Back to structures

OP009281.1__UUV44507.1__RCMENCHIE_138__00138

Bact-Vir

OP009281.1__UUV44507.1__RCMENCHIE_138__00138

Identity

Accession:
OP009281 ↗
Kingdom:
phage

Quality

65.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 43-87
PDB
Domain cluster: representative
CATH (90)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.73 64.0 4.44e-01 100.0% 83.9%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.72 59.0 5.17e-01 100.0% 71.1%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.69 57.0 4.33e-01 100.0% 55.5%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 59.0 4.07e-01 97.8% 35.7%
3ffjA04 2.60.40.4040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 55.0 3.98e-01 97.8% 31.5%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.69 48.0 4.25e-01 100.0% 50.0%
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.68 55.0 3.74e-01 100.0% 38.9%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.67 54.0 4.42e-01 100.0% 60.2%
6h8oA00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.67 56.0 4.53e-01 100.0% 70.5%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.67 54.0 5.28e-01 100.0% 86.8%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 55.0 4.05e-01 100.0% 34.4%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 58.0 4.23e-01 100.0% 45.6%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.67 55.0 3.87e-01 100.0% 47.3%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.67 54.0 4.29e-01 100.0% 57.8%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 57.0 4.22e-01 100.0% 46.0%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 56.0 4.03e-01 97.8% 39.7%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.66 53.0 4.37e-01 97.8% 97.9%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 57.0 3.77e-01 100.0% 30.4%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.66 48.0 3.34e-01 80.0% 27.0%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 56.0 3.97e-01 97.8% 47.2%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 58.0 3.47e-01 100.0% 26.0%
1et9A01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.65 51.0 4.00e-01 93.3% 90.9%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 55.0 4.51e-01 97.8% 56.5%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 54.0 3.88e-01 100.0% 37.6%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 55.0 3.86e-01 100.0% 35.2%
1ltlA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.65 56.0 5.49e-01 100.0% 93.9%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 55.0 4.00e-01 100.0% 41.5%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 51.0 3.85e-01 100.0% 34.7%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 53.0 3.90e-01 100.0% 39.9%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.65 54.0 4.33e-01 100.0% 56.2%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 53.0 3.86e-01 100.0% 34.5%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.65 52.0 4.09e-01 100.0% 46.8%
2hq7B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 54.0 3.86e-01 97.8% 39.4%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.64 52.0 4.12e-01 91.1% 70.2%
3cjlA00 3.10.20.850 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 0.64 44.0 3.58e-01 73.3% 62.5%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 54.0 4.18e-01 97.8% 61.3%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 53.0 3.52e-01 100.0% 26.5%
1j5yA02 3.30.1340.20 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain 0.64 48.0 3.76e-01 86.7% 95.3%
6gszA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 52.0 4.17e-01 100.0% 48.0%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 54.0 3.86e-01 100.0% 31.2%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 54.0 4.41e-01 100.0% 52.9%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.63 52.0 3.37e-01 100.0% 18.9%
5fljA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 49.0 3.31e-01 100.0% 22.0%
4dohE02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 55.0 4.19e-01 100.0% 42.5%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 52.0 3.46e-01 100.0% 27.5%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.63 46.0 3.53e-01 80.0% 68.3%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 51.0 3.79e-01 100.0% 40.7%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 50.0 4.04e-01 100.0% 66.7%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 48.0 3.27e-01 100.0% 22.2%
6cc0A01 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.62 44.0 3.13e-01 80.0% 26.2%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 4.51e-01 95.6% 92.6%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.62 53.0 3.93e-01 100.0% 73.9%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.62 52.0 3.57e-01 100.0% 32.0%
3weeA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 41.0 2.81e-01 97.8% 16.9%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.61 48.0 4.06e-01 100.0% 56.5%
3weeB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 45.0 3.08e-01 82.2% 80.7%
7bjkA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.60 44.0 3.49e-01 100.0% 34.5%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 50.0 3.47e-01 100.0% 33.3%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.60 51.0 3.43e-01 100.0% 37.8%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 41.0 3.69e-01 77.8% 50.0%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.60 46.0 3.46e-01 97.8% 30.9%
5l10B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.59 44.0 3.09e-01 84.4% 27.1%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.59 43.0 3.04e-01 84.4% 23.0%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 49.0 4.18e-01 100.0% 57.5%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.59 48.0 3.96e-01 100.0% 55.3%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.59 48.0 3.66e-01 100.0% 46.3%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 47.0 3.69e-01 100.0% 49.1%
2ijzA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.58 47.0 3.74e-01 100.0% 65.4%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 46.0 3.64e-01 95.6% 84.7%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 47.0 3.40e-01 100.0% 57.2%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 51.0 3.49e-01 100.0% 29.4%
3buxB03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 42.0 3.62e-01 86.7% 46.5%
2jfdA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.58 47.0 4.33e-01 100.0% 95.5%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.58 47.0 3.79e-01 100.0% 47.5%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 47.0 3.51e-01 100.0% 43.5%
3liuA01 2.60.40.3160 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 47.0 3.58e-01 97.8% 42.4%
4gxbA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 44.0 3.65e-01 97.8% 68.0%
2iciA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 44.0 3.30e-01 100.0% 75.8%
1wvqA00 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.56 45.0 3.23e-01 100.0% 60.1%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 46.0 3.29e-01 100.0% 52.6%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.55 47.0 3.52e-01 100.0% 44.3%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.55 47.0 3.60e-01 100.0% 42.3%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 45.0 3.68e-01 100.0% 52.0%
3dn7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 44.0 3.25e-01 100.0% 35.2%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.55 44.0 3.44e-01 100.0% 50.0%
4b7lA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.51e-01 95.6% 48.0%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.29e-01 100.0% 36.1%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.52 43.0 3.04e-01 100.0% 39.8%
2x5rA01 3.30.470.40 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.52 36.0 2.76e-01 75.6% 57.4%
4ca1B02 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.51 43.0 3.15e-01 100.0% 47.0%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3715676 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 65.0 5.21e-01 100.0% 46.7%
5015713 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.78 64.0 5.92e-01 95.6% 98.3%
5012895 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.77 64.0 6.13e-01 100.0% 94.5%
5080205 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.76 65.0 6.32e-01 100.0% 98.0%
3969006 3115.6.1.2 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.75 65.0 6.59e-01 97.8% 100.0%
4648475 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.75 63.0 5.86e-01 100.0% 91.7%
5053865 821.1.1.0 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.74 61.0 5.03e-01 100.0% 64.4%
4939739 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.74 61.0 5.74e-01 100.0% 91.5%
3287985 10.12.1.40 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC_2 0.74 57.0 3.47e-01 100.0% 13.7%
4004704 3115.6.1.2 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.73 63.0 6.34e-01 100.0% 100.0%
3968122 3115.6.1.2 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.73 61.0 6.20e-01 97.8% 97.8%
4969863 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.73 61.0 5.30e-01 100.0% 72.0%
4937773 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.73 59.0 5.59e-01 97.8% 98.3%
4264427 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.72 62.0 4.60e-01 100.0% 46.7%
4009311 4187.2.1.0 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.72 60.0 5.40e-01 100.0% 67.7%
4007508 3115.6.1.2 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.72 62.0 6.09e-01 100.0% 90.0%
3264847 2492.1.1.36 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › ODR4-like 0.72 60.0 3.93e-01 97.8% 22.4%
3163963 3326.1.1.1 alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind 0.71 43.0 3.15e-01 73.3% 24.5%
3593981 302.1.1.0 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.71 58.0 4.59e-01 100.0% 56.2%
5081134 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.71 58.0 5.38e-01 95.6% 81.7%
3975705 3115.6.1.0 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon 0.71 60.0 5.84e-01 100.0% 90.0%
4031235 3986.2.1.2 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › DUF2922 0.70 60.0 5.27e-01 100.0% 88.6%
4995671 3115.1.1.12 a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 0.70 57.0 5.59e-01 100.0% 92.0%
5067865 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.70 58.0 5.22e-01 100.0% 77.1%
3933380 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.70 58.0 4.44e-01 100.0% 52.2%
4463006 3115.2.1.0 a+b two layers › GP2-like › GP2 › GP2 0.70 55.0 5.56e-01 93.3% 97.8%
3413652 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.70 58.0 5.35e-01 97.8% 78.3%
4655959 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 55.0 4.32e-01 100.0% 41.0%
4012131 302.1.1.0 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.69 58.0 4.34e-01 100.0% 48.8%
3299192 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.69 57.0 4.47e-01 100.0% 51.8%
3606053 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.69 58.0 4.28e-01 100.0% 48.0%
3611195 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.69 60.0 4.53e-01 100.0% 57.3%
3573883 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.69 56.0 4.26e-01 100.0% 50.4%
3665041 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.69 56.0 4.26e-01 100.0% 45.6%
4281749 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.69 55.0 4.27e-01 100.0% 48.3%
3623139 223.1.1.3 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.68 49.0 3.12e-01 80.0% 15.6%
3216210 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.68 54.0 5.38e-01 100.0% 100.0%
3502194 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.68 58.0 4.60e-01 97.8% 67.4%
3707901 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.68 60.0 4.55e-01 100.0% 60.0%
3989046 862.1.1.8 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › AEP-TOTE 0.68 54.0 3.53e-01 93.3% 42.7%
4271892 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.68 57.0 4.25e-01 100.0% 52.8%
4948543 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.68 57.0 4.56e-01 100.0% 57.9%
3285401 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.68 56.0 4.90e-01 100.0% 65.3%
3289401 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.68 53.0 4.00e-01 95.6% 38.5%
4089593 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.68 50.0 3.67e-01 82.2% 68.5%
4937342 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.67 55.0 4.29e-01 100.0% 52.6%
3270102 224.1.1.2 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.67 52.0 3.05e-01 100.0% 10.0%
4420915 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.67 56.0 4.25e-01 100.0% 48.3%
5011570 302.1.1.0 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.67 53.0 4.16e-01 100.0% 50.4%
4345869 302.1.1.0 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.67 54.0 4.26e-01 100.0% 53.6%
4942796 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.67 54.0 4.27e-01 100.0% 53.6%
3888324 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 59.0 4.45e-01 100.0% 54.3%
4204424 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.66 56.0 4.37e-01 100.0% 56.2%
3377737 4.1.1.302 beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O 0.66 57.0 4.38e-01 100.0% 53.3%
3743280 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.66 54.0 4.22e-01 100.0% 49.6%
5078886 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.66 55.0 4.25e-01 100.0% 40.9%
4976679 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.66 53.0 4.21e-01 100.0% 54.5%
4450183 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.65 54.0 4.18e-01 100.0% 51.3%
4088887 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.65 52.0 4.13e-01 100.0% 52.7%
3642320 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.65 57.0 3.51e-01 100.0% 20.0%
4078508 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.65 53.0 4.13e-01 100.0% 51.3%
3942988 4187.2.1.1 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.65 52.0 4.79e-01 97.8% 67.7%
4647537 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.65 51.0 4.11e-01 100.0% 49.1%
4941845 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 53.0 5.04e-01 93.3% 98.1%
3312880 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.65 51.0 3.40e-01 100.0% 21.0%
3972526 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 50.0 4.49e-01 93.3% 94.3%
5043357 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 54.0 4.19e-01 100.0% 46.7%
4625721 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.64 53.0 4.07e-01 100.0% 47.5%
4928513 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.64 51.0 4.16e-01 100.0% 58.3%
4315646 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.64 52.0 4.21e-01 100.0% 58.0%
4939488 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.63 50.0 3.07e-01 91.1% 55.2%
3501768 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.63 55.0 4.79e-01 100.0% 72.9%
5032790 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 54.0 4.23e-01 100.0% 50.0%
3236126 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.63 55.0 3.99e-01 100.0% 73.6%
3615237 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.62 51.0 3.05e-01 100.0% 45.8%
3766042 221.1.1.76 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.62 51.0 3.94e-01 97.8% 56.4%
5046850 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.61 51.0 4.19e-01 100.0% 61.1%
3960302 11.1.1.47 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 0.61 49.0 3.60e-01 100.0% 31.4%
3988697 10.12.1.31 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_5 0.61 54.0 3.63e-01 100.0% 28.0%
5011747 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.60 49.0 4.10e-01 100.0% 54.4%
3170957 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.60 49.0 3.74e-01 97.8% 99.1%
4373012 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.59 46.0 3.74e-01 100.0% 52.7%
4526825 11.1.1.67 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.58 48.0 3.61e-01 100.0% 45.6%
3988748 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.58 49.0 3.53e-01 100.0% 33.8%
3222254 304.9.1.40 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › BRAP2 0.55 41.0 3.34e-01 97.8% 68.9%
4981720 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 44.0 3.21e-01 93.3% 59.3%
3969586 10.32.1.27 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › 7TMR-DISMED2 0.55 45.0 3.22e-01 100.0% 34.0%
3742881 228.1.1.1 a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.54 42.0 3.30e-01 100.0% 39.2%
185509 10.26.1.2 beta sandwiches › jelly-roll › Histone H3 binding protein ORF158L › Histone H3 binding protein ORF158L › ORF158L-like 0.53 44.0 3.29e-01 100.0% 36.1%
2440701 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.53 39.0 2.85e-01 82.2% 32.1%
3970120 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.53 37.0 2.58e-01 75.6% 76.7%
4996589 3662.1.1.4 a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC_bac 0.51 45.0 3.31e-01 100.0% 45.0%