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OP009274.1__UUV43769.1__RCKICKAPOO_28__00028

Bact-Vir

OP009274.1__UUV43769.1__RCKICKAPOO_28__00028

Identity

Accession:
OP009274 ↗
Kingdom:
phage

Quality

77.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodobacter_phage_RcKickapoo

TaxID: 2970516

Cluster

View cluster (20 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 134-145_483-675
PDB
Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27249.1 best MJ0330_N 45.1 1.20e-11 98.5% 58.0%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o0jA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.86 66.0 6.08e-01 100.0% 63.8%
3vkgA17 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 40.0 5.00e-01 100.0% 91.9%
7bvaA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.69 47.0 4.56e-01 79.5% 61.9%
6l5oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 56.0 5.71e-01 99.5% 86.8%
1gm5A05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 48.0 5.38e-01 96.1% 92.0%
8kcaB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 50.0 5.40e-01 99.5% 91.8%
8f5dA05 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.63 45.0 4.44e-01 81.0% 67.9%
3eccA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 42.0 4.70e-01 100.0% 86.4%
3h1tA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 53.0 5.32e-01 100.0% 90.3%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 51.0 4.04e-01 100.0% 43.4%
4lyaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 48.0 4.24e-01 100.0% 58.0%
2ht1A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 52.0 5.04e-01 100.0% 81.8%
1w4bA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 39.0 3.82e-01 100.0% 58.0%
1pjqA04 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.60 34.0 4.34e-01 100.0% 96.5%
4bgdA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 5.48e-01 95.6% 96.6%
2gnoA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 38.0 4.50e-01 100.0% 94.1%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 50.0 4.97e-01 100.0% 85.4%
3bs4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 51.0 4.82e-01 100.0% 78.0%
3crvA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 52.0 5.30e-01 100.0% 99.0%
8ouzD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 53.0 5.16e-01 100.0% 90.8%
8gj8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 53.0 4.96e-01 100.0% 85.6%
1m6eX02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 49.0 4.83e-01 95.1% 87.4%
7xexC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 5.15e-01 96.1% 97.5%
7l9pE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 4.43e-01 99.5% 78.8%
4obxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 50.0 4.77e-01 95.6% 88.9%
3v2bA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.55 43.0 4.58e-01 95.6% 94.3%
5jioA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.55 39.0 3.91e-01 99.0% 69.9%
4zi6C01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.54 39.0 4.29e-01 92.2% 90.5%
1ltqA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 36.0 4.21e-01 99.0% 95.8%
2p67A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 4.25e-01 83.9% 85.9%
4wnyA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 33.0 3.98e-01 99.0% 94.7%
1c25A00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.53 35.0 3.86e-01 85.9% 82.6%
1yd9B00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.53 44.0 4.57e-01 96.1% 95.7%
7z67A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 4.26e-01 85.9% 94.5%
6bogA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 47.0 4.73e-01 97.1% 97.1%
2y53A02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.52 47.0 4.69e-01 99.0% 93.6%
5d8nA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.52 41.0 4.32e-01 92.2% 91.0%
6z6fA01 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.52 47.0 3.83e-01 97.1% 91.4%
5ailA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.52 42.0 4.48e-01 96.6% 98.3%
3mwyW04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 48.0 4.35e-01 99.0% 97.4%
5irmC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 3.93e-01 100.0% 74.1%
3eozB01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.52 40.0 4.35e-01 100.0% 100.0%
3q71A00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.50 43.0 4.33e-01 96.1% 90.6%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942031 2004.1.1.102 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.86 69.0 5.79e-01 100.0% 52.8%
4031261 2004.1.1.102 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.86 69.0 5.78e-01 100.0% 52.3%
4988088 2004.1.1.99 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.84 65.0 6.17e-01 100.0% 68.9%
5031051 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 64.0 5.85e-01 100.0% 61.5%
4030936 2004.1.1.102 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.84 70.0 5.85e-01 100.0% 54.2%
3603125 2004.1.1.1077 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27249 0.83 75.0 6.32e-01 100.0% 61.3%
2755868 2004.1.1.102 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.82 66.0 5.98e-01 100.0% 63.4%
3590724 2004.1.1.102 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.82 66.0 5.65e-01 100.0% 54.8%
4995714 2004.1.1.1077 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27249 0.79 74.0 6.93e-01 99.0% 82.9%
3587034 2004.1.1.102 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.79 66.0 5.57e-01 100.0% 55.1%
5006442 213.1.1.120 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NAT10_TcmA_helicase 0.74 59.0 4.03e-01 100.0% 25.6%
3640712 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.73 47.0 5.62e-01 100.0% 94.3%
3960880 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 35.0 4.30e-01 100.0% 77.7%
3507579 2004.1.1.93 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy 0.67 40.0 4.80e-01 100.0% 88.1%
3609341 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.65 43.0 3.83e-01 100.0% 48.2%
3253646 2004.1.1.425 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 0.65 43.0 4.46e-01 100.0% 71.6%
4021403 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.63 42.0 3.99e-01 100.0% 56.7%
3877788 2004.1.1.425 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 0.63 42.0 4.36e-01 100.0% 70.3%
3597327 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 42.0 4.06e-01 100.0% 61.3%
4028442 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.62 43.0 4.51e-01 100.0% 77.3%
3744778 2004.1.1.415 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N 0.62 42.0 4.12e-01 100.0% 63.1%
3738878 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.61 42.0 4.10e-01 100.0% 62.2%
3711081 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.61 57.0 5.14e-01 100.0% 76.7%
3177457 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.61 43.0 4.58e-01 100.0% 80.5%
None — 0.61 38.0 4.08e-01 97.1% 72.0%
4876204 1.1.15.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.61 24.0 3.84e-01 75.6% 97.3%
3268462 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.59 41.0 4.23e-01 99.5% 72.8%
4680580 2004.1.1.415 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N 0.59 41.0 3.96e-01 100.0% 60.9%
4431141 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.58 41.0 4.11e-01 100.0% 68.8%
3595305 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 54.0 3.85e-01 100.0% 38.6%
3253922 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 53.0 4.92e-01 100.0% 79.4%
3370639 2004.1.1.24 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.57 54.0 3.72e-01 100.0% 43.6%
4586847 2004.1.1.364 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.57 54.0 4.93e-01 100.0% 85.4%
3435952 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.57 50.0 4.54e-01 92.2% 87.9%
4090348 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.57 53.0 4.83e-01 100.0% 82.6%
4029190 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.57 50.0 4.36e-01 92.2% 96.6%
None — 0.57 53.0 3.57e-01 100.0% 60.7%
3686390 2004.1.1.602 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3, SnAC 0.57 52.0 3.59e-01 100.0% 65.8%
3665927 2004.1.1.415 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N 0.57 43.0 4.33e-01 100.0% 76.7%
3833866 2004.1.1.24 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.56 52.0 3.49e-01 100.0% 58.3%
9727 2004.1.1.428 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.56 52.0 4.35e-01 100.0% 93.9%
4091592 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.56 52.0 3.76e-01 99.5% 49.9%
3744832 2004.1.1.24 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.56 52.0 3.53e-01 100.0% 29.5%
3390038 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.56 48.0 4.50e-01 92.2% 89.0%
4022630 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 51.0 4.89e-01 99.5% 97.9%
3219991 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.56 48.0 4.02e-01 90.7% 89.6%
3727265 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.56 48.0 4.40e-01 92.2% 92.2%
3496639 2004.1.1.24 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.55 51.0 3.67e-01 100.0% 38.3%
3679779 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 48.0 4.31e-01 92.2% 85.6%
3809981 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 51.0 4.59e-01 99.5% 95.4%
3777503 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 48.0 4.08e-01 92.2% 90.6%
3276594 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 48.0 4.11e-01 90.7% 92.3%
4299491 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.55 38.0 4.32e-01 98.5% 93.3%
3607648 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 51.0 4.39e-01 100.0% 94.4%
4023455 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 48.0 4.13e-01 92.2% 88.1%
3500854 7529.1.1.11 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 0.55 49.0 4.08e-01 97.1% 71.9%
3783121 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 48.0 4.19e-01 92.2% 95.6%
3784944 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.54 46.0 3.89e-01 88.8% 94.2%
3727711 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.54 47.0 4.44e-01 92.2% 93.6%
3410289 7529.1.1.11 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 0.54 49.0 4.63e-01 96.6% 98.8%
3733478 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.54 47.0 4.40e-01 92.2% 86.3%
4566582 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.54 50.0 4.22e-01 99.5% 97.0%
3892447 2004.1.1.428 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.54 47.0 4.40e-01 90.7% 88.2%
3781505 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.54 47.0 4.09e-01 91.7% 78.7%
3885538 7529.1.1.1 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.54 43.0 4.62e-01 95.6% 97.7%
4015807 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 46.0 4.14e-01 91.2% 86.0%
3476632 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.54 47.0 4.15e-01 92.2% 95.5%
None — 0.53 42.0 4.36e-01 100.0% 87.7%
None — 0.53 49.0 4.54e-01 100.0% 94.3%
4995768 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.53 46.0 4.50e-01 91.7% 94.1%
3330972 2004.1.1.24 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.53 45.0 4.26e-01 91.7% 92.8%
3487369 7529.1.1.11 ↗ a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 0.53 47.0 4.54e-01 95.6% 99.6%
3609158 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.53 46.0 4.59e-01 98.5% 89.8%
3347166 2004.1.1.24 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.52 47.0 4.17e-01 95.1% 87.7%
3744616 7574.1.1.10 ↗ a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › XFP_N 0.52 47.0 3.73e-01 96.1% 75.7%
3549038 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.52 48.0 4.08e-01 98.0% 76.9%
3347400 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.51 48.0 3.95e-01 100.0% 84.4%
4298740 2004.1.1.428 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, HDA2-3 0.51 46.0 3.70e-01 97.6% 75.4%
4022079 2004.1.1.366 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.51 43.0 3.79e-01 100.0% 62.0%
D2 high residues 150-252_440-465
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388__D99-198_300-332
D3 high residues 267-433
PDB
Domain cluster: rep: IMGVR_UViG_3300028840_006907-3300028840-Ga0309773_1000015396__D229-404
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14528.12 best LAGLIDADG_3 35.3 1.50e-08 45.5% 65.8%
D4 medium residues 680-743
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ekdA01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.60 42.0 2.72e-01 75.0% 81.5%
8gsxA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 41.0 3.17e-01 73.4% 76.8%
5owvD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 41.0 2.84e-01 73.4% 36.5%
1o5lA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 41.0 3.35e-01 75.0% 61.2%
1qhkA00 3.40.970.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › Ribonuclease H1, N-terminal domain 0.58 40.0 4.36e-01 76.6% 97.9%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.57 39.0 3.92e-01 79.7% 69.7%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.57 44.0 3.62e-01 92.2% 76.3%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 47.0 4.04e-01 98.4% 93.8%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 39.0 2.40e-01 75.0% 32.9%
2orzA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 39.0 3.01e-01 75.0% 61.6%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.55 37.0 2.84e-01 71.9% 59.5%
5jeaD00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.54 43.0 3.05e-01 92.2% 57.6%
3vx8A01 3.40.140.100 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 C-terminal domain 0.54 45.0 3.63e-01 100.0% 90.8%
3kq5A01 1.10.3210.40 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › 0.53 36.0 2.55e-01 71.9% 41.2%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 43.0 3.35e-01 96.9% 87.5%
3ffjA04 2.60.40.4040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 45.0 3.67e-01 100.0% 74.0%
2yuxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.82e-01 100.0% 76.9%
1va0B02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.51 40.0 3.41e-01 92.2% 93.5%
1iyjB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 40.0 3.16e-01 89.1% 67.6%
7pzaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 34.0 2.93e-01 73.4% 64.8%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3675227 4076.1.1.2 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.64 47.0 5.12e-01 82.8% 100.0%
4967510 2003.1.5.42 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.62 43.0 2.88e-01 75.0% 68.6%
3781422 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.60 47.0 2.86e-01 85.9% 32.6%
4989859 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.60 42.0 3.64e-01 75.0% 81.9%
4058514 1137.1.1.1 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.57 47.0 3.76e-01 98.4% 77.2%
3172225 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 41.0 3.61e-01 79.7% 82.0%
3855824 221.1.1.53 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_3 0.55 43.0 3.94e-01 89.1% 87.8%
3703832 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.55 39.0 3.90e-01 84.4% 73.8%
3248947 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.55 38.0 3.68e-01 73.4% 68.0%
3177995 5050.1.1.32 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn 0.54 37.0 2.23e-01 73.4% 37.8%
3276751 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.54 43.0 3.50e-01 87.5% 55.0%
5054792 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.53 42.0 3.84e-01 85.9% 76.5%
3969332 221.1.4.3 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › SLBB_2 0.53 36.0 3.12e-01 71.9% 74.5%
5053737 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.53 44.0 2.93e-01 96.9% 89.8%
3742942 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.53 36.0 3.30e-01 75.0% 68.0%
4028554 10.30.1.0 ↗ beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain 0.52 37.0 3.43e-01 75.0% 95.2%
3909937 382.1.1.2 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP 0.52 38.0 3.61e-01 82.8% 88.1%
3255604 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.51 41.0 3.34e-01 89.1% 56.0%
3501670 7.1.1.1 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.51 33.0 2.83e-01 70.3% 39.1%
3268825 224.1.1.0 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.51 43.0 3.43e-01 96.9% 71.4%
3249371 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.50 42.0 3.42e-01 95.3% 56.9%
3171216 2496.1.1.2 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.50 37.0 2.72e-01 84.4% 85.5%
D5 medium residues 755-771_914-986
PDB
Domain cluster: rep: IMGVR_UViG_3300035202_000225-3300035202-Ga0373640_0021469_8_442__D1-82
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5m1pB00 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.76 70.0 5.40e-01 100.0% 96.8%
2o18A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.63 48.0 3.31e-01 81.1% 49.2%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 40.0 3.71e-01 74.4% 98.2%
1s7hA02 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 37.0 3.84e-01 76.7% 74.4%
3qthB00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.53 39.0 3.33e-01 81.1% 89.0%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 36.0 3.51e-01 77.8% 66.3%
1w23A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 35.0 3.45e-01 74.4% 85.4%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995715 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.86 82.0 5.68e-01 100.0% 99.2%
4988089 2484.1.1.77 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.85 75.0 5.73e-01 93.3% 100.0%
5031041 2484.1.1.77 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.83 78.0 5.86e-01 100.0% 97.9%
5083931 2484.1.1.77 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.80 75.0 5.86e-01 98.9% 100.0%
5041440 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.79 72.0 5.35e-01 97.8% 98.6%
3947877 2484.1.1.86 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease 0.79 70.0 5.20e-01 95.6% 99.5%
4031863 2484.1.1.86 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease 0.78 72.0 5.25e-01 100.0% 94.8%
3587035 2484.1.1.86 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease 0.76 69.0 5.22e-01 100.0% 99.5%
4017266 101.1.8.10 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 0.59 42.0 3.31e-01 74.4% 99.0%
4011394 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.57 41.0 3.28e-01 76.7% 99.0%
3928208 304.163.1.0 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.56 37.0 3.97e-01 76.7% 80.0%
4216985 331.19.1.2 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N 0.52 37.0 3.81e-01 75.6% 92.9%
3406678 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.51 36.0 3.86e-01 73.3% 93.3%
4088600 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.51 38.0 3.89e-01 80.0% 92.9%
3896992 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.51 35.0 3.82e-01 73.3% 93.3%
3739285 206.1.2.4 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin 0.50 37.0 2.78e-01 80.0% 75.7%
D6 medium residues 772-913
PDB
Domain cluster: rep: IMGVR_UViG_3300002053_000531-3300002053-SMTZ23_1006880310__D308-423
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wnsA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.69 41.0 3.64e-01 99.3% 42.1%
2qh9A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.66 44.0 4.04e-01 78.9% 52.8%
2g1uA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 37.0 3.83e-01 100.0% 56.9%
1p5jA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 35.0 4.17e-01 88.7% 78.1%
3ttcA03 3.30.420.360 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.63 44.0 4.72e-01 94.4% 84.3%
5cvcA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 35.0 4.10e-01 91.5% 79.4%
5d84A02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 36.0 3.99e-01 92.3% 76.6%
3vthA03 3.30.420.360 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.59 44.0 4.73e-01 97.9% 92.4%
3gdwB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.59 41.0 4.18e-01 79.6% 72.5%
1f21A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.58 44.0 4.30e-01 78.9% 80.3%
3l4bC01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 37.0 4.05e-01 97.9% 79.5%
3lk7A03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.56 34.0 3.57e-01 99.3% 64.9%
4a0gD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 42.0 3.43e-01 81.0% 88.9%
3d59A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 49.0 3.63e-01 100.0% 78.2%
3r0xA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 37.0 4.01e-01 92.3% 83.7%
6ldqA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 39.0 3.60e-01 76.8% 88.3%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.52 40.0 3.38e-01 79.6% 78.4%
4wz9A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.52 42.0 3.71e-01 86.6% 85.0%
2cg9X01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 28.0 3.19e-01 76.8% 69.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.51 19.0 2.66e-01 86.6% 65.7%
2o2zA00 3.40.50.10680 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CofD-like domains 0.50 46.0 3.57e-01 100.0% 84.2%
3okpA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 38.0 3.48e-01 100.0% 59.8%
1z5hA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.50 39.0 3.67e-01 81.7% 87.6%
2d13A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 38.0 4.18e-01 80.3% 98.2%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995715 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.83 78.0 6.30e-01 100.0% 59.2%
3603126 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.82 64.0 5.47e-01 100.0% 53.8%
4171259 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.72 43.0 4.16e-01 81.7% 52.5%
4010072 2484.1.1.86 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease 0.69 63.0 5.15e-01 100.0% 56.7%
3635381 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 52.0 4.26e-01 79.6% 81.5%
1139064 2484.1.1.80 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C 0.66 43.0 4.85e-01 98.6% 86.1%
3408448 2484.1.1.48 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II 0.66 43.0 3.79e-01 81.0% 45.9%
4939764 2484.1.1.339 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › acVLRF1 0.65 47.0 4.97e-01 78.9% 82.3%
3590481 2484.1.1.9 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.64 43.0 3.81e-01 78.9% 48.0%
3485060 2484.1.1.170 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ZSWIM1-3_RNaseH-like 0.63 48.0 5.12e-01 92.3% 92.0%
5035818 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.61 42.0 4.63e-01 78.9% 86.1%
3616473 2484.1.1.99 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.61 53.0 4.71e-01 100.0% 67.2%
3654114 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.61 46.0 4.03e-01 78.9% 68.6%
5025921 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.60 37.0 4.17e-01 100.0% 80.0%
4940475 2007.25.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 0.59 38.0 4.23e-01 78.2% 80.0%
3514373 2484.1.1.80 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C 0.58 45.0 4.69e-01 95.8% 88.5%
3990080 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.57 45.0 4.68e-01 97.9% 88.9%
3638307 2003.4.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.56 37.0 3.70e-01 92.3% 63.3%
3602582 1075.1.1.60 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › DUF373 0.55 42.0 4.28e-01 79.6% 97.8%
3714755 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.54 41.0 3.40e-01 79.6% 54.4%
3832048 7590.1.1.0 ↗ a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.53 38.0 3.73e-01 80.3% 66.5%
3313040 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.53 43.0 3.83e-01 85.2% 90.0%
3700987 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.53 43.0 3.83e-01 86.6% 88.0%
4948545 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.52 40.0 3.67e-01 81.0% 89.5%
3416094 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.52 43.0 3.74e-01 89.4% 87.7%
3196896 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 40.0 3.00e-01 79.6% 50.5%
3641026 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.52 40.0 3.71e-01 81.7% 84.4%
3869532 2006.1.4.30 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_TASOR 0.52 39.0 3.92e-01 78.9% 92.4%
5025779 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.51 40.0 3.26e-01 82.4% 94.8%
4420266 7580.1.1.1 ↗ a/b three-layered sandwiches › RibA-like › RibA-like › RibA-like › GTP_cyclohydro2 0.51 42.0 4.30e-01 98.6% 94.8%
5063755 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.50 38.0 3.62e-01 80.3% 86.9%
3313202 220.1.1.181 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_ULP 0.50 39.0 4.03e-01 80.3% 91.5%
3649785 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.50 40.0 3.55e-01 85.2% 83.8%
4978811 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.50 38.0 3.38e-01 79.6% 91.7%
3491854 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.50 40.0 3.64e-01 85.9% 85.6%
5028885 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.50 40.0 3.63e-01 84.5% 88.9%