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OP028995.1__UUJ74478.1__X__00001
Bact-VirOP028995.1__UUJ74478.1__X__00001
Identity
- Accession:
- OP028995 ↗
- Kingdom:
- phage
Quality
84.9
mean pLDDT
Taxonomy
TaxID: 2969983
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-69
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.87 | 64.0 | 5.52e-01 | 80.7% | 51.8% |
| 8d8lN01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.85 | 56.0 | 4.75e-01 | 71.9% | 45.3% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.83 | 57.0 | 3.71e-01 | 71.9% | 54.0% |
| 3nfqB02 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.80 | 54.0 | 4.25e-01 | 70.2% | 71.3% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.79 | 54.0 | 3.63e-01 | 71.9% | 43.3% |
| 1hu3A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.79 | 57.0 | 3.86e-01 | 84.2% | 21.6% |
| 7ep1B01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.78 | 51.0 | 3.26e-01 | 75.4% | 15.7% |
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.78 | 69.0 | 5.39e-01 | 96.5% | 88.7% |
| 1di1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.77 | 59.0 | 3.70e-01 | 86.0% | 16.2% |
| 4xriA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.76 | 57.0 | 3.11e-01 | 80.7% | 5.2% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 51.0 | 4.27e-01 | 71.9% | 42.9% |
| 3vhlA02 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.76 | 59.0 | 4.62e-01 | 87.7% | 40.0% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.76 | 60.0 | 4.76e-01 | 87.7% | 43.7% |
| 1cmjA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.75 | 57.0 | 3.36e-01 | 78.9% | 16.8% |
| 1gwiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.74 | 56.0 | 3.27e-01 | 78.9% | 16.4% |
| 3rk6A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.74 | 48.0 | 3.20e-01 | 70.2% | 17.5% |
| 2vsoF01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.73 | 60.0 | 3.93e-01 | 89.5% | 39.8% |
| 3ea5D00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.73 | 58.0 | 3.17e-01 | 84.2% | 9.5% |
| 3h95A01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.73 | 50.0 | 3.78e-01 | 71.9% | 92.4% |
| 4i2zA02 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.71 | 60.0 | 3.59e-01 | 91.2% | 26.9% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 56.0 | 5.20e-01 | 87.7% | 77.8% |
| 3llkA01 | 1.20.120.1960 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain | 0.69 | 48.0 | 4.03e-01 | 73.7% | 54.1% |
| 4hojA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 59.0 | 4.87e-01 | 96.5% | 83.5% |
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.68 | 55.0 | 4.06e-01 | 86.0% | 59.9% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.68 | 51.0 | 3.48e-01 | 80.7% | 39.0% |
| 1f2eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 55.0 | 4.59e-01 | 96.5% | 84.0% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 55.0 | 4.49e-01 | 93.0% | 83.0% |
| 4c0eA01 | 1.25.40.790 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.64 | 54.0 | 3.41e-01 | 93.0% | 39.9% |
| 3i7aA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 53.0 | 3.41e-01 | 94.7% | 35.8% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.61 | 51.0 | 3.98e-01 | 96.5% | 41.7% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 40.0 | 4.06e-01 | 78.9% | 82.1% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3371000 | 109.4.1.555 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Xpo1,Exportin-5 | 0.97 | 74.0 | 3.89e-01 | 78.9% | 3.8% |
| 4682501 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.91 | 76.0 | 6.09e-01 | 87.7% | 50.0% |
| 4129436 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.89 | 73.0 | 5.87e-01 | 87.7% | 48.6% |
| 4232718 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.88 | 72.0 | 5.88e-01 | 87.7% | 50.0% |
| 3684830 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.88 | 72.0 | 5.88e-01 | 87.7% | 51.0% |
| 4293733 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.88 | 72.0 | 5.76e-01 | 87.7% | 47.6% |
| 3225544 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.87 | 71.0 | 5.78e-01 | 87.7% | 50.0% |
| 3364607 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.84 | 66.0 | 5.70e-01 | 86.0% | 56.5% |
| 3498099 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.83 | 60.0 | 3.60e-01 | 78.9% | 12.5% |
| 4100012 | 327.13.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › SpoIIIAH | 0.82 | 72.0 | 5.54e-01 | 96.5% | 45.8% |
| 4634395 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.81 | 66.0 | 5.32e-01 | 87.7% | 47.6% |
| 3414083 | 109.4.1.371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTP1_C1 | 0.81 | 60.0 | 3.52e-01 | 80.7% | 11.3% |
| 3620630 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.80 | 53.0 | 4.91e-01 | 71.9% | 55.7% |
| 4376902 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.80 | 53.0 | 4.39e-01 | 71.9% | 41.5% |
| 4569984 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.79 | 64.0 | 3.78e-01 | 87.7% | 81.1% |
| 3636022 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.79 | 60.0 | 3.47e-01 | 78.9% | 16.4% |
| 4959975 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.79 | 63.0 | 5.76e-01 | 93.0% | 66.7% |
| 3269316 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.79 | 52.0 | 4.35e-01 | 70.2% | 41.1% |
| 4029016 | 109.4.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 | 0.78 | 63.0 | 4.03e-01 | 87.7% | 19.2% |
| 4928483 | 101.1.3.36 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_23 | 0.77 | 61.0 | 4.99e-01 | 87.7% | 47.6% |
| 3880244 | 603.2.1.24 ↗ | alpha bundles › STAT-like › STAT › STAT › TBCA_PH | 0.77 | 61.0 | 4.47e-01 | 87.7% | 32.3% |
| 3631582 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.77 | 60.0 | 5.03e-01 | 87.7% | 50.0% |
| 4027114 | 3331.1.1.8 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › RRP36 | 0.76 | 57.0 | 4.32e-01 | 84.2% | 34.1% |
| 3381605 | 109.4.1.146 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load | 0.76 | 61.0 | 3.42e-01 | 87.7% | 7.2% |
| 52577 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.76 | 57.0 | 3.37e-01 | 78.9% | 16.8% |
| 3925476 | 109.4.1.1134 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_INTS8_3 | 0.76 | 58.0 | 3.40e-01 | 80.7% | 16.3% |
| 3902239 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.76 | 51.0 | 3.54e-01 | 70.2% | 74.9% |
| 2028819 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.75 | 57.0 | 4.40e-01 | 78.9% | 50.4% |
| 5082352 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.74 | 50.0 | 3.70e-01 | 73.7% | 27.6% |
| 3278856 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.73 | 52.0 | 5.44e-01 | 75.4% | 86.0% |
| 3438255 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.72 | 56.0 | 5.21e-01 | 87.7% | 69.3% |
| 3965811 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.72 | 53.0 | 4.18e-01 | 77.2% | 55.0% |
| 3613648 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.71 | 53.0 | 4.17e-01 | 80.7% | 60.8% |
| 3907756 | 109.4.1.365 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTTN_N | 0.71 | 64.0 | 3.32e-01 | 96.5% | 8.2% |
| 3894562 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.69 | 54.0 | 4.22e-01 | 82.5% | 72.7% |
| 4636643 | 148.1.3.209 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › GrpE | 0.67 | 48.0 | 4.02e-01 | 80.7% | 44.0% |
| 3402630 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 51.0 | 3.82e-01 | 86.0% | 70.7% |
| 3935467 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.65 | 52.0 | 4.19e-01 | 86.0% | 56.0% |
| 3833828 | 109.4.1.83 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf | 0.65 | 50.0 | 2.93e-01 | 84.2% | 9.1% |
| 3564487 | 109.4.1.1413 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28415 | 0.64 | 53.0 | 3.26e-01 | 89.5% | 28.3% |
| 4663650 | 605.1.1.108 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE | 0.63 | 47.0 | 4.84e-01 | 86.0% | 85.5% |
| 4378877 | 3711.1.1.20 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444 | 0.61 | 46.0 | 4.31e-01 | 84.2% | 70.7% |
| 3813020 | 109.4.1.546 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ecm29 | 0.58 | 44.0 | 2.78e-01 | 84.2% | 29.5% |
| 4121580 | 194.1.1.1 ↗ | alpha complex topology › Serum albumin-like › Serum albumin-like › Serum albumin-like › Serum_albumin | 0.58 | 42.0 | 2.92e-01 | 80.7% | 22.0% |