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OP039102.1__UYD72214.1__X__00075

Bact-Vir

OP039102.1__UYD72214.1__X__00075

Identity

Accession:
OP039102 ↗
Kingdom:
phage

Quality

92.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Kayvirus› Staphylococcus_phage_LJT-1

TaxID: 2978978

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-68
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v66A00 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.63 51.0 5.18e-01 95.5% 93.8%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 49.0 4.09e-01 100.0% 61.4%
2m0rA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 35.0 3.15e-01 74.6% 80.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5067137 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 38.0 4.01e-01 100.0% 65.0%
3483046 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 33.0 3.48e-01 100.0% 66.7%
4680538 3265.1.1.1 ↗ alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st 0.54 44.0 4.19e-01 97.0% 80.0%
4944093 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.40e-01 100.0% 54.4%
3643500 632.1.1.10 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › DUF3490 0.52 42.0 3.41e-01 97.0% 84.0%
4558680 101.1.2.807 ↗ alpha arrays › HTH › HTH › winged helix domain › MC6 0.50 35.0 3.37e-01 100.0% 62.5%