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OP028995.1__UUJ74490.1__X__00013
Bact-VirOP028995.1__UUJ74490.1__X__00013
Identity
- Accession:
- OP028995 ↗
- Kingdom:
- phage
Quality
67.2
mean pLDDT
Taxonomy
TaxID: 2969983
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-59
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1doqA00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.83 | 73.0 | 6.61e-01 | 100.0% | 73.9% |
| 1y88A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.79 | 70.0 | 6.66e-01 | 100.0% | 84.7% |
| 2zxiA04 | 1.10.150.570 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GidA associated domain, C-terminal subdomain | 0.74 | 57.0 | 5.69e-01 | 100.0% | 83.0% |
| 2zj8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.73 | 62.0 | 6.01e-01 | 100.0% | 91.2% |
| 2i1qA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.72 | 61.0 | 5.81e-01 | 98.0% | 82.3% |
| 2kg5A01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.71 | 58.0 | 5.56e-01 | 100.0% | 84.4% |
| 4is7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.70 | 57.0 | 5.29e-01 | 100.0% | 75.0% |
| 2q0zX02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.70 | 60.0 | 5.76e-01 | 100.0% | 84.5% |
| 5zrxA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.69 | 57.0 | 5.52e-01 | 100.0% | 91.5% |
| 2blfB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.68 | 53.0 | 5.01e-01 | 88.2% | 95.2% |
| 6qwvH02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.67 | 55.0 | 5.34e-01 | 98.0% | 94.8% |
| 1dgsA05 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.65 | 53.0 | 4.96e-01 | 100.0% | 89.9% |
| 1gkuB08 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.64 | 52.0 | 4.17e-01 | 100.0% | 93.3% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 45.0 | 3.34e-01 | 90.2% | 87.2% |
| 3bhwA00 | 1.10.3540.10 | Mainly Alpha › Orthogonal Bundle › fold of a uncharacterized protein from magnetospirillum magneticum › uncharacterized protein from magnetospirillum magneticum domain | 0.55 | 40.0 | 2.88e-01 | 82.4% | 68.1% |
| 6n8eA04 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 37.0 | 2.49e-01 | 86.3% | 16.9% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.51 | 39.0 | 2.97e-01 | 88.2% | 60.1% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4228076 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.94 | 88.0 | 7.98e-01 | 100.0% | 78.5% |
| 4538575 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.94 | 88.0 | 6.92e-01 | 100.0% | 53.7% |
| 4285151 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.94 | 87.0 | 7.91e-01 | 100.0% | 78.5% |
| 4474556 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.93 | 86.0 | 8.12e-01 | 100.0% | 85.0% |
| 4165308 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.93 | 85.0 | 8.05e-01 | 100.0% | 85.0% |
| 1292856 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.93 | 85.0 | 7.19e-01 | 100.0% | 63.7% |
| 4559902 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.92 | 84.0 | 7.51e-01 | 100.0% | 72.9% |
| 4497953 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.91 | 83.0 | 7.02e-01 | 100.0% | 63.7% |
| 4255937 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.90 | 82.0 | 6.69e-01 | 100.0% | 56.7% |
| 4201496 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.90 | 81.0 | 7.09e-01 | 100.0% | 68.0% |
| 4546157 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.89 | 80.0 | 6.95e-01 | 100.0% | 68.0% |
| 4082618 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.86 | 78.0 | 6.82e-01 | 100.0% | 68.0% |
| 4340260 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.86 | 76.0 | 7.12e-01 | 100.0% | 81.0% |
| 3554607 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.84 | 75.0 | 6.44e-01 | 100.0% | 67.5% |
| 4403062 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 75.0 | 6.78e-01 | 100.0% | 72.9% |
| 3869571 | 102.1.1.179 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_XRCC3_RpoA | 0.84 | 75.0 | 6.75e-01 | 100.0% | 72.9% |
| 4345341 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.84 | 73.0 | 6.35e-01 | 100.0% | 63.7% |
| 3929386 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 74.0 | 6.66e-01 | 100.0% | 77.1% |
| 3410797 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.83 | 74.0 | 7.01e-01 | 100.0% | 90.0% |
| 3283042 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.81 | 71.0 | 6.78e-01 | 100.0% | 85.0% |
| 3487665 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.79 | 71.0 | 6.72e-01 | 100.0% | 85.0% |
| 5056035 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.79 | 69.0 | 6.62e-01 | 100.0% | 91.7% |
| 2951 | 102.1.1.52 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › AF1548-like_C | 0.79 | 70.0 | 6.66e-01 | 100.0% | 84.7% |
| 4928721 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 68.0 | 6.16e-01 | 100.0% | 74.3% |
| 5061478 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.77 | 65.0 | 6.00e-01 | 100.0% | 74.3% |
| 4946451 | 102.1.1.182 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 | 0.77 | 66.0 | 5.99e-01 | 100.0% | 85.7% |
| 3809782 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 65.0 | 5.97e-01 | 100.0% | 84.3% |
| 3290867 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.75 | 64.0 | 6.17e-01 | 100.0% | 98.3% |
| 4989822 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 61.0 | 6.02e-01 | 96.1% | 87.3% |
| 4672295 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 64.0 | 5.51e-01 | 100.0% | 64.7% |
| 4965166 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.74 | 66.0 | 6.25e-01 | 100.0% | 85.0% |
| 4149240 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 65.0 | 5.88e-01 | 100.0% | 74.3% |
| 3003 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.74 | 62.0 | 5.56e-01 | 100.0% | 69.2% |
| 4031699 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 61.0 | 6.07e-01 | 100.0% | 90.9% |
| 3907308 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.74 | 62.0 | 5.61e-01 | 100.0% | 72.0% |
| 3755450 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.74 | 63.0 | 5.88e-01 | 100.0% | 83.1% |
| 3570848 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.74 | 62.0 | 5.59e-01 | 100.0% | 72.0% |
| 5035437 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 65.0 | 6.45e-01 | 100.0% | 92.6% |
| 4995116 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 63.0 | 6.23e-01 | 100.0% | 94.5% |
| 5061085 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 62.0 | 5.94e-01 | 100.0% | 91.7% |
| 5039718 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.72 | 60.0 | 5.94e-01 | 100.0% | 89.1% |
| 3919158 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 61.0 | 5.85e-01 | 100.0% | 93.3% |
| 3895315 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.71 | 60.0 | 5.11e-01 | 100.0% | 62.2% |
| 3791428 | 102.1.1.77 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › TNK-like_SAM | 0.71 | 59.0 | 5.56e-01 | 98.0% | 83.1% |
| 5059290 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.71 | 60.0 | 5.97e-01 | 100.0% | 94.5% |
| 3541981 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.70 | 56.0 | 5.23e-01 | 96.1% | 74.3% |
| 4470895 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.69 | 56.0 | 5.58e-01 | 100.0% | 94.5% |
| 3945915 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 59.0 | 5.07e-01 | 100.0% | 61.2% |
| 3717703 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 60.0 | 5.70e-01 | 100.0% | 83.3% |
| 3617542 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.69 | 58.0 | 5.58e-01 | 100.0% | 81.7% |
| 3174667 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.69 | 60.0 | 5.73e-01 | 100.0% | 93.3% |
| 3865559 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.68 | 58.0 | 5.56e-01 | 100.0% | 86.7% |
| 4973256 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.68 | 53.0 | 5.24e-01 | 90.2% | 92.7% |
| 4975251 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.68 | 60.0 | 5.70e-01 | 100.0% | 86.7% |
| 3551495 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 57.0 | 5.48e-01 | 100.0% | 86.7% |
| 4024493 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.67 | 56.0 | 5.52e-01 | 100.0% | 98.2% |
| 3389838 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 57.0 | 5.12e-01 | 100.0% | 74.7% |
| 3846966 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.67 | 58.0 | 5.54e-01 | 100.0% | 90.0% |
| 365854 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.67 | 57.0 | 5.38e-01 | 100.0% | 80.3% |
| 4981272 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.66 | 51.0 | 5.10e-01 | 92.2% | 90.9% |
| 3711673 | 4299.1.1.1 ↗ | alpha arrays › BSD domain › BSD domain › BSD domain › BSD | 0.59 | 47.0 | 3.59e-01 | 94.1% | 70.0% |
| 3584092 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.58 | 45.0 | 3.61e-01 | 86.3% | 76.2% |
| 3403491 | 101.1.1.229 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Tri-helical_Ada2b_C | 0.57 | 42.0 | 4.21e-01 | 84.3% | 94.5% |
| 3619869 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.56 | 45.0 | 3.55e-01 | 94.1% | 69.2% |
| 5003619 | 4973.1.1.0 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core | 0.53 | 39.0 | 3.76e-01 | 86.3% | 72.3% |
D2
medium
residues 60-133