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OP028995.1__UUJ74500.1__X__00023
Bact-VirOP028995.1__UUJ74500.1__X__00023
Identity
- Accession:
- OP028995 ↗
- Kingdom:
- phage
Quality
76.0
mean pLDDT
Taxonomy
TaxID: 2969983
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-83
Domain cluster:
rep: NC_054965.1__YP_010078863.1__KMC53_gp48__00048__D4-87
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.64 | 53.0 | 3.97e-01 | 92.4% | 62.1% |
| 2d9vA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 50.0 | 4.55e-01 | 86.1% | 100.0% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 47.0 | 4.55e-01 | 79.7% | 78.2% |
| 1x05A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 51.0 | 4.35e-01 | 92.4% | 88.4% |
| 1evlA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.61 | 41.0 | 3.74e-01 | 70.9% | 92.9% |
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 36.0 | 3.61e-01 | 75.9% | 57.5% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 31.0 | 3.78e-01 | 72.2% | 78.0% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 34.0 | 3.61e-01 | 73.4% | 63.0% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 33.0 | 3.51e-01 | 77.2% | 60.0% |
| 5xamA03 | 3.30.1360.200 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 46.0 | 3.91e-01 | 84.8% | 100.0% |
| 4v0bA00 | 3.30.720.210 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 33.0 | 3.61e-01 | 77.2% | 71.4% |
| 1f9qD00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 36.0 | 3.83e-01 | 77.2% | 77.3% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 35.0 | 3.72e-01 | 72.2% | 70.8% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 35.0 | 3.78e-01 | 77.2% | 75.8% |
| 6b4oA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 37.0 | 3.24e-01 | 84.8% | 44.9% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 45.0 | 4.05e-01 | 88.6% | 73.1% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.55 | 41.0 | 2.68e-01 | 82.3% | 93.3% |
| 3kolA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 39.0 | 3.30e-01 | 74.7% | 65.2% |
| 4agsA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 38.0 | 3.72e-01 | 72.2% | 96.5% |
| 3oyyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 35.0 | 3.82e-01 | 75.9% | 80.0% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 47.0 | 4.34e-01 | 94.9% | 99.0% |
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.54 | 39.0 | 3.35e-01 | 77.2% | 83.3% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 33.0 | 3.28e-01 | 73.4% | 57.0% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 34.0 | 3.81e-01 | 78.5% | 83.6% |
| 1yr1A00 | 3.40.50.10960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 37.0 | 3.26e-01 | 72.2% | 70.6% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 29.0 | 3.35e-01 | 78.5% | 74.5% |
| 7c9rH01 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.53 | 40.0 | 3.39e-01 | 84.8% | 84.5% |
| 4gf0A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 36.0 | 3.42e-01 | 70.9% | 86.3% |
| 4exjB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 36.0 | 3.36e-01 | 70.9% | 82.2% |
| 3oyyB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 31.0 | 3.52e-01 | 74.7% | 79.3% |
| 2d7vB00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 37.0 | 3.09e-01 | 79.7% | 98.7% |
| 3ab1A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 35.0 | 3.06e-01 | 78.5% | 46.0% |
| 2b3yA05 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.50 | 42.0 | 3.14e-01 | 98.7% | 81.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3998421 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.68 | 48.0 | 5.27e-01 | 78.5% | 90.8% |
| 3269367 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 50.0 | 4.78e-01 | 92.4% | 90.5% |
| 3506704 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 45.0 | 4.04e-01 | 81.0% | 85.2% |
| 3660755 | 4.8.1.21 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor | 0.60 | 39.0 | 3.99e-01 | 79.7% | 69.3% |
| 3790904 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.59 | 38.0 | 4.20e-01 | 79.7% | 85.0% |
| 3660244 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.59 | 38.0 | 3.94e-01 | 77.2% | 69.3% |
| 3258931 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.54 | 37.0 | 2.61e-01 | 70.9% | 78.2% |
| 3574264 | 109.4.1.213 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FancD2 | 0.52 | 39.0 | 2.33e-01 | 97.5% | 8.6% |
| 3622974 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.52 | 36.0 | 3.24e-01 | 73.4% | 64.3% |
| 3500438 | 5.1.4.277 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 | 0.52 | 36.0 | 2.71e-01 | 74.7% | 92.7% |
| 3361876 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.52 | 38.0 | 3.30e-01 | 77.2% | 75.2% |
| 5876 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.51 | 38.0 | 3.11e-01 | 79.7% | 97.4% |
| 4493573 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.51 | 40.0 | 3.10e-01 | 89.9% | 53.0% |
| 3763123 | 5.1.4.371 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Frtz | 0.51 | 35.0 | 2.24e-01 | 72.2% | 85.2% |
| 3373766 | 7.1.1.7 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 | 0.51 | 38.0 | 3.12e-01 | 81.0% | 74.0% |
| 4281428 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.50 | 37.0 | 3.24e-01 | 81.0% | 73.8% |