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OP009282.1__UUV44551.1__RCMOTHERGOOSE_41__00041

Bact-Vir

OP009282.1__UUV44551.1__RCMOTHERGOOSE_41__00041

Identity

Accession:
OP009282 ↗
Kingdom:
phage

Quality

81.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Titanvirus› Rhodobacter_phage_RcMotherGoose

TaxID: 2970524

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-122
PDB
Domain cluster: rep: GQ357915.1__ACV50173.1__X__00150__D120-199
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bjoA02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.65 46.0 4.72e-01 73.5% 94.7%
4mh4A02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.64 45.0 4.63e-01 73.5% 94.7%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 45.0 4.76e-01 79.6% 89.4%
3kxwA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.59 44.0 4.07e-01 77.6% 66.9%
3ahpA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 4.06e-01 95.9% 72.6%
5k8mA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 46.0 4.20e-01 95.9% 91.6%
4i5tB00 3.30.428.70 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › ATP adenylyltransferase 0.53 44.0 3.20e-01 94.9% 56.7%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.52 45.0 4.39e-01 99.0% 96.3%
6sjqA00 3.10.20.650 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 38.0 3.65e-01 77.6% 79.1%
3fynA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 36.0 3.18e-01 74.5% 47.4%
1qsmD00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 36.0 3.16e-01 73.5% 49.3%
3sqgB02 3.30.70.470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 44.0 3.93e-01 100.0% 87.6%
6ofsA04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 43.0 3.57e-01 95.9% 87.0%
3by9B01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 37.0 3.43e-01 78.6% 93.1%
5tuuA00 1.20.140.80 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP 0.50 35.0 3.10e-01 77.6% 50.0%
1dusA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 36.0 2.87e-01 74.5% 78.9%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3691700 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.65 47.0 4.17e-01 76.5% 83.8%
4565003 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.62 45.0 4.14e-01 76.5% 68.5%
4228205 324.1.1.1 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.62 45.0 4.04e-01 76.5% 84.3%
4145589 327.13.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system 0.62 46.0 4.55e-01 78.6% 83.8%
4974676 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.61 42.0 3.50e-01 71.4% 80.0%
3971556 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.59 44.0 4.21e-01 78.6% 67.0%
3275756 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.58 49.0 4.28e-01 93.9% 96.1%
3709350 304.31.1.0 ↗ a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase 0.56 45.0 3.71e-01 95.9% 47.8%
3687618 304.9.1.79 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28976 0.55 41.0 3.49e-01 95.9% 47.3%
3915349 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.54 42.0 3.59e-01 85.7% 65.9%
3233222 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.53 41.0 2.89e-01 86.7% 86.1%
3703840 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.53 39.0 3.20e-01 78.6% 74.7%
3193579 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.52 36.0 2.96e-01 71.4% 74.6%
2565083 221.1.1.62 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › BILBO1_N 0.52 38.0 3.65e-01 77.6% 79.1%
3235186 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.52 38.0 3.74e-01 78.6% 70.6%
3620138 3246.1.1.4 ↗ few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAMTS_CR_3 0.51 30.0 3.04e-01 72.4% 54.0%
3777742 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 43.0 2.92e-01 94.9% 42.5%
4950105 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.51 37.0 3.10e-01 77.6% 63.4%
119490 57.1.1.2 ↗ beta complex topology › Cloacin translocation domain › Cloacin translocation domain › Cloacin translocation domain › Pyocin_S 0.50 36.0 3.21e-01 77.6% 64.7%