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OP028995.1__UUJ74524.1__X__00047
Bact-VirOP028995.1__UUJ74524.1__X__00047
Identity
- Accession:
- OP028995 ↗
- Kingdom:
- phage
Quality
79.1
mean pLDDT
Taxonomy
TaxID: 2969983
Cluster
View cluster (166 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 86-172
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h84A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 34.0 | 2.93e-01 | 93.1% | 39.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3923371 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 45.0 | 3.04e-01 | 82.8% | 57.1% |
| 3194338 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 44.0 | 3.42e-01 | 85.1% | 88.9% |
| 3819797 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 27.0 | 2.57e-01 | 85.1% | 39.0% |
| 3210245 | 192.8.1.342 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PHM7_cyt | 0.51 | 38.0 | 3.94e-01 | 81.6% | 82.5% |
| 3789297 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 39.0 | 3.51e-01 | 85.1% | 70.8% |
| 5050732 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.51 | 42.0 | 3.78e-01 | 89.7% | 82.5% |
D2
medium
residues 173-262_279-358
Domain cluster:
rep: DQ340064.2__ABC61276.1__X__00022__D272-425
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e0zC03 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.78 | 45.0 | 5.89e-01 | 98.2% | 100.0% |
| 2pk8A00 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.77 | 43.0 | 5.76e-01 | 74.7% | 100.0% |
| 3bjqA00 | 3.90.1690.10 | Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain | 0.70 | 66.0 | 5.40e-01 | 100.0% | 60.5% |
| 1ohgA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.70 | 43.0 | 5.43e-01 | 98.8% | 100.0% |
| 3bqwA02 | 3.30.1930.10 | Alpha Beta › 2-Layer Sandwich › capsid protein of prophage fold › capsid protein of prophage domain | 0.60 | 47.0 | 5.20e-01 | 93.5% | 100.0% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 19.0 | 2.82e-01 | 98.8% | 75.4% |
| 4x9xA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.51 | 35.0 | 4.12e-01 | 70.6% | 100.0% |
| 5hn3A00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.51 | 36.0 | 2.92e-01 | 97.6% | 36.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 11367 | 2485.3.1.6 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › ENCP4 | 0.77 | 43.0 | 5.76e-01 | 74.7% | 100.0% |
| 4873245 | 2485.3.1.2 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 | 0.74 | 54.0 | 6.15e-01 | 75.9% | 100.0% |
| 1005479 | 2485.3.1.1 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E | 0.71 | 66.0 | 5.14e-01 | 100.0% | 60.5% |
| 4815223 | 2485.3.1.7 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Major_capside | 0.63 | 59.0 | 5.47e-01 | 99.4% | 83.1% |
| 4097188 | 298.4.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › FliH | 0.60 | 32.0 | 3.86e-01 | 80.0% | 78.2% |
| 3981522 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.59 | 30.0 | 3.69e-01 | 82.9% | 75.5% |
| 4412841 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.55 | 30.0 | 3.31e-01 | 77.1% | 63.7% |
| 3720134 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.54 | 33.0 | 3.79e-01 | 93.5% | 84.2% |
| 3529383 | 301.1.1.5 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › SpoU_sub_bind | 0.53 | 26.0 | 3.20e-01 | 93.5% | 72.4% |
| 3264087 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 31.0 | 3.79e-01 | 97.1% | 89.1% |
| 1937200 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.51 | 35.0 | 4.00e-01 | 70.6% | 99.2% |
| 4230774 | 101.1.9.117 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_assoc | 0.51 | 26.0 | 3.23e-01 | 90.6% | 82.1% |
| 3221897 | 301.1.1.5 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › SpoU_sub_bind | 0.51 | 27.0 | 3.56e-01 | 91.2% | 95.6% |