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OP053362.1__UYE97281.1__X__00116
Bact-VirOP053362.1__UYE97281.1__X__00116
Identity
- Accession:
- OP053362 ↗
- Kingdom:
- phage
Quality
60.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 687-780_1386-1459
Domain cluster:
rep: NC_070960.1__YP_010669387.1__PQC10_gp188__00125__D923-1107
CATH (70)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jqwC00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 44.0 | 5.16e-01 | 98.8% | 80.2% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.75 | 46.0 | 5.47e-01 | 99.4% | 88.0% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 42.0 | 5.22e-01 | 97.0% | 91.3% |
| 1yi9A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 46.0 | 5.04e-01 | 98.8% | 78.1% |
| 1stmA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.69 | 52.0 | 5.61e-01 | 100.0% | 91.5% |
| 1uijB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.69 | 36.0 | 3.65e-01 | 100.0% | 49.7% |
| 1yudA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 37.0 | 3.87e-01 | 100.0% | 56.8% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.66 | 50.0 | 5.39e-01 | 100.0% | 93.6% |
| 2vvfA02 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 46.0 | 5.21e-01 | 100.0% | 93.0% |
| 2hevF00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 45.0 | 5.08e-01 | 100.0% | 92.1% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.65 | 38.0 | 4.48e-01 | 95.2% | 82.8% |
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 48.0 | 5.36e-01 | 100.0% | 98.4% |
| 4o9gA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 34.0 | 3.75e-01 | 100.0% | 60.1% |
| 4i3gA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 41.0 | 4.92e-01 | 98.8% | 98.1% |
| 2qfeA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 45.0 | 4.84e-01 | 100.0% | 84.9% |
| 4lr4A02 | 2.60.120.1430 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 49.0 | 4.96e-01 | 100.0% | 79.8% |
| 3zn6A01 | 2.60.120.1170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 47.0 | 5.20e-01 | 100.0% | 94.0% |
| 2waoA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 37.0 | 4.35e-01 | 98.2% | 82.9% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 55.0 | 5.13e-01 | 100.0% | 75.2% |
| 3w5mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 46.0 | 4.33e-01 | 98.2% | 62.9% |
| 4madA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 39.0 | 4.27e-01 | 94.6% | 76.1% |
| 2y0oA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 39.0 | 3.89e-01 | 100.0% | 59.6% |
| 1xe7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 36.0 | 3.51e-01 | 100.0% | 49.5% |
| 7ehgC01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 46.0 | 5.23e-01 | 98.8% | 100.0% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 45.0 | 5.08e-01 | 100.0% | 95.5% |
| 2yc2A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 47.0 | 5.18e-01 | 100.0% | 100.0% |
| 1gwmA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.60 | 44.0 | 4.67e-01 | 100.0% | 83.7% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 51.0 | 4.68e-01 | 100.0% | 70.5% |
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 55.0 | 5.38e-01 | 100.0% | 93.5% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 54.0 | 4.74e-01 | 100.0% | 78.0% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 35.0 | 3.78e-01 | 100.0% | 67.1% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 54.0 | 4.68e-01 | 100.0% | 66.0% |
| 3kmhA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 36.0 | 3.35e-01 | 100.0% | 46.8% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 5.14e-01 | 100.0% | 93.3% |
| 3c7fA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 45.0 | 4.89e-01 | 100.0% | 95.1% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 4.72e-01 | 100.0% | 72.8% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 47.0 | 4.58e-01 | 100.0% | 76.7% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 50.0 | 5.02e-01 | 100.0% | 89.1% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 48.0 | 4.66e-01 | 100.0% | 79.8% |
| 3cihA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 39.0 | 4.47e-01 | 100.0% | 94.3% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 50.0 | 4.61e-01 | 100.0% | 72.3% |
| 1c8dA00 | 2.170.30.10 | Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 | 0.57 | 52.0 | 3.66e-01 | 100.0% | 86.3% |
| 6ovbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 44.0 | 4.63e-01 | 100.0% | 88.3% |
| 7wdtA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 48.0 | 5.05e-01 | 99.4% | 98.7% |
| 1mpxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 52.0 | 4.65e-01 | 100.0% | 86.6% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 52.0 | 4.51e-01 | 100.0% | 73.1% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 50.0 | 5.11e-01 | 100.0% | 97.0% |
| 4fixA01 | 3.90.550.60 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › | 0.57 | 48.0 | 3.60e-01 | 100.0% | 37.7% |
| 1ji6A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 45.0 | 4.60e-01 | 100.0% | 87.0% |
| 4lplA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 45.0 | 4.84e-01 | 98.2% | 97.9% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 49.0 | 4.73e-01 | 100.0% | 82.7% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 51.0 | 4.53e-01 | 100.0% | 74.8% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 51.0 | 4.32e-01 | 100.0% | 70.3% |
| 4d8mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 44.0 | 4.44e-01 | 100.0% | 81.8% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 51.0 | 4.59e-01 | 100.0% | 74.5% |
| 2wraA00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.55 | 37.0 | 4.35e-01 | 94.6% | 95.1% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 50.0 | 4.57e-01 | 100.0% | 74.3% |
| 2zxqA05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 51.0 | 4.82e-01 | 100.0% | 90.4% |
| 1guiA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 46.0 | 4.84e-01 | 98.8% | 98.1% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 50.0 | 4.34e-01 | 100.0% | 69.2% |
| 3k4zA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 49.0 | 4.98e-01 | 100.0% | 100.0% |
| 8b38A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 50.0 | 4.52e-01 | 100.0% | 90.7% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 4.42e-01 | 100.0% | 74.4% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 4.46e-01 | 100.0% | 73.5% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 4.26e-01 | 100.0% | 65.8% |
| 1nlrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.53 | 48.0 | 4.36e-01 | 98.2% | 82.9% |
| 1sidF00 | 2.60.175.10 | Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus | 0.53 | 47.0 | 3.77e-01 | 100.0% | 74.0% |
| 3gbwA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.53 | 45.0 | 4.64e-01 | 99.4% | 96.9% |
| 4bpzA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 47.0 | 4.13e-01 | 100.0% | 97.6% |
| 3m3iB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 34.0 | 3.42e-01 | 100.0% | 65.7% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508967 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.77 | 48.0 | 5.79e-01 | 97.0% | 94.5% |
| 3245210 | 10.32.1.213 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 | 0.76 | 49.0 | 5.51e-01 | 98.2% | 83.8% |
| 4942975 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.72 | 48.0 | 5.67e-01 | 100.0% | 98.3% |
| 4019681 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.72 | 49.0 | 5.31e-01 | 98.8% | 82.1% |
| 3609787 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.72 | 45.0 | 5.04e-01 | 95.8% | 78.5% |
| 5040310 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.72 | 48.0 | 5.71e-01 | 98.8% | 100.0% |
| 4166998 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 50.0 | 5.57e-01 | 97.0% | 89.6% |
| 4011220 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 50.0 | 5.69e-01 | 99.4% | 97.6% |
| 4525375 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.69 | 48.0 | 5.41e-01 | 98.8% | 91.5% |
| 4551881 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.68 | 49.0 | 4.98e-01 | 100.0% | 74.5% |
| 3617763 | 10.2.1.39 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C | 0.68 | 48.0 | 4.81e-01 | 99.4% | 69.7% |
| 3353531 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 45.0 | 4.91e-01 | 98.8% | 81.4% |
| 3992449 | 10.32.1.213 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 | 0.67 | 48.0 | 5.19e-01 | 98.2% | 85.5% |
| 3322077 | 10.32.1.99 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Pga1 | 0.67 | 45.0 | 4.98e-01 | 99.4% | 86.9% |
| 3505636 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.67 | 45.0 | 5.17e-01 | 94.0% | 94.2% |
| 5035593 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 42.0 | 5.07e-01 | 94.6% | 100.0% |
| 3804459 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.66 | 46.0 | 5.06e-01 | 98.8% | 88.1% |
| 4943258 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.65 | 43.0 | 4.99e-01 | 98.8% | 92.5% |
| 2321067 | 10.12.1.13 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Pirin | 0.65 | 37.0 | 3.96e-01 | 100.0% | 62.6% |
| 3561036 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 48.0 | 4.61e-01 | 100.0% | 66.7% |
| 3691986 | 10.32.1.246 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PalB_C | 0.64 | 49.0 | 5.16e-01 | 100.0% | 87.1% |
| 1693517 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.64 | 55.0 | 5.14e-01 | 100.0% | 76.0% |
| 3785573 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 44.0 | 5.05e-01 | 100.0% | 97.5% |
| 3690841 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 47.0 | 5.25e-01 | 99.4% | 96.3% |
| 5070388 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.63 | 45.0 | 4.83e-01 | 98.8% | 84.1% |
| 4026940 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 43.0 | 4.42e-01 | 100.0% | 70.9% |
| 1111986 | 10.32.1.84 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF6947 | 0.63 | 49.0 | 5.18e-01 | 100.0% | 92.5% |
| 3360663 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 38.0 | 3.91e-01 | 91.1% | 61.8% |
| 3320826 | 10.32.1.76 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd | 0.62 | 42.0 | 4.17e-01 | 95.8% | 64.4% |
| 3404051 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 53.0 | 5.52e-01 | 100.0% | 98.1% |
| 4135739 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.62 | 48.0 | 5.08e-01 | 100.0% | 91.9% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.62 | 53.0 | 4.94e-01 | 100.0% | 74.2% |
| 3379879 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 42.0 | 4.37e-01 | 95.8% | 73.1% |
| 3909542 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.61 | 51.0 | 4.72e-01 | 100.0% | 70.0% |
| 3805853 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.61 | 46.0 | 4.38e-01 | 100.0% | 66.7% |
| 3181785 | 10.32.1.23 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Bac_rhamnosid | 0.61 | 43.0 | 4.78e-01 | 100.0% | 92.3% |
| 4015340 | 10.32.1.232 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 | 0.61 | 53.0 | 5.12e-01 | 100.0% | 84.3% |
| 3889464 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 50.0 | 5.24e-01 | 100.0% | 97.3% |
| 1877512 | 10.2.1.32 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N | 0.60 | 55.0 | 5.39e-01 | 100.0% | 92.9% |
| 1867996 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.60 | 52.0 | 4.43e-01 | 100.0% | 58.9% |
| 4059713 | 10.12.1.29 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CDO_I | 0.60 | 37.0 | 3.55e-01 | 100.0% | 51.5% |
| 1724852 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.59 | 50.0 | 5.08e-01 | 100.0% | 90.4% |
| 3399280 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.59 | 41.0 | 4.61e-01 | 100.0% | 92.3% |
| 3314656 | 207.1.1.119 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 | 0.59 | 43.0 | 2.98e-01 | 99.4% | 23.8% |
| 4667107 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.58 | 47.0 | 5.09e-01 | 99.4% | 98.6% |
| 4960572 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 50.0 | 5.07e-01 | 100.0% | 92.1% |
| 4542786 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.58 | 49.0 | 4.58e-01 | 100.0% | 72.4% |
| 4884619 | 10.2.1.9 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Parvo_coat | 0.58 | 53.0 | 3.69e-01 | 100.0% | 84.8% |
| 5034488 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 45.0 | 4.97e-01 | 98.8% | 100.0% |
| 146646 | 10.2.1.30 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 | 0.58 | 54.0 | 5.14e-01 | 100.0% | 88.6% |
| 4281343 | 10.9.1.0 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin | 0.58 | 49.0 | 5.11e-01 | 100.0% | 99.4% |
| 2721878 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.58 | 53.0 | 4.64e-01 | 100.0% | 70.4% |
| 3190719 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 50.0 | 5.01e-01 | 100.0% | 91.4% |
| 3472554 | 10.32.1.6 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein | 0.56 | 48.0 | 4.86e-01 | 100.0% | 92.7% |
| 1313975 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.56 | 44.0 | 4.78e-01 | 100.0% | 97.9% |
| 1841617 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.56 | 52.0 | 4.50e-01 | 100.0% | 71.8% |
| 1886797 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.56 | 52.0 | 4.47e-01 | 100.0% | 68.8% |
| 3690784 | 10.1.1.22 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 | 0.55 | 50.0 | 4.49e-01 | 98.2% | 92.8% |
| 3620780 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.55 | 51.0 | 4.96e-01 | 100.0% | 96.8% |
| 4454790 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.55 | 35.0 | 3.21e-01 | 100.0% | 48.2% |
| 3490022 | 10.32.1.184 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Androglobin_II | 0.55 | 43.0 | 4.51e-01 | 85.1% | 90.7% |
| 3408307 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.55 | 40.0 | 4.35e-01 | 99.4% | 90.7% |
| 3509447 | 10.32.1.223 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1 | 0.55 | 48.0 | 4.89e-01 | 99.4% | 95.8% |
| 3580756 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.55 | 51.0 | 4.78e-01 | 100.0% | 90.0% |
| 169772 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.54 | 49.0 | 4.42e-01 | 100.0% | 74.4% |
| 4428166 | 10.12.1.25 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PhyH | 0.54 | 43.0 | 3.66e-01 | 100.0% | 50.5% |
| 3306288 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 45.0 | 4.71e-01 | 100.0% | 97.3% |
| 3400017 | 10.40.1.0 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain | 0.54 | 48.0 | 4.89e-01 | 98.8% | 100.0% |
| 3473996 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.54 | 49.0 | 4.17e-01 | 100.0% | 87.9% |
| 4127487 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.54 | 48.0 | 4.70e-01 | 100.0% | 88.6% |
| 3923894 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 47.0 | 4.83e-01 | 100.0% | 99.4% |
| 3906025 | 10.32.1.189 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CAND6-7_N | 0.53 | 48.0 | 4.87e-01 | 100.0% | 97.6% |
| 4656693 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.52 | 44.0 | 4.60e-01 | 100.0% | 98.7% |
| 1125168 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.52 | 48.0 | 4.20e-01 | 100.0% | 99.2% |
| 3256283 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 47.0 | 4.66e-01 | 100.0% | 99.4% |
| 3560244 | 10.32.1.223 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1 | 0.52 | 46.0 | 4.60e-01 | 100.0% | 91.4% |
| 3223746 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 45.0 | 4.46e-01 | 100.0% | 88.3% |
| 3586277 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 4.11e-01 | 100.0% | 100.0% |
| 3415694 | 10.40.1.0 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain | 0.51 | 44.0 | 4.56e-01 | 98.2% | 99.4% |
| 3779843 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.51 | 42.0 | 3.31e-01 | 100.0% | 42.6% |
D2
high
residues 1147-1238
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 59.0 | 5.96e-01 | 98.9% | 97.8% |
| 4dk0A02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 57.0 | 5.78e-01 | 100.0% | 97.8% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 58.0 | 5.60e-01 | 100.0% | 86.5% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 59.0 | 5.70e-01 | 100.0% | 89.5% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 43.0 | 4.20e-01 | 73.9% | 61.6% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 52.0 | 5.43e-01 | 98.9% | 97.6% |
| 1vf7F01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.64 | 56.0 | 5.44e-01 | 98.9% | 98.0% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.64 | 56.0 | 5.37e-01 | 98.9% | 95.4% |
| 1yloE02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.63 | 53.0 | 5.52e-01 | 98.9% | 100.0% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.62 | 47.0 | 3.87e-01 | 81.5% | 47.1% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 56.0 | 5.36e-01 | 98.9% | 99.0% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 52.0 | 4.66e-01 | 98.9% | 65.6% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 56.0 | 5.34e-01 | 98.9% | 99.0% |
| 5tr9A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 55.0 | 5.49e-01 | 100.0% | 95.8% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.62 | 53.0 | 4.99e-01 | 97.8% | 94.7% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.61 | 53.0 | 5.19e-01 | 100.0% | 91.2% |
| 2ok7A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 53.0 | 5.04e-01 | 98.9% | 90.2% |
| 2d9rA00 | 2.40.30.100 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like | 0.61 | 49.0 | 5.10e-01 | 97.8% | 97.6% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.61 | 44.0 | 4.44e-01 | 77.2% | 83.9% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.60 | 52.0 | 4.47e-01 | 98.9% | 59.1% |
| 4dj3B01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 42.0 | 3.99e-01 | 73.9% | 96.4% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 53.0 | 5.06e-01 | 98.9% | 89.6% |
| 4l8jA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.59 | 52.0 | 5.15e-01 | 100.0% | 94.7% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.58 | 46.0 | 4.09e-01 | 100.0% | 58.0% |
| 1y7eA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.57 | 50.0 | 4.66e-01 | 98.9% | 100.0% |
| 4m4xA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 39.0 | 3.60e-01 | 73.9% | 96.8% |
| 1p97A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 38.0 | 3.59e-01 | 70.7% | 93.9% |
| 2ea3A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 38.0 | 4.01e-01 | 89.1% | 79.8% |
| 4xvhA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 36.0 | 3.49e-01 | 100.0% | 59.8% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.53 | 39.0 | 3.36e-01 | 84.8% | 48.3% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 44.0 | 3.51e-01 | 92.4% | 98.4% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 37.0 | 3.25e-01 | 75.0% | 81.2% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 3.67e-01 | 83.7% | 79.0% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.97e-01 | 98.9% | 81.2% |
| 3luqB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 35.0 | 3.32e-01 | 72.8% | 93.0% |
| 1ji6A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 42.0 | 3.51e-01 | 92.4% | 89.5% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965956 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.70 | 60.0 | 6.10e-01 | 100.0% | 96.7% |
| 3970513 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.69 | 57.0 | 5.95e-01 | 98.9% | 96.5% |
| 4299010 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 58.0 | 5.83e-01 | 100.0% | 91.6% |
| 5053791 | 1.1.7.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › CTP-dep_RFKase | 0.68 | 62.0 | 5.37e-01 | 100.0% | 97.9% |
| 3973282 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.68 | 61.0 | 5.75e-01 | 100.0% | 95.5% |
| 3243970 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 62.0 | 6.07e-01 | 98.9% | 94.0% |
| 3973898 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.68 | 61.0 | 5.24e-01 | 100.0% | 76.6% |
| 4072524 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.68 | 57.0 | 5.43e-01 | 98.9% | 77.3% |
| 3237442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 61.0 | 5.98e-01 | 98.9% | 94.0% |
| 3971461 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 58.0 | 5.90e-01 | 100.0% | 98.9% |
| 3972307 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.67 | 42.0 | 5.01e-01 | 94.6% | 96.7% |
| 4400928 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.66 | 58.0 | 5.28e-01 | 98.9% | 72.0% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.66 | 58.0 | 5.39e-01 | 100.0% | 75.8% |
| 4020238 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.66 | 59.0 | 5.01e-01 | 98.9% | 86.7% |
| 4466667 | 1.1.7.95 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25990 | 0.66 | 59.0 | 5.53e-01 | 100.0% | 93.9% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.66 | 56.0 | 5.72e-01 | 100.0% | 96.7% |
| 3291549 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 59.0 | 5.69e-01 | 98.9% | 87.6% |
| 4606765 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.66 | 58.0 | 5.51e-01 | 100.0% | 82.7% |
| 3166182 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.65 | 55.0 | 5.61e-01 | 100.0% | 96.7% |
| 3837954 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.65 | 57.0 | 5.65e-01 | 100.0% | 95.8% |
| 4477675 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.65 | 57.0 | 5.47e-01 | 98.9% | 84.8% |
| 3266016 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.65 | 53.0 | 5.41e-01 | 92.4% | 92.2% |
| 5013322 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.64 | 45.0 | 4.99e-01 | 82.6% | 95.7% |
| 4033620 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.64 | 57.0 | 5.08e-01 | 98.9% | 71.5% |
| 4932996 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 56.0 | 5.70e-01 | 96.7% | 97.8% |
| 3968971 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.64 | 55.0 | 5.64e-01 | 100.0% | 98.9% |
| 4864011 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.64 | 56.0 | 5.42e-01 | 100.0% | 86.7% |
| 4154798 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.64 | 56.0 | 5.36e-01 | 100.0% | 91.8% |
| 3786133 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.64 | 58.0 | 5.63e-01 | 98.9% | 92.0% |
| 3997045 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.64 | 57.0 | 5.65e-01 | 98.9% | 96.8% |
| 3987844 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.63 | 56.0 | 5.59e-01 | 98.9% | 94.7% |
| 3963302 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.63 | 57.0 | 5.45e-01 | 98.9% | 90.5% |
| 3198252 | 1.1.17.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 | 0.63 | 47.0 | 3.82e-01 | 78.3% | 68.2% |
| 4132165 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 56.0 | 5.42e-01 | 98.9% | 88.6% |
| 4012163 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 47.0 | 4.40e-01 | 79.3% | 85.2% |
| 4249659 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.63 | 57.0 | 5.64e-01 | 98.9% | 95.8% |
| 3267872 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 54.0 | 4.84e-01 | 98.9% | 68.5% |
| 3668360 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.62 | 53.0 | 4.72e-01 | 98.9% | 64.4% |
| 4980160 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 54.0 | 5.33e-01 | 98.9% | 89.0% |
| 3929255 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.62 | 55.0 | 4.76e-01 | 98.9% | 64.8% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 52.0 | 5.27e-01 | 98.9% | 94.4% |
| 3552831 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.62 | 54.0 | 5.25e-01 | 98.9% | 94.3% |
| 5075926 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.62 | 55.0 | 5.35e-01 | 98.9% | 90.0% |
| 4413294 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.62 | 55.0 | 5.46e-01 | 98.9% | 94.7% |
| 3969131 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 55.0 | 5.46e-01 | 98.9% | 96.8% |
| 4069807 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.62 | 55.0 | 5.36e-01 | 98.9% | 93.0% |
| 4616814 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.61 | 53.0 | 5.23e-01 | 98.9% | 98.0% |
| 5055336 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 48.0 | 4.91e-01 | 93.5% | 86.7% |
| 5058648 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 55.0 | 5.47e-01 | 100.0% | 96.8% |
| 3955284 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.61 | 46.0 | 4.10e-01 | 83.7% | 59.3% |
| 3972868 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.59 | 52.0 | 5.13e-01 | 100.0% | 93.0% |
| 4136251 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.58 | 51.0 | 4.90e-01 | 100.0% | 88.6% |
| 4929151 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.57 | 41.0 | 3.84e-01 | 76.1% | 97.4% |
| 5013200 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.54 | 44.0 | 3.92e-01 | 91.3% | 85.0% |
| 4943623 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.43e-01 | 96.7% | 100.0% |
| 3940850 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 36.0 | 3.92e-01 | 85.9% | 90.7% |
D3
medium
residues 15-68
D4
medium
residues 105-120_569-665
Domain cluster:
rep: HQ698895.1__AEX56012.1__S-CBS4_gp045__00045__D246-312
D5
medium
residues 928-957_976-991_1068-1106_1125-1146_1239-1362