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OP121182.1__UVD31947.1__X__00006

Bact-Vir

OP121182.1__UVD31947.1__X__00006

Identity

Accession:
OP121182 ↗
Kingdom:
phage

Quality

79.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_vB_Va_Val-yong3

TaxID: 2972438

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-107
PDB
Domain cluster: rep: NC_027981.1__YP_009167713.1__APL38_gp06__00006__D10-103
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gqhA01 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.57 50.0 4.57e-01 92.8% 99.2%
7txuA02 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.54 40.0 3.58e-01 78.4% 64.2%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 45.0 3.72e-01 100.0% 80.3%
3f43A01 3.30.750.24 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain 0.50 34.0 3.34e-01 100.0% 62.4%
3tufA00 1.10.287.4300 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like 0.50 35.0 3.34e-01 92.8% 60.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943387 7542.1.2.4 ↗ a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › PF28406 0.66 42.0 4.33e-01 100.0% 66.3%
3984451 327.13.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH 0.51 35.0 3.84e-01 90.7% 90.7%
4270691 2003.1.1.147 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N, F420_oxidored 0.50 40.0 3.18e-01 85.6% 82.1%