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OP009286.1__UUV44856.1__RCSWAN_3__00003
Bact-VirOP009286.1__UUV44856.1__RCSWAN_3__00003
Identity
- Accession:
- OP009286 ↗
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-69
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rq0A01 | 6.10.140.160 | Special › Helix non-globular › Helix Hairpins › | 0.90 | 78.0 | 7.16e-01 | 92.4% | 75.9% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 82.0 | 6.86e-01 | 100.0% | 100.0% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.87 | 66.0 | 6.71e-01 | 80.3% | 85.9% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.84 | 68.0 | 5.37e-01 | 87.9% | 49.6% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 65.0 | 6.27e-01 | 84.8% | 97.3% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.80 | 65.0 | 4.94e-01 | 87.9% | 92.6% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.78 | 69.0 | 5.75e-01 | 100.0% | 88.0% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.77 | 60.0 | 4.59e-01 | 83.3% | 39.9% |
| 7ru9C01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.77 | 54.0 | 3.54e-01 | 74.2% | 20.2% |
| 4dvyP01 | 1.10.357.130 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.73 | 65.0 | 4.56e-01 | 97.0% | 89.8% |
| 2ccyA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.72 | 52.0 | 4.21e-01 | 77.3% | 40.2% |
| 2jifA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.71 | 63.0 | 4.78e-01 | 98.5% | 60.4% |
| 2mpnA00 | 6.10.140.1340 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 49.0 | 4.88e-01 | 80.3% | 76.5% |
| 1wy6A00 | 1.25.40.350 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 42.0 | 3.17e-01 | 74.2% | 26.4% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.66 | 52.0 | 4.87e-01 | 86.4% | 91.6% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.65 | 57.0 | 5.47e-01 | 98.5% | 98.7% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 46.0 | 3.56e-01 | 78.8% | 61.8% |
| 4iv6B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.61 | 45.0 | 3.83e-01 | 81.8% | 70.7% |
| 4jgwA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.61 | 45.0 | 3.48e-01 | 80.3% | 34.6% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 3.52e-01 | 75.8% | 45.6% |
| 1hlvA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 39.0 | 4.12e-01 | 71.2% | 98.3% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 40.0 | 3.73e-01 | 75.8% | 66.3% |
| 1xl7A01 | 1.10.275.20 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Choline/Carnitine o-acyltransferase | 0.50 | 36.0 | 3.08e-01 | 74.2% | 50.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4177674 | 4992.1.1.23 ↗ | extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N | 0.95 | 84.0 | 6.85e-01 | 92.4% | 65.5% |
| 4021907 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.92 | 77.0 | 5.59e-01 | 89.4% | 36.3% |
| 3204414 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.92 | 81.0 | 4.86e-01 | 92.4% | 32.2% |
| 4209030 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.89 | 61.0 | 4.96e-01 | 71.2% | 44.7% |
| 3516432 | 604.29.1.1 ↗ | alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N | 0.88 | 66.0 | 5.54e-01 | 78.8% | 77.1% |
| 3784566 | 604.1.1.191 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF29057 | 0.88 | 68.0 | 5.81e-01 | 81.8% | 96.0% |
| 3300364 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.87 | 64.0 | 4.36e-01 | 77.3% | 24.7% |
| 3940115 | 604.29.1.1 ↗ | alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N | 0.85 | 64.0 | 5.20e-01 | 78.8% | 76.5% |
| 3482539 | 192.8.1.288 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Ada3 | 0.85 | 72.0 | 6.22e-01 | 92.4% | 62.0% |
| 3398541 | 109.4.1.1492 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_SCC3-SA, PF31007 | 0.81 | 60.0 | 3.59e-01 | 78.8% | 32.3% |
| 3780856 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.81 | 58.0 | 5.46e-01 | 75.8% | 66.3% |
| 3702282 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.81 | 68.0 | 5.24e-01 | 92.4% | 44.1% |
| 3341807 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.79 | 60.0 | 5.06e-01 | 81.8% | 71.8% |
| 4026357 | 160.1.1.0 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0.79 | 66.0 | 4.93e-01 | 90.9% | 55.5% |
| 3188337 | 192.2.1.6 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_3 | 0.76 | 62.0 | 5.09e-01 | 92.4% | 85.6% |
| 3260684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 50.0 | 5.40e-01 | 72.7% | 94.5% |
| 3424523 | 604.5.1.7 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ALMT | 0.70 | 58.0 | 5.18e-01 | 92.4% | 89.5% |
| 5043711 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.69 | 47.0 | 3.82e-01 | 75.8% | 37.6% |
| 3352998 | 109.4.1.541 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4220 | 0.66 | 56.0 | 3.75e-01 | 95.5% | 34.7% |