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OP114734.1__UYE95394.1__X__00240

Bact-Vir

OP114734.1__UYE95394.1__X__00240

Identity

Accession:
OP114734 ↗
Kingdom:
phage

Quality

94.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Krischvirus› Escherichia_phage_vB_ESM-pEJ01

TaxID: 2973660

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-63
PDB
Domain cluster: rep: NC_029067.1__YP_009223068.1__VPLG_00219__00219__D2-62
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.62e-01 98.4% 74.3%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 48.0 4.95e-01 100.0% 93.3%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 41.0 4.38e-01 100.0% 84.9%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 43.0 4.30e-01 100.0% 72.7%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 51.0 4.82e-01 100.0% 79.2%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 47.0 4.63e-01 100.0% 80.0%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 47.0 3.84e-01 88.7% 55.5%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 45.0 4.72e-01 100.0% 98.1%
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.58 43.0 4.14e-01 82.3% 98.6%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 50.0 4.95e-01 100.0% 98.5%
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 45.0 3.36e-01 87.1% 65.1%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.32e-01 93.5% 82.0%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 49.0 4.85e-01 100.0% 92.2%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 47.0 3.57e-01 96.8% 71.6%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.11e-01 100.0% 71.8%
4js8A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 47.0 4.20e-01 93.5% 92.1%
3r6aB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 35.0 2.85e-01 77.4% 32.0%
2hczX02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.56 42.0 3.70e-01 87.1% 78.8%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.79e-01 85.5% 28.9%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 45.0 4.47e-01 95.2% 94.0%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 41.0 2.68e-01 85.5% 25.2%
2d7vB00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.54 37.0 2.84e-01 72.6% 59.5%
4z3xA03 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.54 42.0 3.11e-01 90.3% 41.4%
4qwoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 39.0 3.15e-01 85.5% 37.9%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 36.0 3.78e-01 88.7% 78.6%
8aidA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 34.0 2.72e-01 77.4% 30.2%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.53 43.0 3.91e-01 93.5% 86.5%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.52 40.0 3.84e-01 96.8% 71.4%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.73e-01 83.9% 67.5%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 42.0 4.27e-01 90.3% 96.7%
2dhjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.60e-01 100.0% 68.0%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.52 40.0 3.88e-01 88.7% 74.0%
5ygqA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 3.62e-01 100.0% 95.9%
4z24A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 2.73e-01 100.0% 59.2%
2oktA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 34.0 2.81e-01 72.6% 85.2%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.50 42.0 3.03e-01 100.0% 46.6%
1aorA02 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.50 38.0 2.83e-01 87.1% 40.3%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4998329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 46.0 4.82e-01 100.0% 80.0%
3451280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 46.0 3.46e-01 100.0% 31.0%
3993946 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 40.0 4.66e-01 77.4% 100.0%
3264879 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.31e-01 100.0% 67.1%
5037599 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 47.0 3.10e-01 85.5% 30.7%
3247995 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.61 44.0 4.26e-01 100.0% 68.6%
3299665 244.1.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.61 37.0 2.42e-01 82.3% 13.5%
5049906 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 40.0 4.09e-01 85.5% 70.0%
3586469 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.60 47.0 4.31e-01 100.0% 63.5%
3918564 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 52.0 4.92e-01 100.0% 81.3%
3741680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 44.0 4.59e-01 98.4% 89.1%
3395356 5.1.4.338 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF28639 0.60 45.0 2.80e-01 85.5% 18.8%
3579728 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.59 47.0 4.62e-01 100.0% 81.4%
3946613 2003.1.2.7 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.59 38.0 2.81e-01 93.5% 22.2%
598 4.1.1.68 ↗ beta barrels › SH3 › SH3 › SH3 › YorP 0.59 45.0 4.36e-01 100.0% 74.6%
3496824 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.58 46.0 3.99e-01 88.7% 67.0%
4863931 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.20e-01 100.0% 76.1%
3234923 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 47.0 4.72e-01 100.0% 92.1%
3781383 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.01e-01 100.0% 60.0%
3761120 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.57 41.0 4.07e-01 88.7% 73.8%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.57 42.0 4.06e-01 96.8% 71.4%
3843096 5.1.5.76 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N 0.56 43.0 2.78e-01 85.5% 23.1%
4004055 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 42.0 3.12e-01 85.5% 40.0%
3262589 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 45.0 3.68e-01 90.3% 75.8%
4003181 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 45.0 4.63e-01 100.0% 96.7%
4681935 4071.1.1.1 ↗ beta barrels › BH3618-like › BH3618-like › BH3618-like › FliW 0.56 45.0 3.61e-01 100.0% 70.7%
3406633 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 47.0 4.14e-01 100.0% 70.0%
3578382 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 43.0 3.61e-01 83.9% 81.9%
4399169 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.55 37.0 3.83e-01 88.7% 73.3%
3396594 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 40.0 4.08e-01 100.0% 85.0%
4206425 2.1.1.48 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C 0.55 40.0 4.11e-01 79.0% 98.3%
3406663 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 40.0 4.23e-01 91.9% 100.0%
3930536 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 41.0 3.83e-01 82.3% 95.0%
3388273 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 43.0 3.85e-01 88.7% 100.0%
3215500 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 42.0 4.37e-01 96.8% 96.4%
4026595 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.54 44.0 3.97e-01 93.5% 96.6%
4215717 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 41.0 4.07e-01 100.0% 79.7%
3503630 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.62e-01 95.2% 84.3%
4264105 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 44.0 4.25e-01 93.5% 91.4%
3802068 1.1.1.28 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.52 37.0 2.47e-01 80.6% 85.6%
3687406 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.52 40.0 3.72e-01 88.7% 79.8%
3703907 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 39.0 3.93e-01 85.5% 100.0%
4097002 2.1.1.48 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C 0.51 37.0 3.84e-01 77.4% 98.3%
3249203 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.32e-01 83.9% 92.4%
3271894 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.37e-01 83.9% 99.0%
3260566 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.33e-01 83.9% 92.4%
3461962 1.1.1.9 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C 0.51 36.0 2.55e-01 79.0% 82.7%
3704984 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 43.0 2.67e-01 100.0% 89.9%
3819766 244.1.1.11 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.50 43.0 2.57e-01 100.0% 30.6%
3520903 3864.1.1.0 ↗ extended segments › Mitochondrial 54S ribosomal protein L28 › Mitochondrial 54S ribosomal protein L28 › Mitochondrial 54S ribosomal protein L28 0.50 38.0 2.29e-01 85.5% 12.8%