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OP009286.1__UUV44914.1__RCSWAN_61__00061

Bact-Vir

OP009286.1__UUV44914.1__RCSWAN_61__00061

Identity

Accession:
OP009286 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhodobacter_phage_RcSwan

TaxID: 2970528

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-109
PDB
Domain cluster: rep: LSDeep1_scaffold_41_prodigal-single.1__X__X__00031__D11-103
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12637.15 best TSCPD 24.2 4.90e-05 92.9% 78.1%
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8p2aA01 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.70 56.0 5.89e-01 98.0% 97.7%
2e5aA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.67 51.0 5.25e-01 94.9% 84.9%
1su0B00 3.90.1010.10 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.65 57.0 5.14e-01 98.0% 82.4%
3a7rA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.64 51.0 5.33e-01 95.9% 95.5%
2e1qC05 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.62 56.0 5.30e-01 100.0% 96.6%
1vqzA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.62 49.0 5.15e-01 92.9% 95.5%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 37.0 4.40e-01 73.5% 100.0%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 31.0 3.21e-01 94.9% 53.7%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 38.0 2.96e-01 100.0% 30.4%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 49.0 4.54e-01 100.0% 86.6%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.55 47.0 3.58e-01 95.9% 57.7%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.54 36.0 3.08e-01 84.7% 40.0%
1yeyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 47.0 4.40e-01 100.0% 91.1%
7qi3A01 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.53 45.0 3.20e-01 94.9% 38.2%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 39.0 3.37e-01 77.6% 88.4%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.52 45.0 4.09e-01 99.0% 97.9%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 44.0 3.52e-01 100.0% 90.2%
4iglB00 2.180.10.10 Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core 0.50 44.0 2.72e-01 100.0% 16.1%
5uaiA01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.50 36.0 2.86e-01 74.5% 97.1%
4e6nB00 3.30.1610.20 Alpha Beta › 2-Layer Sandwich › c-terminal autoproteolytic domain of nucleoporin nup98 › Hen1, N-terminal domain 0.50 38.0 3.00e-01 81.6% 80.7%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.50 39.0 3.63e-01 92.9% 64.8%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5040105 244.3.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › TSCPD 0.78 72.0 6.90e-01 98.0% 91.8%
5042137 244.3.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › TSCPD 0.78 73.0 6.75e-01 100.0% 85.0%
4963032 244.2.1.15 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › TSCPD 0.78 72.0 6.95e-01 100.0% 93.6%
5030209 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.77 71.0 6.33e-01 100.0% 91.9%
4265925 3518.1.2.0 ↗ a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex 0.76 59.0 5.04e-01 100.0% 53.0%
3967619 244.3.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › TSCPD 0.74 67.0 6.28e-01 99.0% 93.3%
3261978 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.68 43.0 5.01e-01 84.7% 95.4%
3959049 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.66 59.0 5.16e-01 100.0% 80.7%
3724970 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.65 47.0 4.58e-01 84.7% 68.2%
4971175 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.64 57.0 5.59e-01 100.0% 91.4%
4144910 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.63 50.0 5.28e-01 92.9% 97.6%
4987923 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.63 56.0 5.48e-01 100.0% 91.4%
4933772 244.3.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU 0.63 56.0 5.03e-01 100.0% 71.1%
4054004 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.63 50.0 5.28e-01 95.9% 97.7%
3781393 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.62 42.0 4.45e-01 85.7% 79.8%
2041877 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.62 49.0 5.12e-01 92.9% 94.3%
6736 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.62 49.0 5.15e-01 92.9% 95.5%
4486450 244.3.1.4 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C 0.61 47.0 4.98e-01 90.8% 95.3%
3264731 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.59 42.0 3.85e-01 83.7% 56.9%
4443623 2484.1.1.21 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.53 46.0 3.39e-01 100.0% 95.4%
4191047 2484.1.1.245 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA, PilM_2, FtsA 0.52 46.0 3.13e-01 100.0% 96.9%