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OP009268.1__UUV43239.1__RCCWILLIS_67__00067
Bact-VirOP009268.1__UUV43239.1__RCCWILLIS_67__00067
Identity
- Accession:
- OP009268 ↗
- Kingdom:
- phage
Quality
84.5
mean pLDDT
Taxonomy
TaxID: 2970510
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-105
Domain cluster:
rep: MG674163.1__AUG85482.1__SHab15497_00040__00036__D15-126
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18909.6 best | dGTP_diPhyd_N | 71.6 | 6.40e-20 | 100.0% | 80.8% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.65 | 57.0 | 4.08e-01 | 97.6% | 69.6% |
| 6ks6G01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.63 | 55.0 | 3.92e-01 | 97.6% | 66.5% |
| 4c2uA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 46.0 | 4.66e-01 | 92.9% | 77.8% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 45.0 | 4.42e-01 | 76.2% | 78.5% |
| 4lqkA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.62 | 50.0 | 4.33e-01 | 100.0% | 56.8% |
| 4fp4A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 50.0 | 3.60e-01 | 91.7% | 45.3% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.60 | 44.0 | 4.34e-01 | 78.6% | 97.7% |
| 7oq4Z01 | 1.20.120.950 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 | 0.59 | 38.0 | 3.66e-01 | 78.6% | 55.1% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 44.0 | 4.34e-01 | 88.1% | 75.8% |
| 2kbwA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.56 | 49.0 | 4.05e-01 | 98.8% | 57.5% |
| 4fbcA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.54 | 45.0 | 3.64e-01 | 94.0% | 71.3% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 41.0 | 3.17e-01 | 83.3% | 64.3% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.53 | 39.0 | 3.82e-01 | 96.4% | 72.5% |
| 2w4sA00 | 1.10.10.1440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain | 0.52 | 31.0 | 3.16e-01 | 70.2% | 58.1% |
| 3ajfA00 | 1.20.1440.190 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein | 0.52 | 44.0 | 4.28e-01 | 95.2% | 90.2% |
| 3fhnA02 | 1.20.58.1420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain B | 0.52 | 45.0 | 4.10e-01 | 100.0% | 83.8% |
| 1exzB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 42.0 | 3.62e-01 | 90.5% | 67.1% |
| 4jgwA02 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.51 | 41.0 | 3.08e-01 | 91.7% | 80.0% |
| 1qdbA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 43.0 | 3.54e-01 | 89.3% | 57.3% |
| 2dgzA01 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.51 | 37.0 | 3.67e-01 | 96.4% | 73.0% |
| 2w3sA05 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.50 | 44.0 | 4.13e-01 | 97.6% | 97.1% |
| 2qddA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 45.0 | 3.88e-01 | 100.0% | 80.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3221764 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.70 | 52.0 | 5.36e-01 | 81.0% | 82.5% |
| 4616546 | 6155.1.1.4 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MPC | 0.69 | 53.0 | 4.87e-01 | 81.0% | 63.8% |
| 4979232 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.69 | 52.0 | 4.39e-01 | 83.3% | 48.9% |
| 5022186 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.67 | 49.0 | 4.84e-01 | 77.4% | 83.3% |
| 4946914 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.61 | 51.0 | 4.30e-01 | 92.9% | 59.3% |
| 4410680 | 2003.1.2.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like | 0.61 | 42.0 | 2.85e-01 | 71.4% | 82.9% |
| 3568721 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.59 | 52.0 | 4.79e-01 | 100.0% | 74.5% |
| 1116947 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.59 | 49.0 | 3.45e-01 | 95.2% | 70.8% |
| 3734742 | 2003.1.2.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8, Pyr_redox_3 | 0.57 | 40.0 | 2.75e-01 | 72.6% | 45.9% |
| 3688792 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.56 | 48.0 | 3.49e-01 | 96.4% | 66.5% |
| 4476660 | 192.8.1.478 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › BAG6 | 0.56 | 41.0 | 3.62e-01 | 78.6% | 61.6% |
| 4179875 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.55 | 41.0 | 3.50e-01 | 81.0% | 46.9% |
| 3243608 | 5001.1.1.54 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc | 0.54 | 41.0 | 2.87e-01 | 79.8% | 67.8% |
| 3233698 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.53 | 39.0 | 3.53e-01 | 82.1% | 58.4% |
| 143057 | 3825.1.1.1 ↗ | alpha arrays › Non-structural protein 3 › Non-structural protein 3 › Non-structural protein 3 › Tenui_NS3 | 0.52 | 44.0 | 4.28e-01 | 95.2% | 90.2% |
| 3744380 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.52 | 42.0 | 3.03e-01 | 89.3% | 63.5% |
| 4034518 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.52 | 38.0 | 2.56e-01 | 79.8% | 26.6% |
| 3772128 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.51 | 45.0 | 2.82e-01 | 96.4% | 83.4% |
| 3641564 | 3818.1.1.1 ↗ | alpha arrays › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX RNA-binding domain › PHAX_RNA-bd | 0.51 | 33.0 | 3.26e-01 | 73.8% | 61.1% |
| 3395488 | 148.1.3.113 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_TRIP13_C | 0.50 | 35.0 | 3.28e-01 | 82.1% | 57.1% |
D2
high
residues 146-223