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA	0.51	34.0	2.23e-01	70.7%	66.8%
5049590	1015.1.1.2 ↗	alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Caroten_synth	0.51	43.0	2.96e-01	98.7%	78.3%
3273089	12.3.1.18 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydr_116N	0.50	41.0	2.69e-01	94.7%	98.1%

D2 medium residues 87-157

PDB

Domain cluster: rep: OP131588.1__UZV40213.1__Acica_08__00008__D106-210

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00959.25 best	Phage_lysozyme	36.9	6.00e-09	87.3%	41.6%