←Back to structures

OP068337.1__UVG34474.1__SEA_GAZEBO_105__00105

Bact-Vir

OP068337.1__UVG34474.1__SEA_GAZEBO_105__00105

Identity

Accession:
OP068337 ↗
Kingdom:
phage

Quality

72.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Squashvirus› Microbacterium_phage_Gazebo

TaxID: 2972512

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-52
PDB
Domain cluster: representative
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3we0A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.76 49.0 3.06e-01 81.6% 12.2%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.73 48.0 2.87e-01 81.6% 9.1%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 53.0 4.83e-01 81.6% 68.7%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.70 45.0 4.48e-01 71.4% 62.7%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.68 44.0 4.38e-01 71.4% 62.7%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.68 43.0 4.33e-01 71.4% 62.7%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 48.0 4.46e-01 77.6% 68.2%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 54.0 4.64e-01 100.0% 75.8%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 49.0 3.31e-01 81.6% 21.9%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 49.0 4.49e-01 81.6% 74.2%
3hr8A02 3.30.250.10 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain 0.66 56.0 4.94e-01 100.0% 76.0%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.66 45.0 4.90e-01 79.6% 92.3%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 45.0 4.17e-01 73.5% 89.2%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 46.0 4.30e-01 79.6% 64.2%
3nkdA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.64 47.0 4.03e-01 81.6% 76.2%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 47.0 4.26e-01 83.7% 91.8%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 47.0 4.36e-01 81.6% 66.7%
3nbxX04 2.40.128.430 Mainly Beta › Beta Barrel › Lipocalin › 0.64 44.0 3.44e-01 71.4% 48.6%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 47.0 3.08e-01 81.6% 26.9%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 46.0 4.13e-01 81.6% 61.6%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 45.0 4.01e-01 81.6% 62.3%
1ub1A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.62 42.0 3.19e-01 71.4% 49.6%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.62 50.0 4.86e-01 93.9% 82.5%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 47.0 3.59e-01 85.7% 99.2%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.61 50.0 3.85e-01 93.9% 40.8%
3ho6B00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.61 51.0 3.28e-01 95.9% 43.9%
1fgyA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 43.0 3.38e-01 81.6% 58.7%
3n2oC01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.60 47.0 3.24e-01 91.8% 78.3%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.60 50.0 3.10e-01 98.0% 32.6%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.45e-01 81.6% 100.0%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.59 46.0 3.18e-01 89.8% 33.0%
3v9fA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 42.0 2.61e-01 77.6% 22.0%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.78e-01 95.9% 100.0%
3k8rA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.58 39.0 3.61e-01 71.4% 91.2%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.28e-01 89.8% 89.7%
2hqmA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 41.0 2.70e-01 75.5% 60.5%
4w8kA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.57 42.0 3.52e-01 81.6% 63.7%
1pmtA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 45.0 3.81e-01 95.9% 68.1%
2lqoA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 43.0 3.66e-01 85.7% 95.5%
3eebA00 3.40.50.11050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain 0.57 46.0 3.05e-01 91.8% 43.9%
3klkA01 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.57 40.0 2.93e-01 79.6% 47.8%
2uz8A01 3.40.30.90 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.57 44.0 4.37e-01 93.9% 94.4%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.56 39.0 3.24e-01 75.5% 86.6%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 3.68e-01 79.6% 93.2%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 45.0 3.47e-01 91.8% 99.2%
3jyyA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 38.0 2.92e-01 75.5% 91.0%
1rypD00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 46.0 3.03e-01 100.0% 71.0%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 44.0 4.28e-01 89.8% 92.7%
3m4aA03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.55 39.0 3.11e-01 79.6% 34.7%
3jyoA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.55 42.0 3.19e-01 91.8% 77.0%
4yapA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 42.0 3.31e-01 93.9% 51.6%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 40.0 3.27e-01 85.7% 42.1%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 40.0 3.24e-01 81.6% 86.5%
2auwA01 3.30.2020.10 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › NE0471-like N-terminal domain 0.53 36.0 3.13e-01 71.4% 79.3%
1c0gA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.53 36.0 3.14e-01 100.0% 41.3%
6efaA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 36.0 3.19e-01 71.4% 65.4%
6kzdA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 42.0 2.93e-01 93.9% 49.4%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 36.0 2.97e-01 75.5% 85.6%
2wbpA00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.52 40.0 2.52e-01 91.8% 38.6%
2vhjA02 2.30.270.20 Mainly Beta › Roll › duf1285 protein fold › 0.51 39.0 3.62e-01 81.6% 93.5%
7kfuC02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.51 44.0 2.86e-01 100.0% 46.8%
5kiqA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 35.0 3.18e-01 71.4% 61.1%
7d8gA01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.51 39.0 2.73e-01 85.7% 79.0%
2vxtI00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 40.0 2.97e-01 98.0% 64.1%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 40.0 2.49e-01 100.0% 84.5%
1a2fA02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.50 36.0 2.82e-01 81.6% 38.0%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5055783 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.78 55.0 4.52e-01 79.6% 41.1%
4625528 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.77 51.0 3.04e-01 81.6% 9.4%
1391704 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.77 49.0 3.62e-01 81.6% 25.4%
4933326 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.76 54.0 4.45e-01 77.6% 42.0%
4928472 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.75 51.0 4.43e-01 77.6% 45.0%
4937843 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.74 63.0 3.73e-01 98.0% 23.2%
5023419 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.73 63.0 3.53e-01 98.0% 15.0%
4634109 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.73 63.0 3.53e-01 98.0% 15.0%
2156991 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.72 49.0 2.93e-01 81.6% 9.9%
3789788 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.72 60.0 3.58e-01 98.0% 22.7%
3790093 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.71 60.0 3.46e-01 98.0% 17.8%
3602760 2003.1.5.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.71 52.0 3.12e-01 79.6% 27.4%
5028816 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.71 61.0 3.47e-01 100.0% 15.9%
4172704 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.70 50.0 4.82e-01 81.6% 67.3%
4178455 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.70 58.0 3.67e-01 100.0% 34.0%
4249852 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.69 57.0 3.60e-01 98.0% 34.9%
4288670 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.68 51.0 3.06e-01 81.6% 14.4%
4032637 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.68 47.0 4.56e-01 81.6% 65.5%
3404768 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.68 46.0 2.76e-01 81.6% 9.6%
3599142 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 48.0 4.52e-01 75.5% 83.3%
4780493 3293.1.1.1 ↗ beta barrels › LARA domain › LARA domain › LARA domain › LARA_dom 0.68 46.0 4.02e-01 71.4% 67.6%
4940177 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 46.0 4.14e-01 71.4% 50.0%
4966737 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.67 49.0 4.57e-01 77.6% 83.3%
4949453 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.67 47.0 4.33e-01 75.5% 83.1%
4933970 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.67 48.0 4.57e-01 77.6% 90.0%
3932457 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.66 54.0 3.41e-01 98.0% 30.0%
4021531 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 46.0 3.71e-01 73.5% 51.0%
3799828 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.66 49.0 3.05e-01 83.7% 15.6%
3219127 2003.1.2.130 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, Pyr_redox_2, NAD_binding_8 0.65 49.0 2.81e-01 81.6% 43.9%
2579116 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.65 47.0 4.43e-01 77.6% 83.9%
3514959 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.65 48.0 3.21e-01 81.6% 25.1%
3641913 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.65 46.0 4.06e-01 77.6% 70.7%
3924553 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.64 50.0 4.14e-01 89.8% 78.9%
5035446 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.64 46.0 4.47e-01 77.6% 89.1%
3722079 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.64 47.0 2.79e-01 81.6% 11.8%
4985100 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 48.0 4.86e-01 85.7% 100.0%
4943272 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 44.0 4.17e-01 71.4% 63.3%
3987436 4333.1.1.1 ↗ a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S 0.63 46.0 2.69e-01 79.6% 29.8%
4623924 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.63 45.0 4.33e-01 75.5% 87.3%
3990001 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.63 42.0 4.19e-01 73.5% 66.0%
4957377 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.63 51.0 4.76e-01 93.9% 84.1%
3588972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 39.0 3.83e-01 77.6% 57.4%
4043931 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.62 45.0 4.28e-01 79.6% 88.3%
None — 0.62 44.0 2.64e-01 75.5% 39.4%
3783976 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.62 52.0 4.28e-01 100.0% 52.2%
5024227 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.82e-01 100.0% 100.0%
4152161 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.61 45.0 2.75e-01 81.6% 59.0%
3882733 3935.1.1.1 ↗ extended segments › 4E-BP2 › 4E-BP2 › 4E-BP2 › eIF_4EBP 0.61 39.0 3.56e-01 73.5% 47.1%
3417954 2.1.1.39 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rbc25 0.61 51.0 3.94e-01 100.0% 60.0%
3280837 3982.1.1.1 ↗ a+b complex topology › lantibiotic self-resistance lipoprotein MlbQ › lantibiotic self-resistance lipoprotein MlbQ › lantibiotic self-resistance lipoprotein MlbQ › DUF2511 0.60 45.0 3.74e-01 81.6% 87.8%
3897880 3935.1.1.1 ↗ extended segments › 4E-BP2 › 4E-BP2 › 4E-BP2 › eIF_4EBP 0.60 39.0 3.77e-01 73.5% 58.2%
4585067 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.60 46.0 3.21e-01 85.7% 70.6%
3715334 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 44.0 2.77e-01 83.7% 13.7%
3988005 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.60 40.0 4.07e-01 71.4% 84.0%
4013485 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 49.0 3.30e-01 93.9% 42.5%
2805 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.59 46.0 3.44e-01 89.8% 45.7%
4953123 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.59 48.0 2.85e-01 93.9% 21.3%
3797728 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 46.0 3.86e-01 91.8% 49.4%
3722316 1.1.1.27 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.59 50.0 2.97e-01 100.0% 85.4%
3384540 2485.1.1.122 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin, Thioredoxin_6 0.58 44.0 2.82e-01 83.7% 35.7%
3499076 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.57 41.0 2.56e-01 79.6% 20.4%
4072958 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.57 41.0 3.83e-01 79.6% 83.1%
5049640 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 41.0 3.68e-01 81.6% 58.2%
3381974 2003.1.2.47 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NDH2_C 0.57 40.0 2.70e-01 79.6% 40.0%
3917795 5.1.4.173 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd 0.56 39.0 2.38e-01 75.5% 19.7%
4928594 221.1.2.20 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4e 0.56 44.0 3.22e-01 98.0% 43.6%
None — 0.56 45.0 2.84e-01 100.0% 95.9%
4500383 316.1.1.26 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › SMODS 0.55 39.0 2.68e-01 71.4% 20.0%
3178127 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.55 43.0 4.37e-01 93.9% 96.0%
3903603 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 45.0 3.99e-01 95.9% 69.3%
3388785 109.1.1.11 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Arc1p_N_like 0.55 43.0 3.16e-01 95.9% 30.9%
2582292 6107.1.1.2 ↗ a+b two layers › a+b domain in platelet binding protein GspB › a+b domain in platelet binding protein GspB › a+b domain in platelet binding protein GspB › aRib 0.55 38.0 3.31e-01 71.4% 64.2%
428210 3243.1.1.1 ↗ alpha complex topology › VopL dimerization domain › VopL dimerization domain › VopL dimerization domain › VCD 0.55 45.0 3.03e-01 100.0% 38.5%
4176722 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.55 39.0 3.30e-01 83.7% 92.0%
3998283 3534.1.1.3 ↗ beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF4505 0.54 41.0 3.48e-01 83.7% 62.4%
5059435 2485.1.1.61 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DCC1-like 0.54 45.0 3.81e-01 100.0% 77.8%
3557694 109.4.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR 0.53 40.0 2.48e-01 89.8% 24.3%
3535695 1021.1.1.2 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.52 36.0 3.14e-01 79.6% 41.1%
3872932 109.4.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR 0.52 40.0 2.30e-01 89.8% 14.4%
3279550 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 35.0 3.78e-01 71.4% 100.0%
3265019 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 38.0 3.16e-01 83.7% 40.8%
3224532 3534.1.1.3 ↗ beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF4505 0.52 42.0 3.56e-01 89.8% 78.3%
4957651 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 41.0 2.79e-01 95.9% 81.3%
3584039 5.1.5.89 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 0.51 36.0 2.19e-01 79.6% 21.8%
3908246 922.1.1.7 ↗ few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_ADAMTS 0.50 34.0 3.30e-01 73.5% 76.7%