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OP009286.1__UUV44911.1__RCSWAN_58__00058

Bact-Vir

OP009286.1__UUV44911.1__RCSWAN_58__00058

Identity

Accession:
OP009286 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-81
PDB
CATH (57)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 59.0 6.34e-01 76.5% 81.7%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 58.0 6.18e-01 75.3% 79.2%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.81 56.0 6.52e-01 76.5% 100.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 58.0 6.47e-01 80.2% 100.0%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 52.0 5.69e-01 79.0% 86.4%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.74 57.0 4.63e-01 81.5% 85.6%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.72 42.0 4.26e-01 70.4% 58.7%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 42.0 5.23e-01 70.4% 100.0%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.71 55.0 5.01e-01 80.2% 78.8%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.71 58.0 5.99e-01 87.7% 100.0%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.71 59.0 4.16e-01 88.9% 58.1%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.71 50.0 5.28e-01 74.1% 100.0%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 5.37e-01 74.1% 94.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.78e-01 79.0% 100.0%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.70 52.0 5.26e-01 76.5% 96.2%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.69 56.0 4.52e-01 86.4% 96.7%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 44.0 5.09e-01 70.4% 92.9%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 5.48e-01 75.3% 98.4%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 5.27e-01 75.3% 90.9%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 40.0 4.88e-01 70.4% 100.0%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 48.0 5.28e-01 75.3% 96.8%
4p4mA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.66 41.0 3.64e-01 70.4% 44.3%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.64 48.0 4.82e-01 80.2% 89.2%
3dlbB03 2.170.260.50 Mainly Beta › Beta Complex › paz domain › 0.64 46.0 4.50e-01 75.3% 98.9%
4ft4B01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.64 49.0 4.10e-01 85.2% 84.0%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.79e-01 75.3% 94.4%
2z84A00 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.62 48.0 3.61e-01 84.0% 43.3%
5egwA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 48.0 3.16e-01 84.0% 58.7%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.61 41.0 3.19e-01 85.2% 32.8%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.61 52.0 4.00e-01 98.8% 64.3%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 42.0 4.59e-01 74.1% 96.8%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.60 43.0 3.21e-01 76.5% 96.7%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.66e-01 79.0% 98.5%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.59 39.0 4.12e-01 79.0% 73.3%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 40.0 3.97e-01 77.8% 65.5%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 46.0 3.75e-01 86.4% 91.9%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 51.0 3.54e-01 97.5% 70.1%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.05e-01 80.2% 72.4%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.73e-01 82.7% 100.0%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.58 40.0 3.37e-01 70.4% 85.6%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.55e-01 81.5% 94.4%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 4.41e-01 77.8% 100.0%
6ei1A01 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.57 45.0 3.19e-01 86.4% 40.0%
3p26B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 42.0 3.90e-01 77.8% 67.3%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.56 36.0 3.47e-01 79.0% 56.4%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 4.35e-01 82.7% 95.9%
4pkfB00 4.10.490.20 Few Secondary Structures › Irregular › High-Potential Iron-Sulfur Protein; Chain A › 0.56 40.0 4.22e-01 96.3% 88.4%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 39.0 3.92e-01 75.3% 73.5%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 46.0 3.04e-01 95.1% 60.4%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.82e-01 96.3% 100.0%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.53 38.0 2.80e-01 75.3% 80.7%
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.53 39.0 3.12e-01 79.0% 50.3%
4jivD00 2.60.200.60 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.53 38.0 3.69e-01 77.8% 93.5%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 39.0 3.67e-01 80.2% 80.4%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 35.0 3.38e-01 70.4% 90.7%
2bm0A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 38.0 3.53e-01 77.8% 64.1%
5h7jA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 36.0 3.33e-01 74.1% 57.4%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 56.0 6.04e-01 79.0% 78.6%
4974669 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.83 56.0 5.43e-01 76.5% 63.3%
5017637 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.82 54.0 6.54e-01 75.3% 100.0%
3607981 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 59.0 6.13e-01 75.3% 93.2%
4029199 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 63.0 3.54e-01 82.7% 10.0%
3277860 4.1.1.368 beta barrels › SH3 › SH3 › SH3 › DUF3097_N 0.77 51.0 5.60e-01 75.3% 84.6%
3959531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 56.0 6.03e-01 77.8% 90.0%
3510024 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.76 56.0 5.03e-01 77.8% 84.5%
3886139 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 55.0 6.13e-01 76.5% 96.9%
5017073 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.75 58.0 4.64e-01 82.7% 44.0%
3824699 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 55.0 5.99e-01 76.5% 96.9%
None 0.74 56.0 4.33e-01 79.0% 62.4%
3360171 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.74 56.0 4.62e-01 79.0% 58.0%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.74 58.0 5.00e-01 82.7% 100.0%
3670066 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.74 56.0 4.43e-01 79.0% 54.2%
3583597 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 51.0 4.97e-01 79.0% 66.7%
4003702 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.72 57.0 4.30e-01 85.2% 87.2%
5048696 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 51.0 3.99e-01 79.0% 35.3%
3593976 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 56.0 4.69e-01 81.5% 62.3%
3575867 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.72 57.0 4.76e-01 85.2% 95.7%
3954938 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 52.0 5.73e-01 76.5% 95.4%
3836457 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.72 56.0 4.52e-01 82.7% 92.0%
4028885 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 51.0 5.67e-01 76.5% 93.8%
3330137 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.71 56.0 4.46e-01 84.0% 94.4%
3349135 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.56e-01 86.4% 97.8%
3889197 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.71 55.0 4.32e-01 82.7% 72.4%
3265170 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 50.0 5.54e-01 75.3% 92.3%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 52.0 5.76e-01 80.2% 96.9%
3608236 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 51.0 5.61e-01 75.3% 93.8%
3683487 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.71 57.0 4.42e-01 86.4% 94.9%
4932514 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.71 54.0 4.74e-01 81.5% 71.7%
3828371 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.71 52.0 5.17e-01 77.8% 82.4%
4957377 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.71 45.0 4.97e-01 75.3% 82.5%
3313137 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.71 55.0 4.40e-01 84.0% 93.1%
3974490 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 49.0 4.93e-01 71.6% 78.8%
3923766 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 53.0 4.68e-01 79.0% 80.0%
3992087 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.70 57.0 4.47e-01 88.9% 80.6%
3546727 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 59.0 5.33e-01 92.6% 88.0%
3824811 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.69 56.0 4.52e-01 87.7% 99.4%
3686225 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 53.0 4.03e-01 81.5% 81.1%
3638086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 4.22e-01 85.2% 91.7%
3433070 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 45.0 4.77e-01 76.5% 78.3%
3373298 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 51.0 3.61e-01 79.0% 67.1%
3795384 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 3.80e-01 81.5% 41.4%
3629316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 52.0 4.85e-01 81.5% 89.0%
3806777 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 50.0 5.18e-01 79.0% 97.3%
3870945 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 4.12e-01 90.1% 82.0%
3238955 4.1.1.377 beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like 0.66 49.0 4.95e-01 77.8% 81.2%
5034832 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.94e-01 74.1% 98.6%
3550047 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.66 55.0 4.28e-01 90.1% 82.4%
5080798 4.17.1.0 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like 0.65 50.0 5.17e-01 82.7% 100.0%
3495447 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.64 57.0 4.97e-01 97.5% 100.0%
4025294 4.1.1.60 beta barrels › SH3 › SH3 › SH3 › YccV-like 0.64 57.0 5.48e-01 95.1% 100.0%
3995290 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.63 48.0 4.39e-01 82.7% 94.5%
3629455 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.63 49.0 3.78e-01 85.2% 62.6%
3495148 219.1.1.41 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 0.63 47.0 3.77e-01 80.2% 53.3%
3536187 219.1.1.41 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 0.60 48.0 4.05e-01 87.7% 65.7%
4051625 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 42.0 4.55e-01 74.1% 93.8%
4146937 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 44.0 4.74e-01 79.0% 98.5%
4948178 4.1.1.484 beta barrels › SH3 › SH3 › SH3 › Lsm_C 0.59 43.0 4.53e-01 77.8% 98.6%
4201878 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 43.0 4.59e-01 79.0% 98.5%
4263415 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.58 40.0 3.87e-01 77.8% 63.3%
4019995 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.58 43.0 3.95e-01 81.5% 86.4%
2141114 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.57 41.0 4.33e-01 79.0% 93.1%
4991129 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 40.0 4.00e-01 81.5% 71.4%
3994778 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 41.0 3.50e-01 79.0% 75.5%
4026033 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.55 39.0 3.53e-01 79.0% 54.5%
3460634 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.54 41.0 3.47e-01 81.5% 83.6%
4960615 5.1.3.277 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7133 0.54 46.0 3.06e-01 95.1% 63.6%
3911065 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 43.0 4.39e-01 92.6% 97.5%
3257390 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 44.0 3.02e-01 95.1% 47.4%
5056878 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.52 44.0 2.95e-01 95.1% 68.8%
4258307 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 46.0 3.16e-01 100.0% 37.1%
3245395 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 43.0 2.88e-01 95.1% 93.1%
5083758 12.6.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M 0.51 29.0 2.99e-01 75.3% 57.3%
3928760 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 45.0 2.96e-01 100.0% 27.5%