←Back to structures
OP068343.1__UVG35130.1__SEA_CECE_79__00079
Bact-VirOP068343.1__UVG35130.1__SEA_CECE_79__00079
Identity
- Accession:
- OP068343 ↗
- Kingdom:
- phage
Quality
67.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-46_61-69
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ff4A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 57.0 | 3.93e-01 | 81.5% | 32.4% |
| 4r0mA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.72 | 54.0 | 4.25e-01 | 79.6% | 62.0% |
| 3kxwA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.72 | 55.0 | 4.16e-01 | 81.5% | 83.9% |
| 5ojcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.69 | 53.0 | 3.85e-01 | 83.3% | 78.6% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.69 | 57.0 | 4.16e-01 | 94.4% | 55.8% |
| 5eufA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.68 | 47.0 | 3.08e-01 | 72.2% | 56.3% |
| 6dcjA02 | 1.25.40.650 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 51.0 | 4.14e-01 | 83.3% | 87.5% |
| 3zheD01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 58.0 | 3.96e-01 | 100.0% | 73.2% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.66 | 50.0 | 3.71e-01 | 83.3% | 82.6% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.66 | 50.0 | 3.78e-01 | 83.3% | 77.7% |
| 6fdmA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.66 | 50.0 | 4.05e-01 | 83.3% | 86.4% |
| 8sorA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.66 | 56.0 | 3.48e-01 | 100.0% | 23.1% |
| 4qflA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.65 | 46.0 | 3.09e-01 | 87.0% | 18.3% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.65 | 48.0 | 4.47e-01 | 83.3% | 80.8% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.65 | 49.0 | 3.28e-01 | 81.5% | 34.7% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.63 | 53.0 | 3.67e-01 | 94.4% | 85.3% |
| 3cx5A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.63 | 47.0 | 3.19e-01 | 83.3% | 72.2% |
| 3lyeA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.63 | 47.0 | 3.01e-01 | 83.3% | 37.9% |
| 2jpnA00 | 1.20.1280.210 | Mainly Alpha › Up-down Bundle › Monooxygenase › Uncharacterised protein UvsW.1 | 0.61 | 45.0 | 4.05e-01 | 81.5% | 65.8% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 46.0 | 3.48e-01 | 85.2% | 91.7% |
| 1ynjJ01 | 1.10.1790.20 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › | 0.60 | 44.0 | 3.59e-01 | 83.3% | 49.1% |
| 3hdiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.59 | 43.0 | 3.05e-01 | 83.3% | 75.8% |
| 4gouA03 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.58 | 47.0 | 3.27e-01 | 92.6% | 63.5% |
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.57 | 50.0 | 3.31e-01 | 100.0% | 96.5% |
| 3oo3A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 51.0 | 3.07e-01 | 100.0% | 50.4% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 39.0 | 2.66e-01 | 72.2% | 60.3% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.52 | 38.0 | 3.20e-01 | 77.8% | 52.1% |
| 3ru0A01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.52 | 40.0 | 2.97e-01 | 83.3% | 63.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3693198 | 109.4.1.1124 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_ANAPC2 | 0.76 | 59.0 | 3.70e-01 | 83.3% | 33.8% |
| 4021075 | 109.4.1.1124 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_ANAPC2 | 0.75 | 58.0 | 3.39e-01 | 83.3% | 20.7% |
| 3387998 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.73 | 56.0 | 4.70e-01 | 83.3% | 71.1% |
| 3628293 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 61.0 | 4.32e-01 | 100.0% | 47.4% |
| 3498187 | 219.1.1.16 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 | 0.70 | 52.0 | 3.44e-01 | 81.5% | 43.0% |
| 4928215 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.67 | 47.0 | 3.93e-01 | 74.1% | 76.8% |
| 3416603 | 109.4.1.1487 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_GCN1_C_2 | 0.64 | 55.0 | 3.50e-01 | 100.0% | 27.6% |
| 3786107 | 109.4.1.1376 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3_assoc_6, HAT_PRP39_N | 0.63 | 52.0 | 3.15e-01 | 100.0% | 34.4% |
| 3606798 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 42.0 | 4.21e-01 | 74.1% | 69.1% |
| 55657 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.62 | 47.0 | 3.94e-01 | 81.5% | 81.1% |
| 3269186 | 109.4.1.171 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3snoRNP10 | 0.61 | 49.0 | 2.83e-01 | 96.3% | 13.6% |
| 4022527 | 2002.1.1.152 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_3 | 0.60 | 50.0 | 2.98e-01 | 96.3% | 76.0% |
| 3888873 | 109.4.1.102 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL | 0.60 | 47.0 | 3.03e-01 | 96.3% | 40.4% |
| 3959325 | 2484.1.1.6 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N | 0.59 | 41.0 | 2.95e-01 | 72.2% | 37.0% |
| 4157508 | 3754.1.1.2 ↗ | alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4,MraY_sig1 | 0.59 | 47.0 | 3.04e-01 | 98.1% | 37.2% |
| 3479452 | 386.1.1.19 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_2 | 0.59 | 52.0 | 4.20e-01 | 100.0% | 89.5% |
| None | — | 0.58 | 45.0 | 2.93e-01 | 85.2% | 20.4% | |
| 3195794 | 7025.1.1.0 ↗ | alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer | 0.56 | 39.0 | 4.11e-01 | 72.2% | 88.0% |