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OP028995.1__UUJ74491.1__X__00014
Bact-VirOP028995.1__UUJ74491.1__X__00014
Identity
- Accession:
- OP028995 ↗
- Kingdom:
- phage
Quality
87.5
mean pLDDT
Taxonomy
TaxID: 2969983
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 175-335
Domain cluster:
rep: CAKLQF020000001.1__CAH1070266.1__SAMEA5780031_00360__00352__D220-408
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00589.28 best | Phage_integrase | 34.5 | 2.50e-08 | 95.0% | 81.4% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1aihA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.85 | 73.0 | 7.14e-01 | 100.0% | 84.1% |
| 4a8eA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.82 | 73.0 | 6.98e-01 | 93.2% | 82.1% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.82 | 78.0 | 6.90e-01 | 100.0% | 88.7% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.81 | 76.0 | 7.45e-01 | 100.0% | 98.8% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.80 | 76.0 | 6.81e-01 | 99.4% | 93.4% |
| 1ae9A00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.76 | 66.0 | 6.51e-01 | 91.9% | 90.1% |
| 1a31A03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.71 | 50.0 | 5.21e-01 | 71.4% | 86.7% |
| 2v6eA03 | 1.10.443.30 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase | 0.67 | 61.0 | 5.49e-01 | 100.0% | 88.0% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 25.0 | 4.20e-01 | 76.4% | 100.0% |
| 2lhiA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 37.0 | 3.65e-01 | 76.4% | 69.3% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4637388 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 76.0 | 7.49e-01 | 100.0% | 87.6% |
| 4183457 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 73.0 | 7.71e-01 | 95.7% | 97.9% |
| 4181053 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.85 | 81.0 | 7.42e-01 | 100.0% | 88.0% |
| 4007744 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 81.0 | 7.34e-01 | 100.0% | 94.6% |
| 5032561 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 53.0 | 6.53e-01 | 72.7% | 97.1% |
| 4392937 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.84 | 74.0 | 7.56e-01 | 98.1% | 94.8% |
| 4994277 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 80.0 | 7.67e-01 | 100.0% | 88.9% |
| 4965169 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.84 | 79.0 | 7.10e-01 | 98.8% | 94.3% |
| 4973226 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 59.0 | 6.76e-01 | 77.6% | 96.7% |
| 4960057 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 59.0 | 6.37e-01 | 73.3% | 92.1% |
| 3589779 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 61.0 | 6.31e-01 | 75.2% | 96.7% |
| 4380833 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 74.0 | 7.41e-01 | 100.0% | 92.7% |
| 4004483 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 78.0 | 7.28e-01 | 99.4% | 88.9% |
| 4680466 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.82 | 54.0 | 6.25e-01 | 74.5% | 89.2% |
| 5010452 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 54.0 | 6.50e-01 | 73.3% | 97.3% |
| 4965845 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 77.0 | 7.27e-01 | 100.0% | 93.2% |
| 5059725 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 77.0 | 7.40e-01 | 100.0% | 88.3% |
| 3588110 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 59.0 | 6.29e-01 | 73.3% | 98.6% |
| 5083506 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 77.0 | 7.34e-01 | 100.0% | 92.4% |
| 4410774 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.81 | 52.0 | 6.16e-01 | 73.3% | 90.4% |
| 3586881 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 60.0 | 6.23e-01 | 75.2% | 97.3% |
| 3954716 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 60.0 | 6.43e-01 | 75.2% | 97.9% |
| 4200953 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 60.0 | 6.17e-01 | 75.8% | 93.5% |
| 3964171 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 76.0 | 7.44e-01 | 100.0% | 92.0% |
| 5037644 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 55.0 | 6.31e-01 | 73.9% | 91.7% |
| 3588206 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 60.0 | 6.23e-01 | 75.8% | 94.0% |
| 4936284 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 55.0 | 6.40e-01 | 74.5% | 95.7% |
| 5076857 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 75.0 | 7.26e-01 | 100.0% | 89.1% |
| 5016957 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 75.0 | 7.32e-01 | 98.1% | 98.3% |
| 4952765 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 60.0 | 6.41e-01 | 75.8% | 92.1% |
| 4992939 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 70.0 | 6.88e-01 | 93.8% | 85.9% |
| 4930303 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 54.0 | 6.39e-01 | 75.2% | 95.7% |
| 3946063 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 73.0 | 6.75e-01 | 94.4% | 81.0% |
| 4928138 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.80 | 75.0 | 6.93e-01 | 98.8% | 99.0% |
| 4998701 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 76.0 | 7.31e-01 | 99.4% | 93.3% |
| 4137254 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 59.0 | 6.01e-01 | 74.5% | 95.5% |
| 4313957 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 59.0 | 6.42e-01 | 75.2% | 98.5% |
| 5083074 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 58.0 | 6.05e-01 | 73.9% | 92.7% |
| 3587374 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 59.0 | 5.91e-01 | 75.8% | 96.4% |
| 4044870 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 59.0 | 6.40e-01 | 75.2% | 91.9% |
| 5000880 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 76.0 | 7.25e-01 | 99.4% | 88.9% |
| 4980638 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 63.0 | 6.61e-01 | 82.0% | 96.7% |
| 4962932 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 58.0 | 5.83e-01 | 75.2% | 97.0% |
| 4954527 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 72.0 | 6.36e-01 | 94.4% | 80.0% |
| 3969558 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.79 | 58.0 | 6.34e-01 | 75.2% | 91.1% |
| 3942448 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 58.0 | 6.03e-01 | 75.2% | 98.7% |
| 4981577 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 56.0 | 6.35e-01 | 75.2% | 93.6% |
| 5058518 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 71.0 | 6.59e-01 | 94.4% | 85.1% |
| 4969226 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 59.0 | 6.41e-01 | 76.4% | 97.8% |
| 4964778 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 56.0 | 5.56e-01 | 73.3% | 96.5% |
| 3979114 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 61.0 | 6.71e-01 | 80.7% | 98.5% |
| 4007467 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 75.0 | 6.62e-01 | 100.0% | 93.2% |
| 5028332 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 56.0 | 6.33e-01 | 75.2% | 93.6% |
| 4134015 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 56.0 | 5.79e-01 | 73.3% | 98.1% |
| 4580960 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 57.0 | 6.09e-01 | 73.9% | 92.1% |
| 5052502 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 58.0 | 6.28e-01 | 75.2% | 94.8% |
| 4285602 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 57.0 | 6.30e-01 | 74.5% | 91.5% |
| 4120466 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 57.0 | 6.23e-01 | 74.5% | 92.6% |
| 4278298 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 57.0 | 6.27e-01 | 75.2% | 92.6% |
| 4192665 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 56.0 | 6.44e-01 | 73.9% | 97.5% |
| 4966027 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 74.0 | 7.04e-01 | 100.0% | 88.6% |
| 3943153 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 56.0 | 6.17e-01 | 72.7% | 95.4% |
| 5016981 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 56.0 | 6.39e-01 | 75.8% | 97.5% |
| 4522024 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 56.0 | 5.87e-01 | 73.9% | 96.0% |
| 4966032 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.78 | 56.0 | 6.07e-01 | 72.7% | 96.3% |
| 5027341 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 70.0 | 7.06e-01 | 95.7% | 94.4% |
| 5008464 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 74.0 | 7.00e-01 | 100.0% | 90.8% |
| 4153666 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 58.0 | 6.28e-01 | 75.8% | 92.6% |
| 4964783 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.78 | 57.0 | 5.59e-01 | 74.5% | 97.6% |
| 4042318 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 56.0 | 6.08e-01 | 73.3% | 93.3% |
| 4028841 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 56.0 | 6.14e-01 | 73.9% | 94.1% |
| 5052541 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 57.0 | 6.44e-01 | 75.8% | 96.8% |
| 4071300 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 57.0 | 6.20e-01 | 75.2% | 99.3% |
| 3964657 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 72.0 | 6.76e-01 | 100.0% | 89.2% |
| 1267972 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 56.0 | 5.75e-01 | 74.5% | 98.1% |
| 3945675 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 57.0 | 6.08e-01 | 75.2% | 96.4% |
| 4996190 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 56.0 | 6.34e-01 | 75.2% | 98.4% |
| 5029991 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 55.0 | 6.18e-01 | 75.2% | 94.4% |
| 4975762 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.77 | 55.0 | 6.16e-01 | 73.9% | 93.6% |
| 3599060 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.76 | 68.0 | 6.27e-01 | 93.8% | 89.5% |
| 4034079 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.76 | 55.0 | 5.98e-01 | 73.3% | 94.1% |
| 5035582 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.76 | 52.0 | 6.13e-01 | 74.5% | 97.4% |
| 3886079 | 101.1.8.2 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Topoisom_I | 0.76 | 67.0 | 6.15e-01 | 93.8% | 89.8% |
| 4182686 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.76 | 71.0 | 6.63e-01 | 100.0% | 91.3% |
| 3978568 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.76 | 55.0 | 5.97e-01 | 74.5% | 95.6% |
| 3587645 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.75 | 56.0 | 6.10e-01 | 76.4% | 100.0% |
| 5011490 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.75 | 55.0 | 5.73e-01 | 75.8% | 94.0% |
| 5052945 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.66 | 26.0 | 2.68e-01 | 100.0% | 37.4% |
D2
medium
residues 14-72
Domain cluster:
rep: NC_003085.1__NP_203425.1__Mx8p12__00012__D43-95
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.75 | 48.0 | 3.85e-01 | 76.3% | 35.2% |
| 4fxdA05 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.73 | 59.0 | 4.67e-01 | 88.1% | 56.4% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.69 | 52.0 | 3.99e-01 | 81.4% | 92.0% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 47.0 | 3.82e-01 | 71.2% | 64.9% |
| 4jn7A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.65 | 50.0 | 4.13e-01 | 100.0% | 44.5% |
| 2jjdF02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.64 | 45.0 | 2.95e-01 | 74.6% | 45.8% |
| 3n0aA02 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 47.0 | 3.62e-01 | 78.0% | 80.7% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.63 | 49.0 | 3.65e-01 | 96.6% | 31.5% |
| 5ek8A01 | 2.60.40.3330 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 43.0 | 3.47e-01 | 74.6% | 77.0% |
| 3go2A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 47.0 | 3.90e-01 | 100.0% | 46.5% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.60 | 49.0 | 3.72e-01 | 98.3% | 47.6% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 44.0 | 3.37e-01 | 81.4% | 73.8% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 52.0 | 4.37e-01 | 100.0% | 79.8% |
| 1vwxP00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.59 | 41.0 | 3.05e-01 | 72.9% | 65.4% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 47.0 | 3.18e-01 | 100.0% | 89.1% |
| 2jzlA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 46.0 | 3.84e-01 | 91.5% | 87.4% |
| 3pieB05 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 37.0 | 3.69e-01 | 83.1% | 60.9% |
| 2l2fA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 45.0 | 3.78e-01 | 88.1% | 87.0% |
| 2y1sA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 47.0 | 3.94e-01 | 93.2% | 83.3% |
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 46.0 | 2.93e-01 | 89.8% | 90.3% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.57 | 44.0 | 3.44e-01 | 86.4% | 51.1% |
| 1n7vA01 | 2.105.10.10 | Mainly Beta › 3 Propeller › Pseudo beta propeller › Pseudo beta propeller | 0.57 | 45.0 | 3.26e-01 | 88.1% | 30.5% |
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.57 | 48.0 | 3.37e-01 | 94.9% | 64.5% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 48.0 | 4.06e-01 | 100.0% | 66.1% |
| 3dorA03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 47.0 | 3.12e-01 | 91.5% | 100.0% |
| 1wuoA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 47.0 | 3.31e-01 | 96.6% | 48.4% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 45.0 | 3.51e-01 | 88.1% | 87.5% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 38.0 | 2.59e-01 | 74.6% | 19.7% |
| 3cjlA00 | 3.10.20.850 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 | 0.56 | 39.0 | 3.40e-01 | 72.9% | 70.5% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 46.0 | 4.08e-01 | 100.0% | 91.8% |
| 1dt9A01 | 3.30.960.10 | Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 | 0.56 | 41.0 | 3.47e-01 | 81.4% | 94.3% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 47.0 | 3.64e-01 | 100.0% | 72.5% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 47.0 | 4.04e-01 | 100.0% | 84.7% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.54 | 48.0 | 3.83e-01 | 100.0% | 78.2% |
| 2v1yA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 37.0 | 3.26e-01 | 78.0% | 47.2% |
| 3tcaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 34.0 | 3.11e-01 | 79.7% | 42.2% |
| 3t91B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 41.0 | 2.80e-01 | 84.7% | 33.3% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 34.0 | 2.76e-01 | 72.9% | 30.8% |
| 5ekaA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.53 | 42.0 | 3.75e-01 | 100.0% | 60.0% |
| 2bvbA00 | 2.60.120.710 | Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 | 0.53 | 39.0 | 3.09e-01 | 89.8% | 35.0% |
| 3klqA01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.32e-01 | 86.4% | 61.3% |
| 4mfzA02 | 3.40.630.120 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.53 | 39.0 | 3.02e-01 | 81.4% | 34.0% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.52 | 39.0 | 2.70e-01 | 81.4% | 26.8% |
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.52 | 39.0 | 2.96e-01 | 88.1% | 62.5% |
| 4zg5A00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.52 | 44.0 | 2.98e-01 | 100.0% | 60.7% |
| 2r5rA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.52 | 43.0 | 2.93e-01 | 98.3% | 39.0% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 35.0 | 2.43e-01 | 71.2% | 25.9% |
| 1j72A01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 40.0 | 3.31e-01 | 89.8% | 45.0% |
| 2byvE05 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 33.0 | 3.04e-01 | 78.0% | 48.1% |
| 2kt4B01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 42.0 | 3.32e-01 | 100.0% | 91.5% |
| 3n77A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 40.0 | 3.14e-01 | 89.8% | 79.4% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.37e-01 | 88.1% | 85.3% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589882 | 4325.1.1.7 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 | 0.75 | 58.0 | 6.16e-01 | 94.9% | 98.0% |
| 4534466 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.73 | 46.0 | 3.88e-01 | 100.0% | 40.0% |
| 4938125 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.72 | 64.0 | 5.68e-01 | 100.0% | 69.4% |
| 5021185 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.72 | 53.0 | 3.84e-01 | 100.0% | 27.4% |
| 3709549 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.71 | 62.0 | 4.51e-01 | 100.0% | 53.3% |
| 4995243 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.70 | 53.0 | 4.87e-01 | 81.4% | 96.0% |
| 3619246 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 58.0 | 4.86e-01 | 100.0% | 75.2% |
| 3896280 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.67 | 43.0 | 4.04e-01 | 100.0% | 52.0% |
| 3191004 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.67 | 53.0 | 2.95e-01 | 88.1% | 10.7% |
| 5053329 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 58.0 | 4.65e-01 | 100.0% | 55.0% |
| 4034091 | 4325.1.1.7 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 | 0.66 | 50.0 | 5.34e-01 | 93.2% | 100.0% |
| 5077459 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 54.0 | 4.21e-01 | 98.3% | 41.4% |
| 5081878 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 57.0 | 3.55e-01 | 100.0% | 33.9% |
| 3943930 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.65 | 49.0 | 5.22e-01 | 100.0% | 100.0% |
| 3546312 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.65 | 55.0 | 4.60e-01 | 100.0% | 79.1% |
| 3307236 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 53.0 | 4.33e-01 | 96.6% | 47.5% |
| 3214812 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.64 | 51.0 | 4.41e-01 | 94.9% | 55.3% |
| 3512923 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.64 | 43.0 | 3.33e-01 | 71.2% | 67.9% |
| 3587631 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.64 | 48.0 | 3.64e-01 | 98.3% | 34.3% |
| 3717426 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.64 | 47.0 | 2.86e-01 | 79.7% | 73.8% |
| 4027577 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 45.0 | 3.54e-01 | 74.6% | 41.6% |
| 3080512 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.63 | 51.0 | 4.48e-01 | 100.0% | 58.8% |
| 4407937 | 3957.1.1.2 ↗ | a+b two layers › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › DUF4611 | 0.62 | 47.0 | 4.77e-01 | 84.7% | 96.7% |
| 4411025 | 284.1.3.3 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF4346 | 0.62 | 48.0 | 4.39e-01 | 94.9% | 63.7% |
| 3677778 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.62 | 45.0 | 2.89e-01 | 79.7% | 20.0% |
| 4034385 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.61 | 45.0 | 3.67e-01 | 83.1% | 41.8% |
| 3487886 | 2485.2.1.0 ↗ | a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain | 0.61 | 52.0 | 4.41e-01 | 100.0% | 92.4% |
| 3291744 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.61 | 50.0 | 4.54e-01 | 96.6% | 68.8% |
| 387703 | 636.1.1.1 ↗ | alpha arrays › SopE-like GEF domain › SopE-like GEF domain › SopE-like GEF domain › IpaB_EvcA | 0.59 | 48.0 | 3.30e-01 | 86.4% | 84.4% |
| 3786356 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.59 | 44.0 | 3.74e-01 | 89.8% | 45.5% |
| 4968695 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.59 | 51.0 | 3.77e-01 | 98.3% | 65.0% |
| 4987718 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.59 | 46.0 | 4.19e-01 | 86.4% | 90.0% |
| 3818469 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.59 | 48.0 | 3.81e-01 | 91.5% | 44.8% |
| 3883825 | 220.1.1.173 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK | 0.59 | 47.0 | 3.87e-01 | 100.0% | 46.6% |
| 3517917 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.59 | 46.0 | 4.47e-01 | 86.4% | 100.0% |
| 3321360 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.59 | 50.0 | 4.68e-01 | 100.0% | 86.7% |
| 3514912 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.58 | 46.0 | 4.37e-01 | 96.6% | 72.0% |
| 4810631 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.58 | 39.0 | 2.48e-01 | 83.1% | 12.5% |
| 5049357 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 46.0 | 3.95e-01 | 98.3% | 51.8% |
| 4979132 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.57 | 46.0 | 3.75e-01 | 98.3% | 44.5% |
| 3533796 | 2003.1.1.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.57 | 50.0 | 3.14e-01 | 100.0% | 37.6% |
| 4297175 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.57 | 47.0 | 4.18e-01 | 98.3% | 62.2% |
| 4089268 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.57 | 44.0 | 3.82e-01 | 83.1% | 61.1% |
| 5079724 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 40.0 | 3.47e-01 | 88.1% | 44.8% |
| 3805000 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 46.0 | 3.11e-01 | 94.9% | 35.5% |
| 4217523 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.56 | 42.0 | 3.33e-01 | 81.4% | 39.2% |
| 3170899 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.56 | 45.0 | 3.78e-01 | 91.5% | 93.3% |
| 3457901 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.55 | 39.0 | 2.84e-01 | 74.6% | 67.9% |
| 5060239 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.55 | 46.0 | 3.07e-01 | 96.6% | 64.6% |
| 3591474 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.55 | 42.0 | 2.89e-01 | 84.7% | 68.2% |
| 4089593 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.55 | 46.0 | 3.71e-01 | 100.0% | 47.7% |
| 3663084 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.55 | 49.0 | 3.68e-01 | 100.0% | 86.9% |
| 3351840 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.55 | 40.0 | 3.93e-01 | 83.1% | 71.0% |
| 4943515 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.55 | 48.0 | 3.22e-01 | 100.0% | 65.7% |
| 3582308 | 220.1.1.16 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF1681 | 0.55 | 39.0 | 3.42e-01 | 88.1% | 47.4% |
| 4394739 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.54 | 42.0 | 4.09e-01 | 94.9% | 75.7% |
| 3701911 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.54 | 43.0 | 3.05e-01 | 94.9% | 33.2% |
| 3999127 | 109.21.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 | 0.54 | 39.0 | 2.23e-01 | 79.7% | 9.6% |
| 3573883 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.54 | 45.0 | 3.69e-01 | 100.0% | 54.4% |
| 3700547 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.53 | 43.0 | 2.47e-01 | 89.8% | 14.0% |
| 3641356 | 221.1.1.44 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD | 0.53 | 36.0 | 3.40e-01 | 84.7% | 56.0% |
| 4061415 | 4252.1.1.5 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › Svf1 | 0.53 | 42.0 | 3.12e-01 | 96.6% | 75.8% |
| 3620592 | 6155.1.1.15 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF846 | 0.53 | 43.0 | 3.35e-01 | 93.2% | 93.6% |
| 3698019 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.53 | 43.0 | 3.34e-01 | 94.9% | 45.5% |
| 3551623 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.53 | 41.0 | 3.38e-01 | 93.2% | 51.2% |
| 3593375 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 41.0 | 4.16e-01 | 96.6% | 100.0% |
| 5069442 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.52 | 40.0 | 2.75e-01 | 98.3% | 93.1% |
| 3626321 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.50 | 37.0 | 3.78e-01 | 96.6% | 89.1% |
| 3981752 | 829.1.1.1 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB | 0.50 | 45.0 | 3.49e-01 | 100.0% | 64.6% |
| 4141464 | 4099.1.1.22 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P | 0.50 | 40.0 | 3.41e-01 | 94.9% | 61.8% |
D3
medium
residues 75-156
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lysA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.77 | 70.0 | 6.41e-01 | 100.0% | 85.7% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.72 | 52.0 | 5.24e-01 | 75.6% | 75.9% |
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.72 | 63.0 | 6.20e-01 | 96.3% | 100.0% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.67 | 58.0 | 5.57e-01 | 97.6% | 89.4% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 39.0 | 4.10e-01 | 97.6% | 70.3% |
| 4esjA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 52.0 | 5.05e-01 | 93.9% | 91.1% |
| 1td6A03 | 1.10.472.40 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 | 0.61 | 44.0 | 4.33e-01 | 93.9% | 69.6% |
| 2lpbA00 | 1.10.287.2920 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 40.0 | 4.06e-01 | 93.9% | 67.9% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 39.0 | 4.11e-01 | 95.1% | 74.3% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.60 | 36.0 | 3.93e-01 | 92.7% | 73.5% |
| 3qdkA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 48.0 | 3.46e-01 | 96.3% | 77.9% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 37.0 | 4.17e-01 | 89.0% | 87.1% |
| 1vt0M05 | 6.10.280.90 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 37.0 | 3.89e-01 | 75.6% | 73.0% |
| 2yi9A05 | 1.20.1270.270 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain | 0.57 | 36.0 | 3.68e-01 | 90.2% | 66.2% |
| 2wyoA03 | 1.10.1080.10 | Mainly Alpha › Orthogonal Bundle › Glutathione Synthetase; Chain A, domain 3 › Glutathione Synthetase; Chain A, domain 3 | 0.57 | 39.0 | 4.06e-01 | 98.8% | 78.7% |
| 4xxfA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.56 | 47.0 | 3.31e-01 | 93.9% | 30.1% |
| 3vibA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 39.0 | 3.06e-01 | 74.4% | 61.1% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.56 | 39.0 | 3.93e-01 | 75.6% | 97.7% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.55 | 38.0 | 4.02e-01 | 93.9% | 79.7% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 39.0 | 3.70e-01 | 84.1% | 63.5% |
| 4lwsA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 36.0 | 3.42e-01 | 93.9% | 57.0% |
| 1j77A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.54 | 47.0 | 3.62e-01 | 100.0% | 79.4% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.53 | 44.0 | 4.46e-01 | 95.1% | 98.7% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.53 | 36.0 | 4.07e-01 | 91.5% | 92.2% |
| 4lqkA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.52 | 43.0 | 3.67e-01 | 90.2% | 59.1% |
| 1hw1A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.52 | 39.0 | 3.31e-01 | 82.9% | 64.2% |
| 3u5nA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 43.0 | 3.90e-01 | 95.1% | 94.2% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 39.0 | 3.77e-01 | 86.6% | 77.8% |
| 1af7A01 | 1.10.155.10 | Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain | 0.51 | 28.0 | 2.83e-01 | 100.0% | 51.2% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4980637 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.68 | 52.0 | 4.90e-01 | 82.9% | 76.0% |
| 3258043 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.66 | 49.0 | 4.46e-01 | 79.3% | 98.2% |
| 3193435 | 3755.3.1.451 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › BUD22 | 0.62 | 54.0 | 4.66e-01 | 100.0% | 81.5% |
| 3742359 | 3361.1.1.1 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › RAC_head | 0.62 | 39.0 | 3.80e-01 | 100.0% | 55.8% |
| 3798329 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.61 | 47.0 | 4.35e-01 | 85.4% | 99.1% |
| 3742678 | 3416.1.1.1 ↗ | a+b complex topology › Mediator co-activator domain 1 of Gal11/med15 › Mediator co-activator domain 1 of Gal11/med15 › Mediator co-activator domain 1 of Gal11/med15 › Gal11_ABD1 | 0.60 | 41.0 | 4.12e-01 | 96.3% | 68.2% |
| 4683234 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.59 | 39.0 | 3.82e-01 | 92.7% | 61.1% |
| 3503171 | 2484.1.1.250 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046 | 0.59 | 51.0 | 3.83e-01 | 97.6% | 91.4% |
| 4972063 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.58 | 50.0 | 3.71e-01 | 98.8% | 88.4% |
| 5013621 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.56 | 48.0 | 3.50e-01 | 97.6% | 82.5% |
| 3781056 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.56 | 46.0 | 3.85e-01 | 90.2% | 69.7% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.55 | 37.0 | 3.79e-01 | 89.0% | 68.8% |
| 4971640 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 46.0 | 3.07e-01 | 96.3% | 20.8% |
| 3784853 | 109.4.1.182 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS,DCB | 0.55 | 47.0 | 3.18e-01 | 100.0% | 23.5% |
| 3401715 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.55 | 45.0 | 3.29e-01 | 90.2% | 44.9% |
| 5073312 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.55 | 46.0 | 3.44e-01 | 97.6% | 84.8% |
| 3385981 | 589.1.1.2 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 | 0.54 | 40.0 | 2.89e-01 | 76.8% | 89.6% |
| 5042372 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 42.0 | 3.94e-01 | 85.4% | 76.0% |
| 3399010 | 5059.1.1.5 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA | 0.53 | 44.0 | 2.98e-01 | 91.5% | 64.1% |
| 3976109 | 632.7.1.61 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › BREX_BrxC_helical | 0.53 | 40.0 | 3.74e-01 | 86.6% | 63.8% |
| 3637603 | 4156.1.1.2 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C | 0.53 | 46.0 | 3.52e-01 | 100.0% | 51.7% |
| 4570259 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.52 | 45.0 | 3.63e-01 | 100.0% | 61.8% |
| 3838347 | 589.1.1.2 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 | 0.52 | 38.0 | 2.98e-01 | 78.0% | 68.6% |
| 3593373 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.52 | 44.0 | 3.64e-01 | 97.6% | 66.3% |
| 3249530 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.52 | 45.0 | 3.85e-01 | 96.3% | 65.2% |
| 3624023 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.52 | 40.0 | 3.54e-01 | 86.6% | 84.6% |
| 3965844 | 589.1.1.2 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N_3 | 0.52 | 37.0 | 3.00e-01 | 75.6% | 70.0% |
| 4026926 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.52 | 41.0 | 3.54e-01 | 87.8% | 94.1% |
| 3613434 | 4299.1.1.0 ↗ | alpha arrays › BSD domain › BSD domain › BSD domain | 0.51 | 42.0 | 4.24e-01 | 91.5% | 89.4% |
| 4600908 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 44.0 | 2.72e-01 | 100.0% | 39.6% |
| 5032817 | 633.31.1.1 ↗ | alpha bundles › Bromodomain-like › Four-helical bundle insertion domain in pyruvate-ferredoxin oxidoreductase › Four-helical bundle insertion domain in pyruvate-ferredoxin oxidoreductase › Pyruv_OxRed_insertion | 0.51 | 37.0 | 4.05e-01 | 100.0% | 100.0% |
| 3932046 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.51 | 39.0 | 3.82e-01 | 82.9% | 90.0% |
| 3424514 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.50 | 37.0 | 3.34e-01 | 79.3% | 55.8% |