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OP068343.1__UVG35342.1__SEA_CECE_336__00291

Bact-Vir

OP068343.1__UVG35342.1__SEA_CECE_336__00291

Identity

Accession:
OP068343 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-72
PDB
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l97A01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.77 59.0 4.86e-01 89.1% 46.5%
7co7D03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.77 60.0 5.02e-01 94.5% 50.0%
1te0A03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.76 61.0 4.98e-01 94.5% 48.0%
4yo1A03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.76 59.0 4.99e-01 94.5% 50.5%
3qo6A03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.75 60.0 4.87e-01 96.4% 47.1%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 45.0 4.49e-01 100.0% 59.6%
4fgmA03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.71 55.0 4.58e-01 96.4% 46.6%
2kjkA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.69 60.0 5.00e-01 100.0% 59.0%
7w6yA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.69 60.0 5.31e-01 100.0% 74.1%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 45.0 3.62e-01 100.0% 34.9%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.68 54.0 3.40e-01 92.7% 47.6%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.67 44.0 3.74e-01 100.0% 40.7%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 41.0 3.96e-01 100.0% 51.5%
1mknA00 2.20.60.10 Mainly Beta › Single Sheet › Heparin-binding Growth Factor, Midkine; Chain A › Pleiotrophin/Midkine, N-terminal domain 0.67 40.0 3.91e-01 89.1% 54.2%
4jj0B00 2.30.42.60 Mainly Beta › Roll › Pdz3 Domain › 0.66 55.0 3.90e-01 96.4% 29.4%
3n89A02 3.30.310.210 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.66 56.0 4.29e-01 100.0% 96.4%
1y4uB01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.66 50.0 3.46e-01 83.6% 72.7%
3cxgA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 46.0 3.63e-01 83.6% 74.6%
4l2iB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 42.0 2.76e-01 76.4% 52.1%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.59 43.0 3.29e-01 100.0% 32.6%
1efpB00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 42.0 2.79e-01 76.4% 56.5%
2kjpA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.59 48.0 4.35e-01 96.4% 70.9%
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 31.0 3.54e-01 81.8% 85.7%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 35.0 3.88e-01 89.1% 86.8%
1v7pB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.57 45.0 3.58e-01 92.7% 74.0%
4eeeA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 3.63e-01 90.9% 65.2%
2f51A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 43.0 3.58e-01 89.1% 80.2%
2kqrA01 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.56 45.0 4.23e-01 96.4% 82.4%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.56 34.0 3.42e-01 100.0% 58.9%
3emiA00 3.90.1780.10 Alpha Beta › Alpha-Beta Complex › Trimeric adhesin › Trimeric adhesin 0.56 30.0 2.41e-01 81.8% 22.7%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 34.0 3.83e-01 89.1% 91.9%
4bqhA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 43.0 2.56e-01 92.7% 49.5%
3bs4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 44.0 2.94e-01 89.1% 82.9%
5umbA02 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.55 38.0 3.57e-01 98.2% 56.0%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.55 41.0 2.71e-01 81.8% 30.8%
6yiiA01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.55 43.0 3.04e-01 100.0% 76.1%
2qikA01 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.55 42.0 3.45e-01 87.3% 86.4%
3hurA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.55 39.0 2.84e-01 76.4% 29.2%
2gy5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 41.0 3.56e-01 89.1% 64.6%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 46.0 3.02e-01 100.0% 27.5%
6rzqA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.54 38.0 3.50e-01 100.0% 51.8%
2lezA00 3.30.2450.10 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 0.54 38.0 3.06e-01 100.0% 35.0%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.54 35.0 3.02e-01 100.0% 37.8%
4as2A02 1.20.1440.310 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.54 41.0 3.43e-01 87.3% 96.1%
3k1rA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 45.0 3.66e-01 98.2% 82.0%
1v30A00 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.53 40.0 3.29e-01 87.3% 77.1%
4bq6F00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.53 38.0 2.89e-01 80.0% 50.3%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 47.0 3.61e-01 100.0% 50.4%
4gniA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.52 39.0 3.50e-01 100.0% 54.7%
1xfdA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.51 42.0 2.50e-01 94.5% 24.8%
5b55A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 39.0 2.82e-01 89.1% 82.1%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 40.0 3.06e-01 85.5% 41.9%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.51 43.0 3.35e-01 100.0% 80.7%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 40.0 3.03e-01 92.7% 43.9%
4e6xB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 40.0 2.66e-01 98.2% 80.4%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.51 43.0 2.84e-01 100.0% 30.2%
2lstA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 43.0 3.36e-01 100.0% 70.8%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 41.0 3.67e-01 100.0% 66.7%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.51 39.0 3.27e-01 85.5% 61.9%
2be3B01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 41.0 3.09e-01 89.1% 86.7%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.50 37.0 3.01e-01 83.6% 55.2%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.50 44.0 4.02e-01 100.0% 83.8%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3875074 7502.1.1.7 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 0.78 52.0 4.06e-01 100.0% 34.5%
3758538 216.1.1.27 a+b two layers › UBC-like › UBC-like › UBC-like › HGTP_anticodon2 0.78 52.0 3.99e-01 100.0% 33.0%
3166282 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.78 60.0 5.17e-01 89.1% 54.1%
3456496 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.77 47.0 3.63e-01 100.0% 29.6%
4378590 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.77 60.0 4.92e-01 94.5% 45.7%
3965386 2.4.1.6 beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.77 48.0 3.70e-01 100.0% 29.7%
5004009 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.74 62.0 5.43e-01 100.0% 61.2%
5033889 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.74 59.0 4.88e-01 96.4% 49.0%
5024676 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.73 64.0 5.30e-01 100.0% 75.0%
3993677 823.1.1.0 a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW 0.73 53.0 4.95e-01 78.2% 65.7%
4967628 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.73 64.0 5.58e-01 100.0% 68.2%
3988186 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.73 65.0 4.95e-01 100.0% 46.4%
3392130 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.73 48.0 4.60e-01 100.0% 58.5%
3603458 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 57.0 4.74e-01 89.1% 52.0%
135643 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.72 64.0 5.51e-01 100.0% 69.0%
3839715 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.72 55.0 4.90e-01 96.4% 56.5%
3321727 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.72 60.0 5.61e-01 96.4% 81.4%
3253366 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 60.0 4.96e-01 94.5% 65.0%
5000812 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.71 62.0 5.30e-01 100.0% 63.3%
4949343 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.71 62.0 4.73e-01 100.0% 49.2%
5012619 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.71 61.0 5.25e-01 100.0% 67.8%
3700833 2004.1.1.442 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 0.70 50.0 3.58e-01 89.1% 24.6%
4994502 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.70 61.0 5.13e-01 100.0% 71.6%
3660869 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.70 56.0 4.70e-01 89.1% 58.9%
4997114 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.70 62.0 4.61e-01 100.0% 85.7%
5025256 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 45.0 2.71e-01 100.0% 10.0%
135565 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.69 60.0 5.13e-01 100.0% 64.1%
3293552 7518.1.1.1 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.69 53.0 3.89e-01 85.5% 76.5%
5017398 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.68 57.0 4.96e-01 100.0% 60.0%
3879356 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 54.0 4.86e-01 94.5% 63.3%
4030031 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.65 55.0 4.42e-01 96.4% 52.7%
5032977 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 50.0 4.35e-01 100.0% 56.2%
3598125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 42.0 3.84e-01 100.0% 48.0%
3895754 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 51.0 4.07e-01 92.7% 42.6%
5008116 304.24.1.39 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 0.64 52.0 4.47e-01 96.4% 100.0%
3953959 4.1.1.424 beta barrels › SH3 › SH3 › SH3 › PF29823 0.62 39.0 4.03e-01 94.5% 70.0%
3243593 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.62 51.0 4.24e-01 96.4% 87.6%
3889864 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 49.0 4.93e-01 89.1% 89.1%
3250567 331.18.1.4 a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.61 52.0 3.75e-01 100.0% 92.6%
4966910 7518.1.1.6 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_A 0.61 50.0 3.94e-01 92.7% 77.5%
3575581 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.60 41.0 3.02e-01 100.0% 24.2%
136205 7.1.1.5 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.59 48.0 4.29e-01 96.4% 68.7%
3806993 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.57 49.0 3.17e-01 94.5% 36.3%
5057577 1.1.2.16 beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD 0.57 41.0 3.39e-01 78.2% 88.6%
3728186 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 49.0 3.53e-01 100.0% 53.3%
3512850 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.56 50.0 3.72e-01 100.0% 75.4%
4973169 7518.1.1.0 a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like 0.56 43.0 3.68e-01 90.9% 78.0%
3582834 4.1.1.319 beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 0.55 44.0 3.68e-01 89.1% 62.1%
4063634 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.54 41.0 3.28e-01 85.5% 51.6%
5024285 3501.1.1.2 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › DUF2067 0.54 32.0 3.07e-01 96.4% 50.8%
3558235 227.1.1.11 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.54 45.0 3.50e-01 100.0% 62.2%
3399126 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.53 47.0 3.49e-01 100.0% 72.4%
3822590 2008.1.1.77 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C 0.53 42.0 3.52e-01 98.2% 92.2%
5083609 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 45.0 3.61e-01 100.0% 91.7%
5021275 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 46.0 3.72e-01 100.0% 60.0%
4956065 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.52 42.0 3.38e-01 85.5% 100.0%
3821287 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.52 42.0 3.17e-01 92.7% 45.0%
4327466 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.51 38.0 3.98e-01 96.4% 88.0%
3451717 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.51 38.0 3.47e-01 87.3% 72.9%
4355183 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.51 41.0 3.00e-01 89.1% 45.8%
3921728 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.51 32.0 2.56e-01 85.5% 29.6%
3694970 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.51 35.0 2.46e-01 74.5% 34.7%
3272269 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.50 39.0 2.67e-01 89.1% 66.4%