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OP009285.1__UUV44825.1__RCRUDOLPH_58__00058
Bact-VirOP009285.1__UUV44825.1__RCRUDOLPH_58__00058
Identity
- Accession:
- OP009285 ↗
- Kingdom:
- phage
Quality
73.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-94
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.67 | 46.0 | 4.88e-01 | 82.9% | 83.3% |
| 2vvlA02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.64 | 49.0 | 3.43e-01 | 82.9% | 36.0% |
| 3k7mX02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.63 | 49.0 | 3.47e-01 | 82.9% | 35.9% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 46.0 | 3.98e-01 | 82.9% | 97.2% |
| 4gc8B00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.60 | 49.0 | 3.81e-01 | 95.7% | 63.2% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.59 | 38.0 | 3.97e-01 | 84.3% | 71.2% |
| 1vs3A01 | 3.30.70.580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, N-terminal subdomain | 0.59 | 51.0 | 4.50e-01 | 97.1% | 99.0% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.59 | 44.0 | 4.23e-01 | 82.9% | 92.9% |
| 1dj0A02 | 3.30.70.580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, N-terminal subdomain | 0.58 | 50.0 | 4.36e-01 | 97.1% | 97.2% |
| 3m4rA01 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.57 | 49.0 | 3.59e-01 | 98.6% | 36.3% |
| 1cb9A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.56 | 34.0 | 3.63e-01 | 100.0% | 70.0% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 43.0 | 4.29e-01 | 84.3% | 85.9% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.54 | 41.0 | 3.48e-01 | 84.3% | 52.8% |
| 6nffA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 40.0 | 2.57e-01 | 78.6% | 41.7% |
| 1mg7A01 | 3.30.70.1000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like | 0.53 | 40.0 | 3.09e-01 | 84.3% | 77.1% |
| 2jdjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 3.57e-01 | 82.9% | 90.4% |
| 2yeqA01 | 2.60.40.380 | Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal | 0.52 | 37.0 | 3.24e-01 | 84.3% | 48.6% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 41.0 | 3.13e-01 | 91.4% | 75.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941732 | 3115.6.1.0 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon | 0.65 | 42.0 | 4.67e-01 | 82.9% | 90.0% |
| 5013194 | 3115.4.1.0 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 | 0.61 | 44.0 | 4.79e-01 | 82.9% | 98.2% |
| 1515950 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.58 | 44.0 | 3.87e-01 | 82.9% | 75.9% |
| 3517068 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.57 | 45.0 | 4.67e-01 | 84.3% | 92.3% |
| 3797826 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 49.0 | 3.85e-01 | 98.6% | 74.8% |
| 3395814 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.54 | 42.0 | 3.74e-01 | 98.6% | 58.1% |
| 4983144 | 230.6.1.1 ↗ | a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae | 0.54 | 40.0 | 3.63e-01 | 82.9% | 81.0% |
| 4547058 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.53 | 47.0 | 3.45e-01 | 100.0% | 54.1% |
| 3462310 | 221.6.1.2 ↗ | a+b two layers › beta-Grasp › MM3350-like › MM3350-like › SNAPC3 | 0.53 | 45.0 | 3.55e-01 | 97.1% | 97.4% |
| 3547613 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.11e-01 | 100.0% | 38.9% |
| 4854346 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 39.0 | 2.87e-01 | 82.9% | 40.3% |