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OP068336.1__UVG34325.1__SEA_GRASSBOY_68__00068
Bact-VirOP068336.1__UVG34325.1__SEA_GRASSBOY_68__00068
Identity
- Accession:
- OP068336 ↗
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Taxonomy
TaxID: 2972511
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-77
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.91 | 72.0 | 4.92e-01 | 82.7% | 27.9% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.88 | 69.0 | 6.40e-01 | 81.3% | 68.9% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.86 | 66.0 | 5.49e-01 | 81.3% | 55.6% |
| 1oq4A00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.85 | 70.0 | 4.37e-01 | 100.0% | 18.8% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.81 | 66.0 | 5.89e-01 | 100.0% | 63.7% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.81 | 65.0 | 5.84e-01 | 100.0% | 63.7% |
| 5lbmA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.79 | 61.0 | 5.96e-01 | 84.0% | 74.7% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 61.0 | 6.01e-01 | 86.7% | 79.0% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 66.0 | 5.51e-01 | 96.0% | 62.5% |
| 1vh6A01 | 6.10.140.1940 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 60.0 | 5.55e-01 | 92.0% | 66.0% |
| 2c0gA02 | 1.20.1150.12 | Mainly Alpha › Up-down Bundle › Endoplasmic reticulum protein erp29 › Endoplasmic reticulum resident protein 29, C-terminal domain | 0.75 | 46.0 | 4.12e-01 | 98.7% | 44.3% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 55.0 | 4.14e-01 | 84.0% | 37.2% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.70 | 57.0 | 4.50e-01 | 93.3% | 42.7% |
| 4axzA00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.68 | 59.0 | 4.26e-01 | 98.7% | 39.9% |
| 7wujE01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.67 | 60.0 | 4.10e-01 | 100.0% | 74.4% |
| 2q83A02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.53 | 44.0 | 3.16e-01 | 93.3% | 38.2% |
| 4bwrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 37.0 | 2.42e-01 | 85.3% | 36.8% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4948369 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.93 | 72.0 | 5.72e-01 | 81.3% | 44.9% |
| 5078878 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.91 | 72.0 | 5.36e-01 | 82.7% | 37.6% |
| 3409452 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.89 | 61.0 | 5.82e-01 | 73.3% | 62.4% |
| 3451533 | 192.29.1.237 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF3755 | 0.88 | 59.0 | 5.82e-01 | 72.0% | 65.0% |
| 3988387 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.87 | 72.0 | 6.46e-01 | 100.0% | 65.0% |
| 3699630 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.87 | 69.0 | 5.61e-01 | 100.0% | 48.5% |
| 4809272 | 3291.1.1.4 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 | 0.83 | 66.0 | 5.54e-01 | 86.7% | 52.1% |
| 3978919 | 604.10.1.1 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA | 0.82 | 67.0 | 5.83e-01 | 100.0% | 59.1% |
| 3298699 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.82 | 61.0 | 4.40e-01 | 84.0% | 29.5% |
| 4511365 | 3922.1.1.133 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PRM1 | 0.81 | 63.0 | 4.42e-01 | 82.7% | 32.7% |
| 3992590 | 603.1.1.110 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF26585 | 0.78 | 66.0 | 5.93e-01 | 100.0% | 68.0% |
| 3875941 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.77 | 67.0 | 5.09e-01 | 93.3% | 57.6% |
| 5050919 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.75 | 57.0 | 4.95e-01 | 81.3% | 54.5% |
| 3773622 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.72 | 61.0 | 4.60e-01 | 93.3% | 42.8% |
| 5018436 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.71 | 59.0 | 4.27e-01 | 97.3% | 32.7% |
| 4978586 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.65 | 58.0 | 5.07e-01 | 97.3% | 82.7% |
| 3470992 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.63 | 43.0 | 3.96e-01 | 100.0% | 54.0% |
| 3913986 | 192.1.1.36 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › BAG6 | 0.62 | 51.0 | 4.63e-01 | 92.0% | 65.7% |
| 3640674 | 148.1.1.43 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PF30969 | 0.54 | 48.0 | 4.10e-01 | 98.7% | 80.8% |